RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 F6X3S4 739 aa16.32■□□□□ 0.2
TRIM40-206ENST00000376724 PHKG2P15735 406 aa16.32■□□□□ 0.2
TRIM40-206ENST00000376724 EVA1CP58658 441 aa16.32■□□□□ 0.2
TRIM40-206ENST00000376724 HDAC1Q13547 482 aaPredicted RBP16.32■□□□□ 0.2
TRIM40-206ENST00000376724 SLC4A10Q6U841 1118 aa16.32■□□□□ 0.2
TRIM40-206ENST00000376724 INTS3Q68E01 1043 aaKnown RBP16.31■□□□□ 0.2
TRIM40-206ENST00000376724 IFNL2Q8IZJ0 200 aa16.31■□□□□ 0.2
TRIM40-206ENST00000376724 ABCA3Q99758 1704 aa16.31■□□□□ 0.2
TRIM40-206ENST00000376724 SOS1Q07889 1333 aaPredicted RBP16.31■□□□□ 0.2
TRIM40-206ENST00000376724 ROBO1Q9Y6N7 1651 aa16.31■□□□□ 0.2
TRIM40-206ENST00000376724 FLIIQ13045 1269 aa16.31■□□□□ 0.2
TRIM40-206ENST00000376724 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.31■□□□□ 0.2
TRIM40-206ENST00000376724 VIRMAQ69YN4 1812 aaKnown RBP16.31■□□□□ 0.2
TRIM40-206ENST00000376724 FKBP5Q13451 457 aaPredicted RBP16.3■□□□□ 0.2
TRIM40-206ENST00000376724 BACH2Q9BYV9 841 aa16.3■□□□□ 0.2
TRIM40-206ENST00000376724 COL5A2P05997 1499 aaPredicted RBP16.3■□□□□ 0.2
TRIM40-206ENST00000376724 LTBP4Q8N2S1 1624 aa16.3■□□□□ 0.2
TRIM40-206ENST00000376724 KDM3BQ7LBC6 1761 aa16.3■□□□□ 0.2
TRIM40-206ENST00000376724 CYP27B1O15528 508 aa16.29■□□□□ 0.2
TRIM40-206ENST00000376724 OVOS2A0A0G2JMS6 1433 aa16.29■□□□□ 0.2
TRIM40-206ENST00000376724 LARP1Q6PKG0 1096 aaKnown RBP16.29■□□□□ 0.2
TRIM40-206ENST00000376724 NFATC2IPQ8NCF5 419 aa16.28■□□□□ 0.2
TRIM40-206ENST00000376724 KDM6AO15550 1401 aaPredicted RBP16.28■□□□□ 0.2
TRIM40-206ENST00000376724 PHAXQ9H814 394 aaKnown RBP16.28■□□□□ 0.2
TRIM40-206ENST00000376724 USP35Q9P2H5 1018 aa16.28■□□□□ 0.2
TRIM40-206ENST00000376724 SLC39A6Q13433 755 aa16.27■□□□□ 0.2
TRIM40-206ENST00000376724 SLC52A2Q9HAB3 445 aa16.27■□□□□ 0.2
TRIM40-206ENST00000376724 CHPF2Q9P2E5 772 aa16.27■□□□□ 0.2
TRIM40-206ENST00000376724 PRAMEF22A3QJZ6 481 aa16.26■□□□□ 0.19
TRIM40-206ENST00000376724 HOXB7P09629 217 aa16.26■□□□□ 0.19
TRIM40-206ENST00000376724 DCAF5Q96JK2 942 aa16.26■□□□□ 0.19
TRIM40-206ENST00000376724 MEIS3Q99687 375 aa16.26■□□□□ 0.19
TRIM40-206ENST00000376724 CARD10Q9BWT7 1032 aa16.26■□□□□ 0.19
TRIM40-206ENST00000376724 BTG4Q9NY30 223 aa16.26■□□□□ 0.19
TRIM40-206ENST00000376724 ANXA1P04083 346 aa16.25■□□□□ 0.19
TRIM40-206ENST00000376724 CCT4P50991 539 aaKnown RBP16.25■□□□□ 0.19
TRIM40-206ENST00000376724 PIP4K2BP78356 416 aa16.25■□□□□ 0.19
TRIM40-206ENST00000376724 SIRT2Q8IXJ6 389 aa16.25■□□□□ 0.19
TRIM40-206ENST00000376724 SMC5Q8IY18 1101 aa16.25■□□□□ 0.19
TRIM40-206ENST00000376724 ZCRB1Q8TBF4 217 aaKnown RBP16.25■□□□□ 0.19
TRIM40-206ENST00000376724 GIGYF1O75420 1035 aaPredicted RBP16.24■□□□□ 0.19
TRIM40-206ENST00000376724 IL2RBP14784 551 aa16.24■□□□□ 0.19
TRIM40-206ENST00000376724 FAM161AQ3B820 660 aa16.24■□□□□ 0.19
TRIM40-206ENST00000376724 NPM2Q86SE8 214 aaKnown RBP16.24■□□□□ 0.19
TRIM40-206ENST00000376724 ADAMTS7Q9UKP4 1686 aa16.24■□□□□ 0.19
TRIM40-206ENST00000376724 HSP90AB1P08238 724 aaKnown RBP16.24■□□□□ 0.19
TRIM40-206ENST00000376724 ZNF790Q6PG37 636 aa16.24■□□□□ 0.19
TRIM40-206ENST00000376724 SIPA1L3O60292 1781 aaPredicted RBP16.24■□□□□ 0.19
TRIM40-206ENST00000376724 SCN11AQ9UI33 1791 aa16.24■□□□□ 0.19
TRIM40-206ENST00000376724 PKD1L3Q7Z443 1732 aa16.23■□□□□ 0.19
TRIM40-206ENST00000376724 DDX54Q8TDD1 881 aaKnown RBP16.23■□□□□ 0.19
TRIM40-206ENST00000376724 CHMP4AQ9BY43 222 aa16.23■□□□□ 0.19
TRIM40-206ENST00000376724 CABP4P57796 275 aa16.23■□□□□ 0.19
TRIM40-206ENST00000376724 C8orf34Q49A92 452 aa16.23■□□□□ 0.19
TRIM40-206ENST00000376724 PCDH11XQ9BZA7 1347 aa16.23■□□□□ 0.19
TRIM40-206ENST00000376724 PCDH11YQ9BZA8 1340 aa16.23■□□□□ 0.19
TRIM40-206ENST00000376724 AHDC1Q5TGY3 1603 aaPredicted RBP16.22■□□□□ 0.19
TRIM40-206ENST00000376724 PLEKHG2Q9H7P9 1386 aa16.22■□□□□ 0.19
TRIM40-206ENST00000376724 PARP4Q9UKK3 1724 aaKnown RBP16.21■□□□□ 0.19
TRIM40-206ENST00000376724 LNPKQ9C0E8 428 aa16.21■□□□□ 0.19
TRIM40-206ENST00000376724 DBF4Q9UBU7 674 aaPredicted RBP16.21■□□□□ 0.19
TRIM40-206ENST00000376724 HEG1Q9ULI3 1381 aa16.21■□□□□ 0.19
TRIM40-206ENST00000376724 ANKRD45Q5TZF3 282 aa16.21■□□□□ 0.18
TRIM40-206ENST00000376724 TTC5Q8N0Z6 440 aa16.21■□□□□ 0.18
TRIM40-206ENST00000376724 GCC1Q96CN9 775 aa16.21■□□□□ 0.18
TRIM40-206ENST00000376724 CACNA1FO60840 1977 aa16.21■□□□□ 0.18
TRIM40-206ENST00000376724 NUCB1Q02818 461 aa16.2■□□□□ 0.18
TRIM40-206ENST00000376724 TOM1O60784 492 aa16.19■□□□□ 0.18
TRIM40-206ENST00000376724 ADAMTS2O95450 1211 aa16.19■□□□□ 0.18
TRIM40-206ENST00000376724 ANP32AP39687 249 aaKnown RBP16.19■□□□□ 0.18
TRIM40-206ENST00000376724 PROSER3Q2NL68 480 aa16.19■□□□□ 0.18
TRIM40-206ENST00000376724 CEP85Q6P2H3 762 aa16.19■□□□□ 0.18
TRIM40-206ENST00000376724 CHD1LQ86WJ1 897 aa16.19■□□□□ 0.18
TRIM40-206ENST00000376724 ZNF496Q96IT1 587 aaPredicted RBP16.19■□□□□ 0.18
TRIM40-206ENST00000376724 PI4KAP2A4QPH2 592 aa16.19■□□□□ 0.18
TRIM40-206ENST00000376724 ANKRD44Q8N8A2 993 aa16.19■□□□□ 0.18
TRIM40-206ENST00000376724 PI4KAP1Q8N8J0 262 aa16.19■□□□□ 0.18
TRIM40-206ENST00000376724 RPAP2Q8IXW5 612 aaPredicted RBP16.18■□□□□ 0.18
TRIM40-206ENST00000376724 ATP10DQ9P241 1426 aa16.18■□□□□ 0.18
TRIM40-206ENST00000376724 PHLPP1O60346 1717 aa16.17■□□□□ 0.18
TRIM40-206ENST00000376724 NUTM2BA6NNL0 878 aaPredicted RBP16.17■□□□□ 0.18
TRIM40-206ENST00000376724 NUTM2EB1AL46 878 aaPredicted RBP16.17■□□□□ 0.18
TRIM40-206ENST00000376724 NUTM2AQ8IVF1 878 aaPredicted RBP16.17■□□□□ 0.18
TRIM40-206ENST00000376724 MRC1P22897 1456 aa16.16■□□□□ 0.18
TRIM40-206ENST00000376724 GNAI2P04899 355 aa16.16■□□□□ 0.18
TRIM40-206ENST00000376724 DNAAF4Q8WXU2 420 aa16.16■□□□□ 0.18
TRIM40-206ENST00000376724 COL14A1Q05707 1796 aaKnown RBP16.16■□□□□ 0.18
TRIM40-206ENST00000376724 GNAI3P08754 354 aa16.16■□□□□ 0.18
TRIM40-206ENST00000376724 MYL6BP14649 208 aa16.16■□□□□ 0.18
TRIM40-206ENST00000376724 AIMP1Q12904 312 aaKnown RBP16.16■□□□□ 0.18
TRIM40-206ENST00000376724 FMNL2Q96PY5 1086 aa16.16■□□□□ 0.18
TRIM40-206ENST00000376724 SRCIN1Q9C0H9 1055 aa16.16■□□□□ 0.18
TRIM40-206ENST00000376724 COL22A1Q8NFW1 1626 aaPredicted RBP16.15■□□□□ 0.18
TRIM40-206ENST00000376724 SNRPA1P09661 255 aaKnown RBP16.15■□□□□ 0.18
TRIM40-206ENST00000376724 DCTPP1Q9H773 170 aa16.15■□□□□ 0.18
TRIM40-206ENST00000376724 HYPKQ9NX55 129 aa16.15■□□□□ 0.18
TRIM40-206ENST00000376724 UBAP1LF5GYI3 381 aa16.14■□□□□ 0.17
TRIM40-206ENST00000376724 APBB1O00213 710 aa16.14■□□□□ 0.17
TRIM40-206ENST00000376724 USP44Q9H0E7 712 aa16.14■□□□□ 0.17
TRIM40-206ENST00000376724 DDX21Q9NR30 783 aaKnown RBP eCLIP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms