RNA–Protein interactions for RNA: ENST00000375320.5

APOA1-203, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene APOA1, Length 940 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-203ENST00000375320 AKAP4Q5JQC9 854 aa18.37■□□□□ 0.53
APOA1-203ENST00000375320 MYH14Q7Z406 1995 aaKnown RBP18.37■□□□□ 0.53
APOA1-203ENST00000375320 LOC102724428A0A0B4J2F2 783 aa18.36■□□□□ 0.53
APOA1-203ENST00000375320 SIK1P57059 783 aa18.36■□□□□ 0.53
APOA1-203ENST00000375320 ATG3Q9NT62 314 aa18.36■□□□□ 0.53
APOA1-203ENST00000375320 ATF5Q9Y2D1 282 aaPredicted RBP18.36■□□□□ 0.53
APOA1-203ENST00000375320 MAP3K5Q99683 1374 aa18.35■□□□□ 0.53
APOA1-203ENST00000375320 PTGER2P43116 358 aa18.35■□□□□ 0.53
APOA1-203ENST00000375320 CABP4P57796 275 aa18.35■□□□□ 0.53
APOA1-203ENST00000375320 KCPQ6ZWJ8 1503 aa18.34■□□□□ 0.53
APOA1-203ENST00000375320 MTHFSDQ2M296 383 aaKnown RBP18.34■□□□□ 0.53
APOA1-203ENST00000375320 ITPK1Q13572 414 aa18.33■□□□□ 0.52
APOA1-203ENST00000375320 LINC00116Q8NCU8 138 aa18.33■□□□□ 0.52
APOA1-203ENST00000375320 AK7Q96M32 723 aa18.33■□□□□ 0.52
APOA1-203ENST00000375320 RSPH6AQ9H0K4 717 aa18.33■□□□□ 0.52
APOA1-203ENST00000375320 PRKAR2BP31323 418 aa18.32■□□□□ 0.52
APOA1-203ENST00000375320 ZEB1P37275 1124 aaPredicted RBP18.32■□□□□ 0.52
APOA1-203ENST00000375320 DDX10Q13206 875 aaKnown RBP18.32■□□□□ 0.52
APOA1-203ENST00000375320 NUDCQ9Y266 331 aa18.32■□□□□ 0.52
APOA1-203ENST00000375320 SGIP1Q9BQI5 828 aa18.31■□□□□ 0.52
APOA1-203ENST00000375320 RNMTO43148 476 aaKnown RBP18.3■□□□□ 0.52
APOA1-203ENST00000375320 MSH5O43196 834 aa18.3■□□□□ 0.52
APOA1-203ENST00000375320 U2AF1L5P0DN76 240 aaPredicted RBP18.3■□□□□ 0.52
APOA1-203ENST00000375320 HMGB2P26583 209 aaKnown RBP18.3■□□□□ 0.52
APOA1-203ENST00000375320 ATP6V1AP38606 617 aa18.3■□□□□ 0.52
APOA1-203ENST00000375320 U2AF1Q01081 240 aaKnown RBP eCLIP18.3■□□□□ 0.52
APOA1-203ENST00000375320 NFATC2IPQ8NCF5 419 aa18.3■□□□□ 0.52
APOA1-203ENST00000375320 GAS2L2Q8NHY3 880 aa18.3■□□□□ 0.52
APOA1-203ENST00000375320 RBM42Q9BTD8 480 aaKnown RBP18.3■□□□□ 0.52
APOA1-203ENST00000375320 SLC52A2Q9HAB3 445 aa18.3■□□□□ 0.52
APOA1-203ENST00000375320 AMIGO3Q86WK7 504 aa18.29■□□□□ 0.52
APOA1-203ENST00000375320 COL23A1Q86Y22 540 aaPredicted RBP18.29■□□□□ 0.52
APOA1-203ENST00000375320 SLC16A10Q8TF71 515 aa18.29■□□□□ 0.52
APOA1-203ENST00000375320 SLC4A9Q96Q91 983 aa18.29■□□□□ 0.52
APOA1-203ENST00000375320 LGR6Q9HBX8 967 aa18.29■□□□□ 0.52
APOA1-203ENST00000375320 PHF14O94880 888 aa18.28■□□□□ 0.52
APOA1-203ENST00000375320 GNPATO15228 680 aa18.27■□□□□ 0.52
APOA1-203ENST00000375320 PTCD1O75127 700 aaKnown RBP18.27■□□□□ 0.52
APOA1-203ENST00000375320 RALBP1Q15311 655 aa18.26■□□□□ 0.51
APOA1-203ENST00000375320 MSL1Q68DK7 614 aa18.26■□□□□ 0.51
APOA1-203ENST00000375320 PHACTR3Q96KR7 559 aa18.26■□□□□ 0.51
APOA1-203ENST00000375320 LAMB4A4D0S4 1761 aa18.26■□□□□ 0.51
APOA1-203ENST00000375320 KDM3BQ7LBC6 1761 aa18.26■□□□□ 0.51
APOA1-203ENST00000375320 CNTNAP4Q9C0A0 1308 aa18.25■□□□□ 0.51
APOA1-203ENST00000375320 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.25■□□□□ 0.51
APOA1-203ENST00000375320 GNAT3A8MTJ3 354 aa18.25■□□□□ 0.51
APOA1-203ENST00000375320 SSFA2P28290 1259 aa18.25■□□□□ 0.51
APOA1-203ENST00000375320 SMIM5Q71RC9 77 aa18.25■□□□□ 0.51
APOA1-203ENST00000375320 FLAD1Q8NFF5 587 aa18.25■□□□□ 0.51
APOA1-203ENST00000375320 ARXQ96QS3 562 aa18.25■□□□□ 0.51
APOA1-203ENST00000375320 POLD1P28340 1107 aa18.24■□□□□ 0.51
APOA1-203ENST00000375320 FHDC1Q9C0D6 1143 aaPredicted RBP18.24■□□□□ 0.51
APOA1-203ENST00000375320 CEMIPQ8WUJ3 1361 aa18.24■□□□□ 0.51
APOA1-203ENST00000375320 MYBBP1AQ9BQG0 1328 aaKnown RBP18.23■□□□□ 0.51
APOA1-203ENST00000375320 SCN7AQ01118 1682 aa18.23■□□□□ 0.51
APOA1-203ENST00000375320 KIF13BQ9NQT8 1826 aa18.23■□□□□ 0.51
APOA1-203ENST00000375320 FCHSD2O94868 740 aa18.22■□□□□ 0.51
APOA1-203ENST00000375320 SLC39A6Q13433 755 aa18.22■□□□□ 0.51
APOA1-203ENST00000375320 GOLGB1Q14789 3259 aaKnown RBP18.22■□□□□ 0.51
APOA1-203ENST00000375320 TEFQ10587 303 aa18.21■□□□□ 0.51
APOA1-203ENST00000375320 KLHL34Q8N239 644 aa18.2■□□□□ 0.5
APOA1-203ENST00000375320 IL17REQ8NFR9 667 aa18.2■□□□□ 0.5
APOA1-203ENST00000375320 UTRNP46939 3433 aa18.19■□□□□ 0.5
APOA1-203ENST00000375320 CRKLP46109 303 aaKnown RBP18.19■□□□□ 0.5
APOA1-203ENST00000375320 KIAA1551Q9HCM1 1747 aa18.19■□□□□ 0.5
APOA1-203ENST00000375320 RTCBQ9Y3I0 505 aaKnown RBP18.19■□□□□ 0.5
APOA1-203ENST00000375320 CHD4Q14839 1912 aa18.19■□□□□ 0.5
APOA1-203ENST00000375320 BCORQ6W2J9 1755 aa18.19■□□□□ 0.5
APOA1-203ENST00000375320 RC3H1Q5TC82 1133 aaKnown RBP18.18■□□□□ 0.5
APOA1-203ENST00000375320 DNAJC10Q8IXB1 793 aa18.18■□□□□ 0.5
APOA1-203ENST00000375320 TTC5Q8N0Z6 440 aa18.18■□□□□ 0.5
APOA1-203ENST00000375320 SYT17Q9BSW7 474 aa18.18■□□□□ 0.5
APOA1-203ENST00000375320 NEFMP07197 916 aa18.16■□□□□ 0.5
APOA1-203ENST00000375320 ADRA2BP18089 450 aa18.16■□□□□ 0.5
APOA1-203ENST00000375320 MCM10Q7L590 875 aa18.16■□□□□ 0.5
APOA1-203ENST00000375320 RTF1Q92541 710 aaKnown RBP18.16■□□□□ 0.5
APOA1-203ENST00000375320 MAPK8IP3Q9UPT6 1336 aa18.16■□□□□ 0.5
APOA1-203ENST00000375320 N4BP2Q86UW6 1770 aaPredicted RBP18.15■□□□□ 0.5
APOA1-203ENST00000375320 AFDNP55196 1824 aaKnown RBP18.15■□□□□ 0.5
APOA1-203ENST00000375320 RPS6KA4O75676 772 aa18.15■□□□□ 0.5
APOA1-203ENST00000375320 PLEKHF1Q96S99 279 aa18.15■□□□□ 0.5
APOA1-203ENST00000375320 PRKRIP1Q9H875 184 aaPredicted RBP18.15■□□□□ 0.5
APOA1-203ENST00000375320 HEG1Q9ULI3 1381 aa18.15■□□□□ 0.5
APOA1-203ENST00000375320 ZNF790Q6PG37 636 aa18.14■□□□□ 0.49
APOA1-203ENST00000375320 CCDC87Q9NVE4 849 aa18.14■□□□□ 0.49
APOA1-203ENST00000375320 COL15A1P39059 1388 aa18.14■□□□□ 0.49
APOA1-203ENST00000375320 BRCA1P38398 1863 aaKnown RBP18.14■□□□□ 0.49
APOA1-203ENST00000375320 CYP19A1P11511 503 aaPredicted RBP18.13■□□□□ 0.49
APOA1-203ENST00000375320 DCTN1Q14203 1278 aa18.13■□□□□ 0.49
APOA1-203ENST00000375320 TRAPPC3LQ5T215 181 aa18.13■□□□□ 0.49
APOA1-203ENST00000375320 INTS5Q6P9B9 1019 aaKnown RBP18.13■□□□□ 0.49
APOA1-203ENST00000375320 VSIG10Q8N0Z9 540 aa18.13■□□□□ 0.49
APOA1-203ENST00000375320 ZNF496Q96IT1 587 aaPredicted RBP18.13■□□□□ 0.49
APOA1-203ENST00000375320 SOS1Q07889 1333 aaPredicted RBP18.13■□□□□ 0.49
APOA1-203ENST00000375320 BTBD11A6QL63 1104 aa18.12■□□□□ 0.49
APOA1-203ENST00000375320 NFE2L2Q16236 605 aa18.12■□□□□ 0.49
APOA1-203ENST00000375320 NLGN2Q8NFZ4 835 aa18.12■□□□□ 0.49
APOA1-203ENST00000375320 ARHGEF1Q92888 912 aaKnown RBP18.12■□□□□ 0.49
APOA1-203ENST00000375320 ZBTB1Q9Y2K1 713 aa18.12■□□□□ 0.49
APOA1-203ENST00000375320 USP42Q9H9J4 1324 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms