RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 ATP6V1AP38606 617 aa19.15■□□□□ 0.66
CLCN6-203ENST00000376490 COL23A1Q86Y22 540 aaPredicted RBP19.14■□□□□ 0.65
CLCN6-203ENST00000376490 SGIP1Q9BQI5 828 aa19.14■□□□□ 0.65
CLCN6-203ENST00000376490 RBM42Q9BTD8 480 aaKnown RBP19.14■□□□□ 0.65
CLCN6-203ENST00000376490 COL24A1Q17RW2 1714 aa19.14■□□□□ 0.65
CLCN6-203ENST00000376490 MSH5O43196 834 aa19.13■□□□□ 0.65
CLCN6-203ENST00000376490 HMGB2P26583 209 aaKnown RBP19.13■□□□□ 0.65
CLCN6-203ENST00000376490 ITPK1Q13572 414 aa19.13■□□□□ 0.65
CLCN6-203ENST00000376490 LINC00116Q8NCU8 138 aa19.13■□□□□ 0.65
CLCN6-203ENST00000376490 SLC16A10Q8TF71 515 aa19.13■□□□□ 0.65
CLCN6-203ENST00000376490 NUDCQ9Y266 331 aa19.13■□□□□ 0.65
CLCN6-203ENST00000376490 RNMTO43148 476 aaKnown RBP19.12■□□□□ 0.65
CLCN6-203ENST00000376490 SMIM5Q71RC9 77 aa19.12■□□□□ 0.65
CLCN6-203ENST00000376490 SLC4A9Q96Q91 983 aa19.12■□□□□ 0.65
CLCN6-203ENST00000376490 ZNF831Q5JPB2 1677 aa19.11■□□□□ 0.65
CLCN6-203ENST00000376490 U2AF1L5P0DN76 240 aaPredicted RBP19.11■□□□□ 0.65
CLCN6-203ENST00000376490 ZEB1P37275 1124 aaPredicted RBP19.11■□□□□ 0.65
CLCN6-203ENST00000376490 U2AF1Q01081 240 aaKnown RBP eCLIP19.11■□□□□ 0.65
CLCN6-203ENST00000376490 PHACTR3Q96KR7 559 aa19.11■□□□□ 0.65
CLCN6-203ENST00000376490 ADAMTS7Q9UKP4 1686 aa19.11■□□□□ 0.65
CLCN6-203ENST00000376490 MYH14Q7Z406 1995 aaKnown RBP19.1■□□□□ 0.65
CLCN6-203ENST00000376490 PRKAR2BP31323 418 aa19.1■□□□□ 0.65
CLCN6-203ENST00000376490 AMIGO3Q86WK7 504 aa19.1■□□□□ 0.65
CLCN6-203ENST00000376490 AK7Q96M32 723 aa19.1■□□□□ 0.65
CLCN6-203ENST00000376490 RSPH6AQ9H0K4 717 aa19.1■□□□□ 0.65
CLCN6-203ENST00000376490 SLC52A2Q9HAB3 445 aa19.1■□□□□ 0.65
CLCN6-203ENST00000376490 COL5A3P25940 1745 aaPredicted RBP19.09■□□□□ 0.65
CLCN6-203ENST00000376490 PTCD1O75127 700 aaKnown RBP19.09■□□□□ 0.65
CLCN6-203ENST00000376490 FLAD1Q8NFF5 587 aa19.08■□□□□ 0.64
CLCN6-203ENST00000376490 ARXQ96QS3 562 aa19.08■□□□□ 0.64
CLCN6-203ENST00000376490 GNAT3A8MTJ3 354 aa19.07■□□□□ 0.64
CLCN6-203ENST00000376490 FCHSD2O94868 740 aa19.07■□□□□ 0.64
CLCN6-203ENST00000376490 PHF14O94880 888 aa19.07■□□□□ 0.64
CLCN6-203ENST00000376490 IL17REQ8NFR9 667 aa19.07■□□□□ 0.64
CLCN6-203ENST00000376490 GAS2L2Q8NHY3 880 aa19.07■□□□□ 0.64
CLCN6-203ENST00000376490 SLC39A6Q13433 755 aa19.06■□□□□ 0.64
CLCN6-203ENST00000376490 FHDC1Q9C0D6 1143 aaPredicted RBP19.06■□□□□ 0.64
CLCN6-203ENST00000376490 SIPA1L3O60292 1781 aaPredicted RBP19.06■□□□□ 0.64
CLCN6-203ENST00000376490 DLG5Q8TDM6 1919 aa19.06■□□□□ 0.64
CLCN6-203ENST00000376490 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.05■□□□□ 0.64
CLCN6-203ENST00000376490 GNPATO15228 680 aa19.05■□□□□ 0.64
CLCN6-203ENST00000376490 RALBP1Q15311 655 aa19.05■□□□□ 0.64
CLCN6-203ENST00000376490 MSL1Q68DK7 614 aa19.05■□□□□ 0.64
CLCN6-203ENST00000376490 TJP1Q07157 1748 aa19.05■□□□□ 0.64
CLCN6-203ENST00000376490 MAP3K5Q99683 1374 aa19.05■□□□□ 0.64
CLCN6-203ENST00000376490 MRC1P22897 1456 aa19.04■□□□□ 0.64
CLCN6-203ENST00000376490 POLD1P28340 1107 aa19.04■□□□□ 0.64
CLCN6-203ENST00000376490 SYT17Q9BSW7 474 aa19.04■□□□□ 0.64
CLCN6-203ENST00000376490 SSFA2P28290 1259 aa19.03■□□□□ 0.64
CLCN6-203ENST00000376490 RC3H1Q5TC82 1133 aaKnown RBP19.02■□□□□ 0.64
CLCN6-203ENST00000376490 UBR2Q8IWV8 1755 aa19.01■□□□□ 0.63
CLCN6-203ENST00000376490 TEFQ10587 303 aa19.01■□□□□ 0.63
CLCN6-203ENST00000376490 KLHL34Q8N239 644 aa19■□□□□ 0.63
CLCN6-203ENST00000376490 RTCBQ9Y3I0 505 aaKnown RBP19■□□□□ 0.63
CLCN6-203ENST00000376490 CICQ96RK0 1608 aaPredicted RBP19■□□□□ 0.63
CLCN6-203ENST00000376490 CNTNAP4Q9C0A0 1308 aa19■□□□□ 0.63
CLCN6-203ENST00000376490 RPS6KA4O75676 772 aa18.99■□□□□ 0.63
CLCN6-203ENST00000376490 CRKLP46109 303 aaKnown RBP18.99■□□□□ 0.63
CLCN6-203ENST00000376490 TRAPPC3LQ5T215 181 aa18.99■□□□□ 0.63
CLCN6-203ENST00000376490 DNAJC10Q8IXB1 793 aa18.99■□□□□ 0.63
CLCN6-203ENST00000376490 ARHGEF1Q92888 912 aaKnown RBP18.98■□□□□ 0.63
CLCN6-203ENST00000376490 KCPQ6ZWJ8 1503 aa18.98■□□□□ 0.63
CLCN6-203ENST00000376490 MYBBP1AQ9BQG0 1328 aaKnown RBP18.98■□□□□ 0.63
CLCN6-203ENST00000376490 CEMIPQ8WUJ3 1361 aa18.97■□□□□ 0.63
CLCN6-203ENST00000376490 MCM10Q7L590 875 aa18.97■□□□□ 0.63
CLCN6-203ENST00000376490 PLEKHF1Q96S99 279 aa18.97■□□□□ 0.63
CLCN6-203ENST00000376490 C4AP0C0L4 1744 aa18.97■□□□□ 0.63
CLCN6-203ENST00000376490 DCTN1Q14203 1278 aa18.96■□□□□ 0.63
CLCN6-203ENST00000376490 INTS5Q6P9B9 1019 aaKnown RBP18.96■□□□□ 0.63
CLCN6-203ENST00000376490 RTF1Q92541 710 aaKnown RBP18.96■□□□□ 0.63
CLCN6-203ENST00000376490 DCAF8L1A6NGE4 600 aa18.95■□□□□ 0.62
CLCN6-203ENST00000376490 NEFMP07197 916 aa18.95■□□□□ 0.62
CLCN6-203ENST00000376490 CYP19A1P11511 503 aaPredicted RBP18.95■□□□□ 0.62
CLCN6-203ENST00000376490 ZNF790Q6PG37 636 aa18.95■□□□□ 0.62
CLCN6-203ENST00000376490 TTC5Q8N0Z6 440 aa18.95■□□□□ 0.62
CLCN6-203ENST00000376490 BTBD11A6QL63 1104 aa18.94■□□□□ 0.62
CLCN6-203ENST00000376490 KCNQ3O43525 872 aa18.94■□□□□ 0.62
CLCN6-203ENST00000376490 VSIG10Q8N0Z9 540 aa18.94■□□□□ 0.62
CLCN6-203ENST00000376490 ZNF496Q96IT1 587 aaPredicted RBP18.94■□□□□ 0.62
CLCN6-203ENST00000376490 HTATSF1O43719 755 aaKnown RBP18.93■□□□□ 0.62
CLCN6-203ENST00000376490 ADRA2BP18089 450 aa18.93■□□□□ 0.62
CLCN6-203ENST00000376490 RFC4P35249 363 aa18.93■□□□□ 0.62
CLCN6-203ENST00000376490 PRKRIP1Q9H875 184 aaPredicted RBP18.93■□□□□ 0.62
CLCN6-203ENST00000376490 CCDC87Q9NVE4 849 aa18.93■□□□□ 0.62
CLCN6-203ENST00000376490 NLGN2Q8NFZ4 835 aa18.92■□□□□ 0.62
CLCN6-203ENST00000376490 PNNQ9H307 717 aaKnown RBP18.92■□□□□ 0.62
CLCN6-203ENST00000376490 ZNF316A6NFI3 1004 aaPredicted RBP18.91■□□□□ 0.62
CLCN6-203ENST00000376490 GYS1P13807 737 aa18.9■□□□□ 0.62
CLCN6-203ENST00000376490 NFE2L2Q16236 605 aa18.9■□□□□ 0.62
CLCN6-203ENST00000376490 NLGN1Q8N2Q7 840 aa18.9■□□□□ 0.62
CLCN6-203ENST00000376490 SRP68Q9UHB9 627 aaKnown RBP18.9■□□□□ 0.62
CLCN6-203ENST00000376490 HEG1Q9ULI3 1381 aa18.9■□□□□ 0.62
CLCN6-203ENST00000376490 MMP10P09238 476 aa18.89■□□□□ 0.61
CLCN6-203ENST00000376490 FMNL2Q96PY5 1086 aa18.89■□□□□ 0.61
CLCN6-203ENST00000376490 ZBTB1Q9Y2K1 713 aa18.89■□□□□ 0.61
CLCN6-203ENST00000376490 CHD4Q14839 1912 aa18.89■□□□□ 0.61
CLCN6-203ENST00000376490 MAPK8IP3Q9UPT6 1336 aa18.89■□□□□ 0.61
CLCN6-203ENST00000376490 CANXP27824 592 aaKnown RBP18.88■□□□□ 0.61
CLCN6-203ENST00000376490 TAF7Q15545 349 aaPredicted RBP18.88■□□□□ 0.61
CLCN6-203ENST00000376490 MIS18AQ9NYP9 233 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms