RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.58■■□□□ 1.53
NECAB3-202ENST00000375238 OVOS2A0A0G2JMS6 1433 aa24.58■■□□□ 1.52
NECAB3-202ENST00000375238 COL14A1Q05707 1796 aaKnown RBP24.57■■□□□ 1.52
NECAB3-202ENST00000375238 UBAP1LF5GYI3 381 aa24.57■■□□□ 1.52
NECAB3-202ENST00000375238 PARP4Q9UKK3 1724 aaKnown RBP24.57■■□□□ 1.52
NECAB3-202ENST00000375238 KDM3BQ7LBC6 1761 aa24.55■■□□□ 1.52
NECAB3-202ENST00000375238 LARP1Q6PKG0 1096 aaKnown RBP24.55■■□□□ 1.52
NECAB3-202ENST00000375238 ADAMTS7Q9UKP4 1686 aa24.55■■□□□ 1.52
NECAB3-202ENST00000375238 CARD10Q9BWT7 1032 aa24.55■■□□□ 1.52
NECAB3-202ENST00000375238 BTG4Q9NY30 223 aa24.54■■□□□ 1.52
NECAB3-202ENST00000375238 PHKG2P15735 406 aa24.53■■□□□ 1.52
NECAB3-202ENST00000375238 ARHGAP45Q92619 1136 aa24.53■■□□□ 1.52
NECAB3-202ENST00000375238 SCN11AQ9UI33 1791 aa24.53■■□□□ 1.52
NECAB3-202ENST00000375238 IFNL2Q8IZJ0 200 aa24.53■■□□□ 1.52
NECAB3-202ENST00000375238 SIPA1L3O60292 1781 aaPredicted RBP24.52■■□□□ 1.52
NECAB3-202ENST00000375238 BTBD11A6QL63 1104 aa24.51■■□□□ 1.51
NECAB3-202ENST00000375238 ITPRIPQ8IWB1 547 aa24.51■■□□□ 1.51
NECAB3-202ENST00000375238 DDRGK1Q96HY6 314 aa24.51■■□□□ 1.51
NECAB3-202ENST00000375238 TMEM57Q8N5G2 664 aa24.5■■□□□ 1.51
NECAB3-202ENST00000375238 RWDD1Q9H446 243 aaPredicted RBP24.49■■□□□ 1.51
NECAB3-202ENST00000375238 KDM6AO15550 1401 aaPredicted RBP24.49■■□□□ 1.51
NECAB3-202ENST00000375238 SOS1Q07889 1333 aaPredicted RBP24.49■■□□□ 1.51
NECAB3-202ENST00000375238 CYP27B1O15528 508 aa24.49■■□□□ 1.51
NECAB3-202ENST00000375238 IL2RBP14784 551 aa24.49■■□□□ 1.51
NECAB3-202ENST00000375238 DDX19BQ9UMR2 479 aa24.49■■□□□ 1.51
NECAB3-202ENST00000375238 API5Q9BZZ5 524 aaKnown RBP24.48■■□□□ 1.51
NECAB3-202ENST00000375238 ZCRB1Q8TBF4 217 aaKnown RBP24.47■■□□□ 1.51
NECAB3-202ENST00000375238 ADAMTS2O95450 1211 aa24.47■■□□□ 1.51
NECAB3-202ENST00000375238 SLC4A2P04920 1241 aa24.47■■□□□ 1.51
NECAB3-202ENST00000375238 EIF4A1P60842 406 aaKnown RBP24.47■■□□□ 1.51
NECAB3-202ENST00000375238 USP35Q9P2H5 1018 aa24.47■■□□□ 1.51
NECAB3-202ENST00000375238 KCNQ3O43525 872 aa24.46■■□□□ 1.51
NECAB3-202ENST00000375238 HSP90AB1P08238 724 aaKnown RBP24.46■■□□□ 1.51
NECAB3-202ENST00000375238 STK31Q9BXU1 1019 aa24.46■■□□□ 1.51
NECAB3-202ENST00000375238 PDZRN3Q9UPQ7 1066 aa24.46■■□□□ 1.51
NECAB3-202ENST00000375238 PLCH1Q4KWH8 1693 aa24.46■■□□□ 1.51
NECAB3-202ENST00000375238 PCDH11XQ9BZA7 1347 aa24.45■■□□□ 1.51
NECAB3-202ENST00000375238 PCDH11YQ9BZA8 1340 aa24.45■■□□□ 1.51
NECAB3-202ENST00000375238 NBR1Q14596 966 aa24.45■■□□□ 1.51
NECAB3-202ENST00000375238 CCDC30Q5VVM6 783 aa24.45■■□□□ 1.51
NECAB3-202ENST00000375238 DCAF5Q96JK2 942 aa24.45■■□□□ 1.51
NECAB3-202ENST00000375238 NUTM2BA6NNL0 878 aaPredicted RBP24.45■■□□□ 1.5
NECAB3-202ENST00000375238 NUTM2EB1AL46 878 aaPredicted RBP24.45■■□□□ 1.5
NECAB3-202ENST00000375238 NUTM2AQ8IVF1 878 aaPredicted RBP24.45■■□□□ 1.5
NECAB3-202ENST00000375238 ABCC4O15439 1325 aa24.44■■□□□ 1.5
NECAB3-202ENST00000375238 NECTIN2Q92692 538 aa24.44■■□□□ 1.5
NECAB3-202ENST00000375238 SLC52A2Q9HAB3 445 aa24.44■■□□□ 1.5
NECAB3-202ENST00000375238 CACNA1FO60840 1977 aa24.42■■□□□ 1.5
NECAB3-202ENST00000375238 PTPRCP08575 1304 aa24.42■■□□□ 1.5
NECAB3-202ENST00000375238 SHANK3Q9BYB0 1731 aa24.42■■□□□ 1.5
NECAB3-202ENST00000375238 HDGFL1Q5TGJ6 251 aa24.41■■□□□ 1.5
NECAB3-202ENST00000375238 CERKQ8TCT0 537 aa24.41■■□□□ 1.5
NECAB3-202ENST00000375238 HOXB7P09629 217 aa24.41■■□□□ 1.5
NECAB3-202ENST00000375238 HDAC1Q13547 482 aaPredicted RBP24.41■■□□□ 1.5
NECAB3-202ENST00000375238 NFATC2IPQ8NCF5 419 aa24.41■■□□□ 1.5
NECAB3-202ENST00000375238 MRC1P22897 1456 aa24.41■■□□□ 1.5
NECAB3-202ENST00000375238 G2E3Q7L622 706 aa24.39■■□□□ 1.5
NECAB3-202ENST00000375238 ZBTB40Q9NUA8 1239 aa24.39■■□□□ 1.5
NECAB3-202ENST00000375238 RGS12O14924 1447 aa24.39■■□□□ 1.5
NECAB3-202ENST00000375238 EIF2S2P20042 333 aaKnown RBP24.38■■□□□ 1.49
NECAB3-202ENST00000375238 DDX54Q8TDD1 881 aaKnown RBP24.38■■□□□ 1.49
NECAB3-202ENST00000375238 NRAPQ86VF7 1730 aa24.38■■□□□ 1.49
NECAB3-202ENST00000375238 CABP4P57796 275 aa24.37■■□□□ 1.49
NECAB3-202ENST00000375238 CHMP4AQ9BY43 222 aa24.37■■□□□ 1.49
NECAB3-202ENST00000375238 SEC24BO95487 1268 aa24.36■■□□□ 1.49
NECAB3-202ENST00000375238 SLC39A6Q13433 755 aa24.36■■□□□ 1.49
NECAB3-202ENST00000375238 ZNF790Q6PG37 636 aa24.36■■□□□ 1.49
NECAB3-202ENST00000375238 CHMP4BQ9H444 224 aaKnown RBP24.36■■□□□ 1.49
NECAB3-202ENST00000375238 JCADQ9P266 1359 aa24.35■■□□□ 1.49
NECAB3-202ENST00000375238 HEG1Q9ULI3 1381 aa24.35■■□□□ 1.49
NECAB3-202ENST00000375238 WNK3Q9BYP7 1800 aa24.34■■□□□ 1.49
NECAB3-202ENST00000375238 GIGYF1O75420 1035 aaPredicted RBP24.34■■□□□ 1.49
NECAB3-202ENST00000375238 FLIIQ13045 1269 aa24.34■■□□□ 1.49
NECAB3-202ENST00000375238 DISP2A7MBM2 1401 aa24.34■■□□□ 1.49
NECAB3-202ENST00000375238 ZBTB7BO15156 539 aaPredicted RBP24.33■■□□□ 1.49
NECAB3-202ENST00000375238 NKX1-1Q15270 411 aaPredicted RBP24.33■■□□□ 1.49
NECAB3-202ENST00000375238 INTS3Q68E01 1043 aaKnown RBP24.33■■□□□ 1.49
NECAB3-202ENST00000375238 NWD2Q9ULI1 1742 aa24.33■■□□□ 1.49
NECAB3-202ENST00000375238 SLC4A3P48751 1232 aa24.33■■□□□ 1.49
NECAB3-202ENST00000375238 FKBP5Q13451 457 aaPredicted RBP24.32■■□□□ 1.48
NECAB3-202ENST00000375238 SMC5Q8IY18 1101 aa24.32■■□□□ 1.48
NECAB3-202ENST00000375238 TTC5Q8N0Z6 440 aa24.32■■□□□ 1.48
NECAB3-202ENST00000375238 CHPF2Q9P2E5 772 aa24.31■■□□□ 1.48
NECAB3-202ENST00000375238 ERVV-2B6SEH9 535 aa24.31■■□□□ 1.48
NECAB3-202ENST00000375238 F6X3S4 739 aa24.3■■□□□ 1.48
NECAB3-202ENST00000375238 C5P01031 1676 aa24.3■■□□□ 1.48
NECAB3-202ENST00000375238 PRAMEF22A3QJZ6 481 aa24.29■■□□□ 1.48
NECAB3-202ENST00000375238 SLC4A10Q6U841 1118 aa24.29■■□□□ 1.48
NECAB3-202ENST00000375238 PHAXQ9H814 394 aaKnown RBP24.29■■□□□ 1.48
NECAB3-202ENST00000375238 SLIT2O94813 1529 aa24.29■■□□□ 1.48
NECAB3-202ENST00000375238 SPATA31A1Q5TZJ5 1347 aa24.28■■□□□ 1.48
NECAB3-202ENST00000375238 ZNF496Q96IT1 587 aaPredicted RBP24.28■■□□□ 1.48
NECAB3-202ENST00000375238 TOGARAM1Q9Y4F4 1720 aa24.28■■□□□ 1.48
NECAB3-202ENST00000375238 DBF4Q9UBU7 674 aaPredicted RBP24.27■■□□□ 1.48
NECAB3-202ENST00000375238 CCT4P50991 539 aaKnown RBP24.26■■□□□ 1.47
NECAB3-202ENST00000375238 FMNL2Q96PY5 1086 aa24.26■■□□□ 1.47
NECAB3-202ENST00000375238 C1orf115Q9H7X2 142 aa24.26■■□□□ 1.47
NECAB3-202ENST00000375238 EXOC5O00471 708 aa24.25■■□□□ 1.47
NECAB3-202ENST00000375238 CCDC9Q9Y3X0 531 aaKnown RBP24.25■■□□□ 1.47
NECAB3-202ENST00000375238 ANXA1P04083 346 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms