RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 TMC1Q8TDI8 760 aa24.9■■□□□ 1.58
H2AFX-201ENST00000375167 PIM2Q9P1W9 311 aa24.9■■□□□ 1.58
H2AFX-201ENST00000375167 ZC3H4Q9UPT8 1303 aaKnown RBP24.89■■□□□ 1.58
H2AFX-201ENST00000375167 VEGFAP15692 232 aaPredicted RBP24.89■■□□□ 1.57
H2AFX-201ENST00000375167 TMF1P82094 1093 aa24.89■■□□□ 1.57
H2AFX-201ENST00000375167 USHBP1Q8N6Y0 703 aa24.89■■□□□ 1.57
H2AFX-201ENST00000375167 SMG6Q86US8 1419 aaKnown RBP24.88■■□□□ 1.57
H2AFX-201ENST00000375167 DALRD3Q5D0E6 543 aaKnown RBP24.88■■□□□ 1.57
H2AFX-201ENST00000375167 NBPF6Q5VWK0 638 aa24.87■■□□□ 1.57
H2AFX-201ENST00000375167 NBPF4Q96M43 638 aa24.87■■□□□ 1.57
H2AFX-201ENST00000375167 RTL1A6NKG5 1358 aa24.87■■□□□ 1.57
H2AFX-201ENST00000375167 FOXN1O15353 648 aa24.86■■□□□ 1.57
H2AFX-201ENST00000375167 PIGBQ92521 554 aa24.86■■□□□ 1.57
H2AFX-201ENST00000375167 TERF2IPQ9NYB0 399 aa24.86■■□□□ 1.57
H2AFX-201ENST00000375167 PARP3Q9Y6F1 533 aa24.86■■□□□ 1.57
H2AFX-201ENST00000375167 KCNA3P22001 575 aa24.85■■□□□ 1.57
H2AFX-201ENST00000375167 A0A1W2PP64 1363 aa24.84■■□□□ 1.57
H2AFX-201ENST00000375167 CYP27B1O15528 508 aa24.83■■□□□ 1.57
H2AFX-201ENST00000375167 TRAPPC3LQ5T215 181 aa24.83■■□□□ 1.57
H2AFX-201ENST00000375167 COG3Q96JB2 828 aa24.83■■□□□ 1.57
H2AFX-201ENST00000375167 ROCK2O75116 1388 aaKnown RBP24.82■■□□□ 1.56
H2AFX-201ENST00000375167 ATP6V1AP38606 617 aa24.82■■□□□ 1.56
H2AFX-201ENST00000375167 CTCFP49711 727 aaPredicted RBP24.82■■□□□ 1.56
H2AFX-201ENST00000375167 ITPK1Q13572 414 aa24.82■■□□□ 1.56
H2AFX-201ENST00000375167 AIDAQ96BJ3 306 aa24.82■■□□□ 1.56
H2AFX-201ENST00000375167 MKRN1Q9UHC7 482 aaKnown RBP24.82■■□□□ 1.56
H2AFX-201ENST00000375167 RTCBQ9Y3I0 505 aaKnown RBP24.82■■□□□ 1.56
H2AFX-201ENST00000375167 GLTPD2A6NH11 291 aa24.8■■□□□ 1.56
H2AFX-201ENST00000375167 SLC12A5Q9H2X9 1139 aa24.8■■□□□ 1.56
H2AFX-201ENST00000375167 CREBZFQ9NS37 354 aa24.8■■□□□ 1.56
H2AFX-201ENST00000375167 TIAM2Q8IVF5 1701 aa24.79■■□□□ 1.56
H2AFX-201ENST00000375167 KDM6AO15550 1401 aaPredicted RBP24.78■■□□□ 1.56
H2AFX-201ENST00000375167 ADRA2BP18089 450 aa24.78■■□□□ 1.56
H2AFX-201ENST00000375167 ABHD8Q96I13 439 aa24.78■■□□□ 1.56
H2AFX-201ENST00000375167 GYS1P13807 737 aa24.77■■□□□ 1.56
H2AFX-201ENST00000375167 MLLT1Q03111 559 aaPredicted RBP24.77■■□□□ 1.56
H2AFX-201ENST00000375167 TMOD3Q9NYL9 352 aa24.77■■□□□ 1.56
H2AFX-201ENST00000375167 FBLN1P23142 703 aa24.76■■□□□ 1.55
H2AFX-201ENST00000375167 RFC4P35249 363 aa24.75■■□□□ 1.55
H2AFX-201ENST00000375167 RASSF7Q02833 373 aa24.75■■□□□ 1.55
H2AFX-201ENST00000375167 ASAP1Q9ULH1 1129 aa24.75■■□□□ 1.55
H2AFX-201ENST00000375167 LMNB1P20700 586 aa24.74■■□□□ 1.55
H2AFX-201ENST00000375167 ARHGEF1Q92888 912 aaKnown RBP24.74■■□□□ 1.55
H2AFX-201ENST00000375167 CNTNAP1P78357 1384 aa24.73■■□□□ 1.55
H2AFX-201ENST00000375167 NKX1-1Q15270 411 aaPredicted RBP24.72■■□□□ 1.55
H2AFX-201ENST00000375167 RRS1Q15050 365 aaKnown RBP24.71■■□□□ 1.55
H2AFX-201ENST00000375167 CHRNA5P30532 468 aa24.7■■□□□ 1.55
H2AFX-201ENST00000375167 LBX1P52954 281 aa24.7■■□□□ 1.55
H2AFX-201ENST00000375167 COL5A3P25940 1745 aaPredicted RBP24.7■■□□□ 1.54
H2AFX-201ENST00000375167 ZNF831Q5JPB2 1677 aa24.7■■□□□ 1.54
H2AFX-201ENST00000375167 CCDC88AQ3V6T2 1871 aa24.69■■□□□ 1.54
H2AFX-201ENST00000375167 KDRP35968 1356 aa24.69■■□□□ 1.54
H2AFX-201ENST00000375167 L3MBTL2Q969R5 705 aa24.68■■□□□ 1.54
H2AFX-201ENST00000375167 INSRP06213 1382 aa24.68■■□□□ 1.54
H2AFX-201ENST00000375167 RC3H1Q5TC82 1133 aaKnown RBP24.67■■□□□ 1.54
H2AFX-201ENST00000375167 CHADLQ6NUI6 762 aa24.67■■□□□ 1.54
H2AFX-201ENST00000375167 SPG7Q9UQ90 795 aa24.67■■□□□ 1.54
H2AFX-201ENST00000375167 CNTNAP4Q9C0A0 1308 aa24.66■■□□□ 1.54
H2AFX-201ENST00000375167 DPY19L2Q6NUT2 758 aa24.66■■□□□ 1.54
H2AFX-201ENST00000375167 ATG3Q9NT62 314 aa24.66■■□□□ 1.54
H2AFX-201ENST00000375167 POTECB2RU33 542 aa24.65■■□□□ 1.54
H2AFX-201ENST00000375167 RPS6KA4O75676 772 aa24.65■■□□□ 1.54
H2AFX-201ENST00000375167 VIRMAQ69YN4 1812 aaKnown RBP24.64■■□□□ 1.54
H2AFX-201ENST00000375167 WBP1LQ9NX94 342 aa24.64■■□□□ 1.53
H2AFX-201ENST00000375167 FLT4P35916 1363 aa24.63■■□□□ 1.53
H2AFX-201ENST00000375167 CCDC85CA6NKD9 419 aa24.63■■□□□ 1.53
H2AFX-201ENST00000375167 RGS19P49795 217 aa24.63■■□□□ 1.53
H2AFX-201ENST00000375167 DDR1Q08345 913 aa24.63■■□□□ 1.53
H2AFX-201ENST00000375167 HSP90AB2PQ58FF8 381 aa24.63■■□□□ 1.53
H2AFX-201ENST00000375167 VEGFBP49765 207 aa24.61■■□□□ 1.53
H2AFX-201ENST00000375167 RBM42Q9BTD8 480 aaKnown RBP24.61■■□□□ 1.53
H2AFX-201ENST00000375167 DLEC1Q9Y238 1755 aa24.6■■□□□ 1.53
H2AFX-201ENST00000375167 HSPA8P11142 646 aaKnown RBP24.6■■□□□ 1.53
H2AFX-201ENST00000375167 PUS7Q96PZ0 661 aaKnown RBP24.6■■□□□ 1.53
H2AFX-201ENST00000375167 MYH14Q7Z406 1995 aaKnown RBP24.6■■□□□ 1.53
H2AFX-201ENST00000375167 FKBP8Q14318 412 aa24.59■■□□□ 1.53
H2AFX-201ENST00000375167 KIF24Q5T7B8 1368 aa24.59■■□□□ 1.53
H2AFX-201ENST00000375167 SLC4A9Q96Q91 983 aa24.58■■□□□ 1.53
H2AFX-201ENST00000375167 NCAPD2Q15021 1401 aa24.57■■□□□ 1.52
H2AFX-201ENST00000375167 USP42Q9H9J4 1324 aaKnown RBP24.57■■□□□ 1.52
H2AFX-201ENST00000375167 SRP68Q9UHB9 627 aaKnown RBP24.57■■□□□ 1.52
H2AFX-201ENST00000375167 IFNL2Q8IZJ0 200 aa24.56■■□□□ 1.52
H2AFX-201ENST00000375167 DICER1Q9UPY3 1922 aaKnown RBP24.56■■□□□ 1.52
H2AFX-201ENST00000375167 POLRMTO00411 1230 aaKnown RBP24.55■■□□□ 1.52
H2AFX-201ENST00000375167 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.55■■□□□ 1.52
H2AFX-201ENST00000375167 NFKBIEO00221 500 aa24.54■■□□□ 1.52
H2AFX-201ENST00000375167 PHKG2P15735 406 aa24.54■■□□□ 1.52
H2AFX-201ENST00000375167 PASKQ96RG2 1323 aa24.54■■□□□ 1.52
H2AFX-201ENST00000375167 TMEM88BA6NKF7 163 aa24.54■■□□□ 1.52
H2AFX-201ENST00000375167 POTEIP0CG38 1075 aa24.54■■□□□ 1.52
H2AFX-201ENST00000375167 POTEJP0CG39 1038 aa24.54■■□□□ 1.52
H2AFX-201ENST00000375167 TTLL6Q8N841 843 aa24.54■■□□□ 1.52
H2AFX-201ENST00000375167 GGNBP2Q9H3C7 697 aa24.54■■□□□ 1.52
H2AFX-201ENST00000375167 MAP2K1Q02750 393 aaPredicted RBP24.52■■□□□ 1.52
H2AFX-201ENST00000375167 AFDNP55196 1824 aaKnown RBP24.51■■□□□ 1.51
H2AFX-201ENST00000375167 ERFEQ4G0M1 354 aa24.51■■□□□ 1.51
H2AFX-201ENST00000375167 CARD11Q9BXL7 1154 aa24.51■■□□□ 1.51
H2AFX-201ENST00000375167 FYB1O15117 783 aa24.49■■□□□ 1.51
H2AFX-201ENST00000375167 LDHDQ86WU2 507 aa24.49■■□□□ 1.51
H2AFX-201ENST00000375167 TONSLQ96HA7 1378 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms