RNA–Protein interactions for RNA: ENST00000376618.6

CPT1A-202, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-202ENST00000376618 CHAMP1Q96JM3 812 aa17.37■□□□□ 0.37
CPT1A-202ENST00000376618 FMN2Q9NZ56 1722 aa17.37■□□□□ 0.37
CPT1A-202ENST00000376618 CHPF2Q9P2E5 772 aa17.36■□□□□ 0.37
CPT1A-202ENST00000376618 CHMP5Q9NZZ3 219 aa17.36■□□□□ 0.37
CPT1A-202ENST00000376618 CCDC30Q5VVM6 783 aa17.35■□□□□ 0.37
CPT1A-202ENST00000376618 USP44Q9H0E7 712 aa17.35■□□□□ 0.37
CPT1A-202ENST00000376618 GNAI2P04899 355 aa17.35■□□□□ 0.37
CPT1A-202ENST00000376618 NBPF7P0C2Y1 421 aaPredicted RBP17.35■□□□□ 0.37
CPT1A-202ENST00000376618 UNC5CLQ8IV45 518 aa17.35■□□□□ 0.37
CPT1A-202ENST00000376618 TNPO1Q92973 898 aaKnown RBP17.35■□□□□ 0.37
CPT1A-202ENST00000376618 MAP3K5Q99683 1374 aa17.35■□□□□ 0.37
CPT1A-202ENST00000376618 NWD1Q149M9 1564 aa17.35■□□□□ 0.37
CPT1A-202ENST00000376618 DTNBO60941 627 aa17.34■□□□□ 0.37
CPT1A-202ENST00000376618 PKP1Q13835 747 aa17.34■□□□□ 0.37
CPT1A-202ENST00000376618 NOL8Q76FK4 1167 aaKnown RBP17.34■□□□□ 0.37
CPT1A-202ENST00000376618 NUTM1Q86Y26 1132 aa17.34■□□□□ 0.37
CPT1A-202ENST00000376618 CABLES1Q8TDN4 633 aa17.34■□□□□ 0.37
CPT1A-202ENST00000376618 IP6K1Q92551 441 aa17.34■□□□□ 0.37
CPT1A-202ENST00000376618 RILPL2Q969X0 211 aa17.34■□□□□ 0.37
CPT1A-202ENST00000376618 GCP02774 474 aa17.34■□□□□ 0.37
CPT1A-202ENST00000376618 PDE1AP54750 535 aa17.34■□□□□ 0.37
CPT1A-202ENST00000376618 PROSER3Q2NL68 480 aa17.34■□□□□ 0.37
CPT1A-202ENST00000376618 USP26Q9BXU7 913 aa17.34■□□□□ 0.37
CPT1A-202ENST00000376618 ZNF530Q6P9A1 599 aaPredicted RBP17.33■□□□□ 0.36
CPT1A-202ENST00000376618 PIP4K2AP48426 406 aaPredicted RBP17.33■□□□□ 0.36
CPT1A-202ENST00000376618 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.36
CPT1A-202ENST00000376618 MARF1Q9Y4F3 1742 aaKnown RBP17.32■□□□□ 0.36
CPT1A-202ENST00000376618 PI4KAP2A4QPH2 592 aa17.32■□□□□ 0.36
CPT1A-202ENST00000376618 SSFA2P28290 1259 aa17.32■□□□□ 0.36
CPT1A-202ENST00000376618 FOXD4L5Q5VV16 416 aaPredicted RBP17.32■□□□□ 0.36
CPT1A-202ENST00000376618 PI4KAP1Q8N8J0 262 aa17.32■□□□□ 0.36
CPT1A-202ENST00000376618 FOXD4L4Q8WXT5 416 aaPredicted RBP17.32■□□□□ 0.36
CPT1A-202ENST00000376618 IL25Q9H293 177 aa17.32■□□□□ 0.36
CPT1A-202ENST00000376618 TRIM6-TRIM34B2RNG4 842 aa17.32■□□□□ 0.36
CPT1A-202ENST00000376618 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
CPT1A-202ENST00000376618 PANK2Q9BZ23 570 aa17.32■□□□□ 0.36
CPT1A-202ENST00000376618 RGPD2P0DJD1 1756 aa17.32■□□□□ 0.36
CPT1A-202ENST00000376618 XRN1Q8IZH2 1706 aaKnown RBP17.31■□□□□ 0.36
CPT1A-202ENST00000376618 TRAK2O60296 914 aa17.31■□□□□ 0.36
CPT1A-202ENST00000376618 BTBD11A6QL63 1104 aa17.31■□□□□ 0.36
CPT1A-202ENST00000376618 DDIT3P35638 169 aa17.31■□□□□ 0.36
CPT1A-202ENST00000376618 K7ELQ4 463 aaPredicted RBP17.3■□□□□ 0.36
CPT1A-202ENST00000376618 EIF4A1P60842 406 aaKnown RBP17.3■□□□□ 0.36
CPT1A-202ENST00000376618 SLC39A6Q13433 755 aa17.3■□□□□ 0.36
CPT1A-202ENST00000376618 ZGPATQ8N5A5 531 aaKnown RBP17.3■□□□□ 0.36
CPT1A-202ENST00000376618 AIMP1Q12904 312 aaKnown RBP17.29■□□□□ 0.36
CPT1A-202ENST00000376618 SNX21Q969T3 373 aa17.29■□□□□ 0.36
CPT1A-202ENST00000376618 TEFQ10587 303 aa17.29■□□□□ 0.36
CPT1A-202ENST00000376618 PPP1R42Q7Z4L9 355 aa17.29■□□□□ 0.36
CPT1A-202ENST00000376618 HMMRO75330 724 aa17.28■□□□□ 0.36
CPT1A-202ENST00000376618 UBTFL1P0CB47 393 aaPredicted RBP17.28■□□□□ 0.36
CPT1A-202ENST00000376618 PROSER2Q86WR7 435 aaPredicted RBP17.28■□□□□ 0.36
CPT1A-202ENST00000376618 ANKRD24Q8TF21 1146 aa17.28■□□□□ 0.36
CPT1A-202ENST00000376618 LRRCC1Q9C099 1032 aa17.28■□□□□ 0.36
CPT1A-202ENST00000376618 KIF24Q5T7B8 1368 aa17.28■□□□□ 0.36
CPT1A-202ENST00000376618 JARID2Q92833 1246 aaPredicted RBP17.28■□□□□ 0.36
CPT1A-202ENST00000376618 PALD1Q9ULE6 856 aa17.28■□□□□ 0.36
CPT1A-202ENST00000376618 SURF6O75683 361 aaKnown RBP17.27■□□□□ 0.36
CPT1A-202ENST00000376618 ATP8B2P98198 1209 aa17.27■□□□□ 0.36
CPT1A-202ENST00000376618 CWF19L2Q2TBE0 894 aaKnown RBP17.27■□□□□ 0.36
CPT1A-202ENST00000376618 LTN1O94822 1766 aa17.27■□□□□ 0.36
CPT1A-202ENST00000376618 LARP6Q9BRS8 491 aaKnown RBP17.27■□□□□ 0.35
CPT1A-202ENST00000376618 CHRNA2Q15822 529 aa17.26■□□□□ 0.35
CPT1A-202ENST00000376618 ANKARQ7Z5J8 1434 aa17.26■□□□□ 0.35
CPT1A-202ENST00000376618 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
CPT1A-202ENST00000376618 MX1P20591 662 aa17.26■□□□□ 0.35
CPT1A-202ENST00000376618 PXDNQ92626 1479 aa17.26■□□□□ 0.35
CPT1A-202ENST00000376618 SOS1Q07889 1333 aaPredicted RBP17.26■□□□□ 0.35
CPT1A-202ENST00000376618 HTATSF1O43719 755 aaKnown RBP17.25■□□□□ 0.35
CPT1A-202ENST00000376618 KRT28Q7Z3Y7 464 aa17.25■□□□□ 0.35
CPT1A-202ENST00000376618 PA2G4Q9UQ80 394 aaKnown RBP17.25■□□□□ 0.35
CPT1A-202ENST00000376618 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.25■□□□□ 0.35
CPT1A-202ENST00000376618 ARHGEF25Q86VW2 580 aa17.24■□□□□ 0.35
CPT1A-202ENST00000376618 GNAI3P08754 354 aa17.24■□□□□ 0.35
CPT1A-202ENST00000376618 XRCC6P12956 609 aaKnown RBP eCLIP17.24■□□□□ 0.35
CPT1A-202ENST00000376618 FOXD4L6Q3SYB3 417 aaPredicted RBP17.24■□□□□ 0.35
CPT1A-202ENST00000376618 FOXD4L3Q6VB84 417 aaPredicted RBP17.24■□□□□ 0.35
CPT1A-202ENST00000376618 SRCIN1Q9C0H9 1055 aa17.24■□□□□ 0.35
CPT1A-202ENST00000376618 ANO2Q9NQ90 1003 aa17.23■□□□□ 0.35
CPT1A-202ENST00000376618 NCOA3Q9Y6Q9 1424 aa17.23■□□□□ 0.35
CPT1A-202ENST00000376618 UPF3BQ9BZI7 483 aaKnown RBP17.23■□□□□ 0.35
CPT1A-202ENST00000376618 RAB3GAP1Q15042 981 aa17.22■□□□□ 0.35
CPT1A-202ENST00000376618 NLRP2Q9NX02 1062 aa17.22■□□□□ 0.35
CPT1A-202ENST00000376618 RNMTO43148 476 aaKnown RBP17.22■□□□□ 0.35
CPT1A-202ENST00000376618 MYL6BP14649 208 aa17.22■□□□□ 0.35
CPT1A-202ENST00000376618 CEMIPQ8WUJ3 1361 aa17.22■□□□□ 0.35
CPT1A-202ENST00000376618 CHD2O14647 1828 aaKnown RBP17.21■□□□□ 0.35
CPT1A-202ENST00000376618 ERC2O15083 957 aa17.21■□□□□ 0.35
CPT1A-202ENST00000376618 NEK4P51957 841 aa17.21■□□□□ 0.35
CPT1A-202ENST00000376618 TPRNQ4KMQ1 711 aa17.21■□□□□ 0.35
CPT1A-202ENST00000376618 C1orf141Q5JVX7 400 aa17.21■□□□□ 0.35
CPT1A-202ENST00000376618 BEND3Q5T5X7 828 aa17.21■□□□□ 0.35
CPT1A-202ENST00000376618 GAS2L3Q86XJ1 694 aa17.21■□□□□ 0.35
CPT1A-202ENST00000376618 DNAAF4Q8WXU2 420 aa17.21■□□□□ 0.35
CPT1A-202ENST00000376618 MAP3K2Q9Y2U5 619 aa17.21■□□□□ 0.35
CPT1A-202ENST00000376618 SALL3Q9BXA9 1300 aa17.21■□□□□ 0.35
CPT1A-202ENST00000376618 HSPA2P54652 639 aa17.21■□□□□ 0.35
CPT1A-202ENST00000376618 KLHDC4Q8TBB5 520 aa17.21■□□□□ 0.35
CPT1A-202ENST00000376618 AKAP4Q5JQC9 854 aa17.2■□□□□ 0.34
CPT1A-202ENST00000376618 KCNH5Q8NCM2 988 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms