RNA–Protein interactions for RNA: ENST00000376590.8

MTHFR-204, Transcript of methylenetetrahydrofolate reductase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MTHFR, Length 7,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-204ENST00000376590 INCENPQ9NQS7 918 aa13.64□□□□□ -0.23
MTHFR-204ENST00000376590 MYOM3Q5VTT5 1437 aa13.64□□□□□ -0.23
MTHFR-204ENST00000376590 PUS7Q96PZ0 661 aaKnown RBP13.64□□□□□ -0.23
MTHFR-204ENST00000376590 BOLA2Q9H3K6 86 aa13.64□□□□□ -0.23
MTHFR-204ENST00000376590 GRPEL1Q9HAV7 217 aa13.63□□□□□ -0.23
MTHFR-204ENST00000376590 SMARCA5O60264 1052 aaPredicted RBP13.63□□□□□ -0.23
MTHFR-204ENST00000376590 WDHD1O75717 1129 aaPredicted RBP13.63□□□□□ -0.23
MTHFR-204ENST00000376590 GRM1Q13255 1194 aa13.63□□□□□ -0.23
MTHFR-204ENST00000376590 TSG101Q99816 390 aa13.63□□□□□ -0.23
MTHFR-204ENST00000376590 DNAI2Q9GZS0 605 aa13.63□□□□□ -0.23
MTHFR-204ENST00000376590 LARP1Q6PKG0 1096 aaKnown RBP13.63□□□□□ -0.23
MTHFR-204ENST00000376590 CTNNA2P26232 953 aa13.63□□□□□ -0.23
MTHFR-204ENST00000376590 NBPF1Q3BBV0 1214 aa13.63□□□□□ -0.23
MTHFR-204ENST00000376590 MYD88Q99836 296 aa13.63□□□□□ -0.23
MTHFR-204ENST00000376590 SERPINA10Q9UK55 444 aa13.63□□□□□ -0.23
MTHFR-204ENST00000376590 CPLX3Q8WVH0 158 aa13.63□□□□□ -0.23
MTHFR-204ENST00000376590 ZNF444Q8N0Y2 327 aaPredicted RBP13.62□□□□□ -0.23
MTHFR-204ENST00000376590 CCDC150Q8NCX0 1101 aa13.62□□□□□ -0.23
MTHFR-204ENST00000376590 IFFO1Q0D2I5 559 aa13.62□□□□□ -0.23
MTHFR-204ENST00000376590 CRACR2AQ9BSW2 395 aa13.62□□□□□ -0.23
MTHFR-204ENST00000376590 RRBP1Q9P2E9 1410 aaKnown RBP13.62□□□□□ -0.23
MTHFR-204ENST00000376590 USP8P40818 1118 aa13.62□□□□□ -0.23
MTHFR-204ENST00000376590 ATF7IPQ6VMQ6 1270 aa13.62□□□□□ -0.23
MTHFR-204ENST00000376590 THEMISQ8N1K5 641 aaPredicted RBP13.62□□□□□ -0.23
MTHFR-204ENST00000376590 NAPBQ9H115 298 aa13.62□□□□□ -0.23
MTHFR-204ENST00000376590 SYCE3A1L190 88 aa13.62□□□□□ -0.23
MTHFR-204ENST00000376590 FKBP15Q5T1M5 1219 aa13.62□□□□□ -0.23
MTHFR-204ENST00000376590 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
MTHFR-204ENST00000376590 FERMT2Q96AC1 680 aa13.62□□□□□ -0.23
MTHFR-204ENST00000376590 BRD4O60885 1362 aaPredicted RBP13.62□□□□□ -0.23
MTHFR-204ENST00000376590 USHBP1Q8N6Y0 703 aa13.62□□□□□ -0.23
MTHFR-204ENST00000376590 CUL5Q93034 780 aa13.62□□□□□ -0.23
MTHFR-204ENST00000376590 LARP6Q9BRS8 491 aaKnown RBP13.62□□□□□ -0.23
MTHFR-204ENST00000376590 ECM2O94769 699 aaPredicted RBP13.62□□□□□ -0.23
MTHFR-204ENST00000376590 IL27Q8NEV9 243 aa13.62□□□□□ -0.23
MTHFR-204ENST00000376590 VAT1LQ9HCJ6 419 aa13.62□□□□□ -0.23
MTHFR-204ENST00000376590 FYCO1Q9BQS8 1478 aa13.61□□□□□ -0.23
MTHFR-204ENST00000376590 STAMBPO95630 424 aa13.61□□□□□ -0.23
MTHFR-204ENST00000376590 TMCO3Q6UWJ1 677 aa13.61□□□□□ -0.23
MTHFR-204ENST00000376590 CCDC144CPQ8IYA2 1237 aa13.61□□□□□ -0.23
MTHFR-204ENST00000376590 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.61□□□□□ -0.23
MTHFR-204ENST00000376590 LUZP1Q86V48 1076 aa13.61□□□□□ -0.23
MTHFR-204ENST00000376590 CEP63Q96MT8 703 aa13.61□□□□□ -0.23
MTHFR-204ENST00000376590 ZNF287Q9HBT7 754 aa13.61□□□□□ -0.23
MTHFR-204ENST00000376590 PUF60Q9UHX1 559 aaKnown RBP13.61□□□□□ -0.23
MTHFR-204ENST00000376590 ZNF652Q9Y2D9 606 aa13.61□□□□□ -0.23
MTHFR-204ENST00000376590 TDRD12Q587J7 1177 aaKnown RBP13.61□□□□□ -0.23
MTHFR-204ENST00000376590 TMOD3Q9NYL9 352 aa13.61□□□□□ -0.23
MTHFR-204ENST00000376590 CASQ1P31415 396 aa13.61□□□□□ -0.23
MTHFR-204ENST00000376590 PPP6R1Q9UPN7 881 aa13.61□□□□□ -0.23
MTHFR-204ENST00000376590 KRT32Q14532 448 aa13.61□□□□□ -0.23
MTHFR-204ENST00000376590 MAP3K11Q16584 847 aa13.61□□□□□ -0.23
MTHFR-204ENST00000376590 PRPF40BQ6NWY9 871 aaKnown RBP13.6□□□□□ -0.23
MTHFR-204ENST00000376590 HOOK3Q86VS8 718 aa13.6□□□□□ -0.23
MTHFR-204ENST00000376590 RPGRQ92834 1020 aaKnown RBP13.6□□□□□ -0.23
MTHFR-204ENST00000376590 MMRN2Q9H8L6 949 aa13.6□□□□□ -0.23
MTHFR-204ENST00000376590 RUSC2Q8N2Y8 1516 aa13.6□□□□□ -0.23
MTHFR-204ENST00000376590 TICAM2Q86XR7 235 aa13.6□□□□□ -0.23
MTHFR-204ENST00000376590 RTEL1-TNFRSF6BF6WH68 1400 aa13.6□□□□□ -0.23
MTHFR-204ENST00000376590 MVPQ14764 893 aaKnown RBP13.6□□□□□ -0.23
MTHFR-204ENST00000376590 UBXN4Q92575 508 aa13.6□□□□□ -0.23
MTHFR-204ENST00000376590 ZSCAN31Q96LW9 406 aaPredicted RBP13.6□□□□□ -0.23
MTHFR-204ENST00000376590 IFIT1P09914 478 aaKnown RBP13.6□□□□□ -0.23
MTHFR-204ENST00000376590 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
MTHFR-204ENST00000376590 AKNAQ7Z591 1439 aa13.6□□□□□ -0.23
MTHFR-204ENST00000376590 MCM10Q7L590 875 aa13.6□□□□□ -0.23
MTHFR-204ENST00000376590 ANKRD50Q9ULJ7 1429 aa13.59□□□□□ -0.23
MTHFR-204ENST00000376590 GNAT3A8MTJ3 354 aa13.59□□□□□ -0.23
MTHFR-204ENST00000376590 GRIPAP1Q4V328 841 aa13.59□□□□□ -0.23
MTHFR-204ENST00000376590 NUP88Q99567 741 aaPredicted RBP13.59□□□□□ -0.23
MTHFR-204ENST00000376590 THUMPD2Q9BTF0 503 aaKnown RBP13.59□□□□□ -0.23
MTHFR-204ENST00000376590 SAMM50Q9Y512 469 aa13.59□□□□□ -0.23
MTHFR-204ENST00000376590 FANCD2Q9BXW9 1451 aa13.59□□□□□ -0.23
MTHFR-204ENST00000376590 PRPF4BQ13523 1007 aaKnown RBP13.59□□□□□ -0.23
MTHFR-204ENST00000376590 NLRP5P59047 1200 aa13.59□□□□□ -0.23
MTHFR-204ENST00000376590 FEZ1Q99689 392 aa13.59□□□□□ -0.23
MTHFR-204ENST00000376590 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
MTHFR-204ENST00000376590 KIF4BQ2VIQ3 1234 aa13.58□□□□□ -0.24
MTHFR-204ENST00000376590 TCERG1LQ5VWI1 586 aa13.58□□□□□ -0.24
MTHFR-204ENST00000376590 ANKLE2Q86XL3 938 aa13.58□□□□□ -0.24
MTHFR-204ENST00000376590 PRKCSHP14314 528 aaPredicted RBP13.58□□□□□ -0.24
MTHFR-204ENST00000376590 PDE3AQ14432 1141 aa13.58□□□□□ -0.24
MTHFR-204ENST00000376590 CCDC8Q9H0W5 538 aaPredicted RBP13.58□□□□□ -0.24
MTHFR-204ENST00000376590 PPFIA3O75145 1194 aa13.58□□□□□ -0.24
MTHFR-204ENST00000376590 CCT2P78371 535 aaKnown RBP13.58□□□□□ -0.24
MTHFR-204ENST00000376590 GIMAP7Q8NHV1 300 aa13.58□□□□□ -0.24
MTHFR-204ENST00000376590 CTCFLQ8NI51 663 aaPredicted RBP13.58□□□□□ -0.24
MTHFR-204ENST00000376590 C6orf229H3BNL8 230 aa13.58□□□□□ -0.24
MTHFR-204ENST00000376590 URI1O94763 535 aaPredicted RBP13.58□□□□□ -0.24
MTHFR-204ENST00000376590 GPTP24298 496 aa13.58□□□□□ -0.24
MTHFR-204ENST00000376590 SMC1AQ14683 1233 aaKnown RBP13.58□□□□□ -0.24
MTHFR-204ENST00000376590 ISM2Q6H9L7 571 aa13.57□□□□□ -0.24
MTHFR-204ENST00000376590 AKAP2Q9Y2D5 859 aa13.57□□□□□ -0.24
MTHFR-204ENST00000376590 TMCO5BA8MYB1 307 aa13.57□□□□□ -0.24
MTHFR-204ENST00000376590 VPS36Q86VN1 386 aa13.57□□□□□ -0.24
MTHFR-204ENST00000376590 SLC12A7Q9Y666 1083 aa13.57□□□□□ -0.24
MTHFR-204ENST00000376590 ZNF354CQ86Y25 554 aa13.57□□□□□ -0.24
MTHFR-204ENST00000376590 RAD54L2Q9Y4B4 1467 aa13.57□□□□□ -0.24
MTHFR-204ENST00000376590 KIF5CO60282 957 aa13.57□□□□□ -0.24
MTHFR-204ENST00000376590 RNF187Q5TA31 235 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms