RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 AKAP4Q5JQC9 854 aa24.04■■□□□ 1.44
IRF3-202ENST00000377135 KLHL34Q8N239 644 aa24.04■■□□□ 1.44
IRF3-202ENST00000377135 SMIM5Q71RC9 77 aa24.03■■□□□ 1.44
IRF3-202ENST00000377135 QSER1Q2KHR3 1735 aa24.03■■□□□ 1.44
IRF3-202ENST00000377135 PHF14O94880 888 aa24.02■■□□□ 1.44
IRF3-202ENST00000377135 MSL1Q68DK7 614 aa24.02■■□□□ 1.44
IRF3-202ENST00000377135 KDM6AO15550 1401 aaPredicted RBP24.02■■□□□ 1.44
IRF3-202ENST00000377135 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.01■■□□□ 1.43
IRF3-202ENST00000377135 AMIGO3Q86WK7 504 aa24.01■■□□□ 1.43
IRF3-202ENST00000377135 C5P01031 1676 aa24.01■■□□□ 1.43
IRF3-202ENST00000377135 MTHFSDQ2M296 383 aaKnown RBP24.01■■□□□ 1.43
IRF3-202ENST00000377135 SLC4A9Q96Q91 983 aa24.01■■□□□ 1.43
IRF3-202ENST00000377135 LGR6Q9HBX8 967 aa24.01■■□□□ 1.43
IRF3-202ENST00000377135 GNPATO15228 680 aa24■■□□□ 1.43
IRF3-202ENST00000377135 PTCD1O75127 700 aaKnown RBP24■■□□□ 1.43
IRF3-202ENST00000377135 CFAP53Q96M91 514 aa24■■□□□ 1.43
IRF3-202ENST00000377135 SSFA2P28290 1259 aa23.99■■□□□ 1.43
IRF3-202ENST00000377135 TUBGCP6Q96RT7 1819 aa23.98■■□□□ 1.43
IRF3-202ENST00000377135 TAF1LQ8IZX4 1826 aa23.98■■□□□ 1.43
IRF3-202ENST00000377135 MAP3K5Q99683 1374 aa23.97■■□□□ 1.43
IRF3-202ENST00000377135 C4BP0C0L5 1744 aa23.97■■□□□ 1.43
IRF3-202ENST00000377135 RNMTO43148 476 aaKnown RBP23.96■■□□□ 1.43
IRF3-202ENST00000377135 YY1P25490 414 aa23.96■■□□□ 1.43
IRF3-202ENST00000377135 PPP2R1AP30153 589 aa23.96■■□□□ 1.43
IRF3-202ENST00000377135 SLC52A2Q9HAB3 445 aa23.96■■□□□ 1.43
IRF3-202ENST00000377135 TRAPPC3LQ5T215 181 aa23.95■■□□□ 1.42
IRF3-202ENST00000377135 RC3H1Q5TC82 1133 aaKnown RBP23.95■■□□□ 1.42
IRF3-202ENST00000377135 RTCBQ9Y3I0 505 aaKnown RBP23.95■■□□□ 1.42
IRF3-202ENST00000377135 NUDCQ9Y266 331 aa23.94■■□□□ 1.42
IRF3-202ENST00000377135 GPR162Q16538 588 aa23.93■■□□□ 1.42
IRF3-202ENST00000377135 RPS6KA4O75676 772 aa23.91■■□□□ 1.42
IRF3-202ENST00000377135 NLGN2Q8NFZ4 835 aa23.91■■□□□ 1.42
IRF3-202ENST00000377135 COL3A1P02461 1466 aaPredicted RBP23.91■■□□□ 1.42
IRF3-202ENST00000377135 COL24A1Q17RW2 1714 aa23.9■■□□□ 1.42
IRF3-202ENST00000377135 GAS2L2Q8NHY3 880 aa23.9■■□□□ 1.42
IRF3-202ENST00000377135 ARHGEF1Q92888 912 aaKnown RBP23.9■■□□□ 1.42
IRF3-202ENST00000377135 GNAT3A8MTJ3 354 aa23.89■■□□□ 1.41
IRF3-202ENST00000377135 U2AF1L5P0DN76 240 aaPredicted RBP23.89■■□□□ 1.41
IRF3-202ENST00000377135 U2AF1Q01081 240 aaKnown RBP eCLIP23.89■■□□□ 1.41
IRF3-202ENST00000377135 SLC39A6Q13433 755 aa23.89■■□□□ 1.41
IRF3-202ENST00000377135 PELP1Q8IZL8 1130 aaKnown RBP23.89■■□□□ 1.41
IRF3-202ENST00000377135 CD2APQ9Y5K6 639 aa23.89■■□□□ 1.41
IRF3-202ENST00000377135 CNTNAP4Q9C0A0 1308 aa23.88■■□□□ 1.41
IRF3-202ENST00000377135 PHACTR3Q96KR7 559 aa23.88■■□□□ 1.41
IRF3-202ENST00000377135 UBR3Q6ZT12 1888 aa23.87■■□□□ 1.41
IRF3-202ENST00000377135 ADRA2BP18089 450 aa23.87■■□□□ 1.41
IRF3-202ENST00000377135 PRKAR2BP31323 418 aa23.87■■□□□ 1.41
IRF3-202ENST00000377135 RFC4P35249 363 aa23.87■■□□□ 1.41
IRF3-202ENST00000377135 IL17REQ8NFR9 667 aa23.87■■□□□ 1.41
IRF3-202ENST00000377135 CRKLP46109 303 aaKnown RBP23.86■■□□□ 1.41
IRF3-202ENST00000377135 NLGN1Q8N2Q7 840 aa23.86■■□□□ 1.41
IRF3-202ENST00000377135 RSPH6AQ9H0K4 717 aa23.85■■□□□ 1.41
IRF3-202ENST00000377135 SCN11AQ9UI33 1791 aa23.85■■□□□ 1.41
IRF3-202ENST00000377135 FCHSD2O94868 740 aa23.84■■□□□ 1.41
IRF3-202ENST00000377135 TEFQ10587 303 aa23.84■■□□□ 1.41
IRF3-202ENST00000377135 DNAJC10Q8IXB1 793 aa23.84■■□□□ 1.41
IRF3-202ENST00000377135 UTRNP46939 3433 aa23.83■■□□□ 1.41
IRF3-202ENST00000377135 MMP10P09238 476 aa23.83■■□□□ 1.4
IRF3-202ENST00000377135 INTS5Q6P9B9 1019 aaKnown RBP23.83■■□□□ 1.4
IRF3-202ENST00000377135 ZNF831Q5JPB2 1677 aa23.82■■□□□ 1.4
IRF3-202ENST00000377135 TTC5Q8N0Z6 440 aa23.81■■□□□ 1.4
IRF3-202ENST00000377135 CYP19A1P11511 503 aaPredicted RBP23.8■■□□□ 1.4
IRF3-202ENST00000377135 GYS1P13807 737 aa23.8■■□□□ 1.4
IRF3-202ENST00000377135 CCDC87Q9NVE4 849 aa23.8■■□□□ 1.4
IRF3-202ENST00000377135 DDX10Q13206 875 aaKnown RBP23.79■■□□□ 1.4
IRF3-202ENST00000377135 VSIG10Q8N0Z9 540 aa23.79■■□□□ 1.4
IRF3-202ENST00000377135 GRIN3BO60391 1043 aa23.78■■□□□ 1.4
IRF3-202ENST00000377135 YBX3P16989 372 aaKnown RBP eCLIP23.77■■□□□ 1.4
IRF3-202ENST00000377135 RTF1Q92541 710 aaKnown RBP23.77■■□□□ 1.4
IRF3-202ENST00000377135 MYH14Q7Z406 1995 aaKnown RBP23.77■■□□□ 1.4
IRF3-202ENST00000377135 ZNF790Q6PG37 636 aa23.76■■□□□ 1.39
IRF3-202ENST00000377135 SRP68Q9UHB9 627 aaKnown RBP23.76■■□□□ 1.39
IRF3-202ENST00000377135 MRC1P22897 1456 aa23.76■■□□□ 1.39
IRF3-202ENST00000377135 COL5A3P25940 1745 aaPredicted RBP23.75■■□□□ 1.39
IRF3-202ENST00000377135 STARD3NLO95772 234 aa23.75■■□□□ 1.39
IRF3-202ENST00000377135 ZNF496Q96IT1 587 aaPredicted RBP23.75■■□□□ 1.39
IRF3-202ENST00000377135 PARP3Q9Y6F1 533 aa23.75■■□□□ 1.39
IRF3-202ENST00000377135 BTBD11A6QL63 1104 aa23.74■■□□□ 1.39
IRF3-202ENST00000377135 ZPR1O75312 459 aa23.74■■□□□ 1.39
IRF3-202ENST00000377135 NEFMP07197 916 aa23.74■■□□□ 1.39
IRF3-202ENST00000377135 RALBP1Q15311 655 aa23.73■■□□□ 1.39
IRF3-202ENST00000377135 TEX13AQ9BXU3 409 aaPredicted RBP23.73■■□□□ 1.39
IRF3-202ENST00000377135 GOLGB1Q14789 3259 aaKnown RBP23.72■■□□□ 1.39
IRF3-202ENST00000377135 ADAMTS7Q9UKP4 1686 aa23.72■■□□□ 1.39
IRF3-202ENST00000377135 USP42Q9H9J4 1324 aaKnown RBP23.72■■□□□ 1.39
IRF3-202ENST00000377135 FKBP8Q14318 412 aa23.72■■□□□ 1.39
IRF3-202ENST00000377135 MCM10Q7L590 875 aa23.72■■□□□ 1.39
IRF3-202ENST00000377135 CEMIPQ8WUJ3 1361 aa23.71■■□□□ 1.39
IRF3-202ENST00000377135 SOS1Q07889 1333 aaPredicted RBP23.71■■□□□ 1.39
IRF3-202ENST00000377135 HTATSF1O43719 755 aaKnown RBP23.71■■□□□ 1.39
IRF3-202ENST00000377135 CANXP27824 592 aaKnown RBP23.71■■□□□ 1.39
IRF3-202ENST00000377135 WWC3Q9ULE0 1092 aa23.71■■□□□ 1.39
IRF3-202ENST00000377135 ZBTB1Q9Y2K1 713 aa23.71■■□□□ 1.39
IRF3-202ENST00000377135 ZNF784Q8NCA9 323 aaPredicted RBP23.7■■□□□ 1.38
IRF3-202ENST00000377135 FMNL2Q96PY5 1086 aa23.7■■□□□ 1.38
IRF3-202ENST00000377135 KCPQ6ZWJ8 1503 aa23.7■■□□□ 1.38
IRF3-202ENST00000377135 KCNQ3O43525 872 aa23.69■■□□□ 1.38
IRF3-202ENST00000377135 TGFB2P61812 414 aa23.69■■□□□ 1.38
IRF3-202ENST00000377135 DCTN1Q14203 1278 aa23.69■■□□□ 1.38
IRF3-202ENST00000377135 USPL1Q5W0Q7 1092 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms