RNA–Protein interactions for RNA: ENST00000376569.7

DDR1-226, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-226ENST00000376569 IL17REQ8NFR9 667 aa15.38■□□□□ 0.05
DDR1-226ENST00000376569 FSD1Q9BTV5 496 aa15.38■□□□□ 0.05
DDR1-226ENST00000376569 SHROOM2Q13796 1616 aa15.38■□□□□ 0.05
DDR1-226ENST00000376569 NASPP49321 788 aaPredicted RBP15.38■□□□□ 0.05
DDR1-226ENST00000376569 TAF7LQ5H9L4 462 aa15.38■□□□□ 0.05
DDR1-226ENST00000376569 NBPF6Q5VWK0 638 aa15.38■□□□□ 0.05
DDR1-226ENST00000376569 GPATCH3Q96I76 525 aa15.38■□□□□ 0.05
DDR1-226ENST00000376569 NBPF4Q96M43 638 aa15.38■□□□□ 0.05
DDR1-226ENST00000376569 EVA1CP58658 441 aa15.37■□□□□ 0.05
DDR1-226ENST00000376569 MAP3K2Q9Y2U5 619 aa15.37■□□□□ 0.05
DDR1-226ENST00000376569 KIDINS220Q9ULH0 1771 aa15.37■□□□□ 0.05
DDR1-226ENST00000376569 NBPF7P0C2Y1 421 aaPredicted RBP15.37■□□□□ 0.05
DDR1-226ENST00000376569 HECW2Q9P2P5 1572 aa15.37■□□□□ 0.05
DDR1-226ENST00000376569 NUCB2P80303 420 aa15.36■□□□□ 0.05
DDR1-226ENST00000376569 CEBPZQ03701 1054 aaKnown RBP15.36■□□□□ 0.05
DDR1-226ENST00000376569 DNAAF4Q8WXU2 420 aa15.36■□□□□ 0.05
DDR1-226ENST00000376569 NDUFB9Q9Y6M9 179 aa15.36■□□□□ 0.05
DDR1-226ENST00000376569 EDC4Q6P2E9 1401 aaKnown RBP15.36■□□□□ 0.05
DDR1-226ENST00000376569 GLI2P10070 1586 aa15.36■□□□□ 0.05
DDR1-226ENST00000376569 PRAMEF22A3QJZ6 481 aa15.36■□□□□ 0.05
DDR1-226ENST00000376569 MRE11P49959 708 aa15.35■□□□□ 0.05
DDR1-226ENST00000376569 SMC3Q9UQE7 1217 aa15.35■□□□□ 0.05
DDR1-226ENST00000376569 SYCE3A1L190 88 aa15.35■□□□□ 0.05
DDR1-226ENST00000376569 ANKRD24Q8TF21 1146 aa15.35■□□□□ 0.05
DDR1-226ENST00000376569 NEO1Q92859 1461 aa15.35■□□□□ 0.05
DDR1-226ENST00000376569 HSPA2P54652 639 aa15.34■□□□□ 0.05
DDR1-226ENST00000376569 PRPF40BQ6NWY9 871 aaKnown RBP15.34■□□□□ 0.05
DDR1-226ENST00000376569 TMEM2Q9UHN6 1383 aa15.34■□□□□ 0.05
DDR1-226ENST00000376569 BAG4O95429 457 aaKnown RBP15.34■□□□□ 0.05
DDR1-226ENST00000376569 DDX58O95786 925 aaKnown RBP15.34■□□□□ 0.05
DDR1-226ENST00000376569 CNTROBQ8N137 903 aa15.34■□□□□ 0.05
DDR1-226ENST00000376569 STK11IPQ8N1F8 1099 aa15.34■□□□□ 0.05
DDR1-226ENST00000376569 MYD88Q99836 296 aa15.34■□□□□ 0.05
DDR1-226ENST00000376569 PTPRCP08575 1304 aa15.33■□□□□ 0.05
DDR1-226ENST00000376569 SKOR2Q2VWA4 1001 aaPredicted RBP15.33■□□□□ 0.04
DDR1-226ENST00000376569 KRT28Q7Z3Y7 464 aa15.33■□□□□ 0.04
DDR1-226ENST00000376569 JAKMIP1Q96N16 626 aaKnown RBP15.33■□□□□ 0.04
DDR1-226ENST00000376569 QRICH2Q9H0J4 1663 aa15.33■□□□□ 0.04
DDR1-226ENST00000376569 PPP6R1Q9UPN7 881 aa15.33■□□□□ 0.04
DDR1-226ENST00000376569 CASTP20810 708 aaKnown RBP15.33■□□□□ 0.04
DDR1-226ENST00000376569 DRC7Q8IY82 874 aa15.33■□□□□ 0.04
DDR1-226ENST00000376569 ABCA9Q8IUA7 1624 aa15.33■□□□□ 0.04
DDR1-226ENST00000376569 ZKSCAN1P17029 563 aaPredicted RBP15.32■□□□□ 0.04
DDR1-226ENST00000376569 ADGRB3O60242 1522 aa15.32■□□□□ 0.04
DDR1-226ENST00000376569 ZFYVE9O95405 1425 aa15.32■□□□□ 0.04
DDR1-226ENST00000376569 TOM1L2Q6ZVM7 507 aa15.32■□□□□ 0.04
DDR1-226ENST00000376569 UNC5CLQ8IV45 518 aa15.32■□□□□ 0.04
DDR1-226ENST00000376569 NFATC2IPQ8NCF5 419 aa15.32■□□□□ 0.04
DDR1-226ENST00000376569 USP26Q9BXU7 913 aa15.32■□□□□ 0.04
DDR1-226ENST00000376569 FLT4P35916 1363 aa15.32■□□□□ 0.04
DDR1-226ENST00000376569 CCDC83Q8IWF9 413 aa15.32■□□□□ 0.04
DDR1-226ENST00000376569 RHPN1Q8TCX5 695 aa15.32■□□□□ 0.04
DDR1-226ENST00000376569 GCP02774 474 aa15.31■□□□□ 0.04
DDR1-226ENST00000376569 ABCC4O15439 1325 aa15.31■□□□□ 0.04
DDR1-226ENST00000376569 TMX3Q96JJ7 454 aa15.31■□□□□ 0.04
DDR1-226ENST00000376569 MROH2AA6NES4 1674 aa15.31■□□□□ 0.04
DDR1-226ENST00000376569 INO80Q9ULG1 1556 aaPredicted RBP15.31■□□□□ 0.04
DDR1-226ENST00000376569 ZNF853P0CG23 659 aa15.3■□□□□ 0.04
DDR1-226ENST00000376569 ANTXR1Q9H6X2 564 aa15.3■□□□□ 0.04
DDR1-226ENST00000376569 TATP17735 454 aaPredicted RBP15.3■□□□□ 0.04
DDR1-226ENST00000376569 NECAB1Q8N987 351 aa15.3■□□□□ 0.04
DDR1-226ENST00000376569 TOMM22Q9NS69 142 aa15.3■□□□□ 0.04
DDR1-226ENST00000376569 PALD1Q9ULE6 856 aa15.3■□□□□ 0.04
DDR1-226ENST00000376569 CABP4P57796 275 aa15.3■□□□□ 0.04
DDR1-226ENST00000376569 ZBTB3Q9H5J0 574 aa15.3■□□□□ 0.04
DDR1-226ENST00000376569 PRDM11Q9NQV5 511 aa15.29■□□□□ 0.04
DDR1-226ENST00000376569 DEPDC5O75140 1603 aa15.29■□□□□ 0.04
DDR1-226ENST00000376569 KIAA1210Q9ULL0 1709 aa15.29■□□□□ 0.04
DDR1-226ENST00000376569 UBE3BQ7Z3V4 1068 aa15.29■□□□□ 0.04
DDR1-226ENST00000376569 ATP8B2P98198 1209 aa15.29■□□□□ 0.04
DDR1-226ENST00000376569 DDX11Q96FC9 970 aa15.29■□□□□ 0.04
DDR1-226ENST00000376569 PLEKHG3A1L390 1219 aa15.28■□□□□ 0.04
DDR1-226ENST00000376569 RBM25P49756 843 aaKnown RBP15.28■□□□□ 0.04
DDR1-226ENST00000376569 PROSER3Q2NL68 480 aa15.28■□□□□ 0.04
DDR1-226ENST00000376569 RUFY2Q8WXA3 655 aa15.28■□□□□ 0.04
DDR1-226ENST00000376569 KIF1BPQ96EK5 621 aa15.28■□□□□ 0.04
DDR1-226ENST00000376569 NPHP1O15259 732 aa15.28■□□□□ 0.04
DDR1-226ENST00000376569 COPS6Q7L5N1 327 aa15.28■□□□□ 0.04
DDR1-226ENST00000376569 ESYT1Q9BSJ8 1104 aa15.28■□□□□ 0.04
DDR1-226ENST00000376569 LRRC2Q9BYS8 371 aa15.28■□□□□ 0.04
DDR1-226ENST00000376569 USP44Q9H0E7 712 aa15.28■□□□□ 0.04
DDR1-226ENST00000376569 EDC3Q96F86 508 aaKnown RBP15.28■□□□□ 0.04
DDR1-226ENST00000376569 RTL1A6NKG5 1358 aa15.27■□□□□ 0.04
DDR1-226ENST00000376569 CHMP4CQ96CF2 233 aa15.27■□□□□ 0.04
DDR1-226ENST00000376569 A2ML1A8K2U0 1454 aa15.27■□□□□ 0.04
DDR1-226ENST00000376569 DBF4Q9UBU7 674 aaPredicted RBP15.27■□□□□ 0.03
DDR1-226ENST00000376569 TBX22Q9Y458 520 aa15.27■□□□□ 0.03
DDR1-226ENST00000376569 H3BQV1 296 aa15.27■□□□□ 0.03
DDR1-226ENST00000376569 WASHC4Q2M389 1173 aa15.27■□□□□ 0.03
DDR1-226ENST00000376569 IFFO2Q5TF58 517 aa15.27■□□□□ 0.03
DDR1-226ENST00000376569 SNRKQ9NRH2 765 aa15.27■□□□□ 0.03
DDR1-226ENST00000376569 APPP05067 770 aa15.26■□□□□ 0.03
DDR1-226ENST00000376569 XAGE3Q8WTP9 111 aa15.26■□□□□ 0.03
DDR1-226ENST00000376569 RRAGDQ9NQL2 400 aaPredicted RBP15.26■□□□□ 0.03
DDR1-226ENST00000376569 ADGRB1O14514 1584 aa15.26■□□□□ 0.03
DDR1-226ENST00000376569 ALKQ9UM73 1620 aa15.26■□□□□ 0.03
DDR1-226ENST00000376569 FKBP4Q02790 459 aaKnown RBP eCLIP15.26■□□□□ 0.03
DDR1-226ENST00000376569 HSP90AB4PQ58FF6 505 aa15.26■□□□□ 0.03
DDR1-226ENST00000376569 GAS2L3Q86XJ1 694 aa15.26■□□□□ 0.03
DDR1-226ENST00000376569 RAB11FIP4Q86YS3 637 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms