RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 PDE3BQ13370 1112 aa6.9□□□□□ -1.3
SCN2A-202ENST00000375427 AMOTQ4VCS5 1084 aa6.9□□□□□ -1.3
SCN2A-202ENST00000375427 SPECC1Q5M775 1068 aa6.9□□□□□ -1.3
SCN2A-202ENST00000375427 FOXD4L5Q5VV16 416 aaPredicted RBP6.9□□□□□ -1.3
SCN2A-202ENST00000375427 CEP57L1Q8IYX8 460 aa6.9□□□□□ -1.3
SCN2A-202ENST00000375427 PSPC1Q8WXF1 523 aaKnown RBP6.9□□□□□ -1.3
SCN2A-202ENST00000375427 FOXD4L4Q8WXT5 416 aaPredicted RBP6.9□□□□□ -1.3
SCN2A-202ENST00000375427 JADE2Q9NQC1 790 aa6.9□□□□□ -1.3
SCN2A-202ENST00000375427 KRT7P08729 469 aa6.9□□□□□ -1.31
SCN2A-202ENST00000375427 COG7P83436 770 aa6.9□□□□□ -1.31
SCN2A-202ENST00000375427 KLHDC4Q8TBB5 520 aa6.9□□□□□ -1.31
SCN2A-202ENST00000375427 MYCBPQ99417 103 aaPredicted RBP6.9□□□□□ -1.31
SCN2A-202ENST00000375427 SH3BP5O60239 455 aa6.9□□□□□ -1.31
SCN2A-202ENST00000375427 LACTBP83111 547 aaPredicted RBP6.9□□□□□ -1.31
SCN2A-202ENST00000375427 GTF2F1P35269 517 aaKnown RBP eCLIP6.89□□□□□ -1.31
SCN2A-202ENST00000375427 ATP6V1AP38606 617 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 CACNA2D4Q7Z3S7 1137 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 SEC62Q99442 399 aaKnown RBP6.89□□□□□ -1.31
SCN2A-202ENST00000375427 FERMT1Q9BQL6 677 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 BRMS1Q9HCU9 246 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 MTUS2Q5JR59 1369 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 CLNS1AP54105 237 aaKnown RBP6.89□□□□□ -1.31
SCN2A-202ENST00000375427 MRFAP1L1Q96HT8 127 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 TTC14Q96N46 770 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 SMIM24O75264 130 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 GBP1P32455 592 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 CCDC129Q6ZRS4 1044 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 GSDMBQ8TAX9 411 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 PRDM5Q9NQX1 630 aaPredicted RBP6.89□□□□□ -1.31
SCN2A-202ENST00000375427 IKQ13123 557 aaPredicted RBP6.89□□□□□ -1.31
SCN2A-202ENST00000375427 MCM10Q7L590 875 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 TAF4BQ92750 862 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 TUBB1Q9H4B7 451 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 GOLGA1Q92805 767 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 TRERF1Q96PN7 1200 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 TERF2IPQ9NYB0 399 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 WBP4O75554 376 aaKnown RBP6.89□□□□□ -1.31
SCN2A-202ENST00000375427 ZBTB16Q05516 673 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 STIM1Q13586 685 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 PSMD6Q15008 389 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 ARHGEF9O43307 516 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 POTEJP0CG39 1038 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 CARD11Q9BXL7 1154 aa6.89□□□□□ -1.31
SCN2A-202ENST00000375427 CPLX1O14810 134 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 RAD21O60216 631 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 PRDM1O75626 825 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 NBPF6Q5VWK0 638 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 NLRP9Q7RTR0 991 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 ERMNQ8TAM6 284 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 NBPF4Q96M43 638 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 ANLNQ9NQW6 1124 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 GRM1Q13255 1194 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 ENAHQ8N8S7 591 aaPredicted RBP6.88□□□□□ -1.31
SCN2A-202ENST00000375427 PRDM10Q9NQV6 1147 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 GOLGA8QA0A0J9YX86 632 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 GOLGA8OA6NCC3 632 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 GOLGA8NF8WBI6 632 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 GCKP35557 465 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 TMEM132AQ24JP5 1023 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 GOPCQ9HD26 462 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 FANCIQ9NVI1 1328 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 CCER2I3L3R5 266 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 CCDC159P0C7I6 412 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 SLC8A1P32418 973 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 SESN3P58005 492 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 RPAINQ86UA6 219 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 FAM186BQ8IYM0 893 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 RASSF4Q9H2L5 321 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 RABEP2Q9H5N1 569 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 SLC38A10Q9HBR0 1119 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 TSPY2A6NKD2 308 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 KINO60870 393 aaKnown RBP6.88□□□□□ -1.31
SCN2A-202ENST00000375427 RHOBTB1O94844 696 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 TSPY3P0CV98 308 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 TSPY8P0CW00 308 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 TSPY1Q01534 308 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 NUCKS1Q9H1E3 243 aaKnown RBP6.88□□□□□ -1.31
SCN2A-202ENST00000375427 EIF3AQ14152 1382 aaKnown RBP6.88□□□□□ -1.31
SCN2A-202ENST00000375427 PRPHP41219 470 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 ANKRD35Q8N283 1001 aa6.88□□□□□ -1.31
SCN2A-202ENST00000375427 HSP90AA5PQ58FG0 334 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 SPOUT1Q5T280 376 aaKnown RBP6.87□□□□□ -1.31
SCN2A-202ENST00000375427 HEATR3Q7Z4Q2 680 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 SDCCAG8Q86SQ7 713 aaPredicted RBP6.87□□□□□ -1.31
SCN2A-202ENST00000375427 TXNDC9O14530 226 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 NBPF1Q3BBV0 1214 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 RBM26Q5T8P6 1007 aaKnown RBP6.87□□□□□ -1.31
SCN2A-202ENST00000375427 CCDC121Q6ZUS5 278 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 CCDC63Q8NA47 563 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 SDF4Q9BRK5 362 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 NAA15Q9BXJ9 866 aaKnown RBP6.87□□□□□ -1.31
SCN2A-202ENST00000375427 FAF1Q9UNN5 650 aaPredicted RBP6.87□□□□□ -1.31
SCN2A-202ENST00000375427 PPP1R12AO14974 1030 aaPredicted RBP6.87□□□□□ -1.31
SCN2A-202ENST00000375427 LMAN1P49257 510 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 FILIP1Q7Z7B0 1213 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 CNPY4Q8N129 248 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 RUFY2Q8WXA3 655 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 FOXD4L1Q9NU39 408 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 DYTNA2CJ06 578 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 BUB1BO60566 1050 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms