RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 C1orf141Q5JVX7 400 aa22.73■■□□□ 1.23
HLA-DQB1-201ENST00000374943 CCDC30Q5VVM6 783 aa22.73■■□□□ 1.23
HLA-DQB1-201ENST00000374943 STK31Q9BXU1 1019 aa22.72■■□□□ 1.23
HLA-DQB1-201ENST00000374943 LGR6Q9HBX8 967 aa22.72■■□□□ 1.23
HLA-DQB1-201ENST00000374943 HOXB7P09629 217 aa22.71■■□□□ 1.23
HLA-DQB1-201ENST00000374943 CABLES1Q8TDN4 633 aa22.71■■□□□ 1.23
HLA-DQB1-201ENST00000374943 PARP4Q9UKK3 1724 aaKnown RBP22.71■■□□□ 1.23
HLA-DQB1-201ENST00000374943 RNMTO43148 476 aaKnown RBP22.71■■□□□ 1.23
HLA-DQB1-201ENST00000374943 PXDNLA1KZ92 1463 aa22.7■■□□□ 1.22
HLA-DQB1-201ENST00000374943 MSH5O43196 834 aa22.7■■□□□ 1.22
HLA-DQB1-201ENST00000374943 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.7■■□□□ 1.22
HLA-DQB1-201ENST00000374943 MEGF6O75095 1541 aa22.69■■□□□ 1.22
HLA-DQB1-201ENST00000374943 TEFQ10587 303 aa22.69■■□□□ 1.22
HLA-DQB1-201ENST00000374943 EIF4A1P60842 406 aaKnown RBP22.68■■□□□ 1.22
HLA-DQB1-201ENST00000374943 CHMP4AQ9BY43 222 aa22.68■■□□□ 1.22
HLA-DQB1-201ENST00000374943 G2E3Q7L622 706 aa22.68■■□□□ 1.22
HLA-DQB1-201ENST00000374943 RAPGEF4Q8WZA2 1011 aa22.68■■□□□ 1.22
HLA-DQB1-201ENST00000374943 NLRP2Q9NX02 1062 aa22.68■■□□□ 1.22
HLA-DQB1-201ENST00000374943 MPRIPQ6WCQ1 1025 aa22.67■■□□□ 1.22
HLA-DQB1-201ENST00000374943 GCC1Q96CN9 775 aa22.67■■□□□ 1.22
HLA-DQB1-201ENST00000374943 ATP10DQ9P241 1426 aa22.67■■□□□ 1.22
HLA-DQB1-201ENST00000374943 TATP17735 454 aaPredicted RBP22.66■■□□□ 1.22
HLA-DQB1-201ENST00000374943 MRC1P22897 1456 aa22.65■■□□□ 1.22
HLA-DQB1-201ENST00000374943 CCT4P50991 539 aaKnown RBP22.65■■□□□ 1.22
HLA-DQB1-201ENST00000374943 NUCB1Q02818 461 aa22.65■■□□□ 1.22
HLA-DQB1-201ENST00000374943 BTBD11A6QL63 1104 aa22.65■■□□□ 1.22
HLA-DQB1-201ENST00000374943 FLIIQ13045 1269 aa22.65■■□□□ 1.22
HLA-DQB1-201ENST00000374943 CHRNA2Q15822 529 aa22.65■■□□□ 1.22
HLA-DQB1-201ENST00000374943 SIRT2Q8IXJ6 389 aa22.65■■□□□ 1.22
HLA-DQB1-201ENST00000374943 IPO9Q96P70 1041 aaKnown RBP22.65■■□□□ 1.22
HLA-DQB1-201ENST00000374943 C1orf115Q9H7X2 142 aa22.65■■□□□ 1.22
HLA-DQB1-201ENST00000374943 SPG7Q9UQ90 795 aa22.64■■□□□ 1.21
HLA-DQB1-201ENST00000374943 HEG1Q9ULI3 1381 aa22.64■■□□□ 1.21
HLA-DQB1-201ENST00000374943 CSB-PGBD3P0DP91 1061 aa22.63■■□□□ 1.21
HLA-DQB1-201ENST00000374943 HDGFL1Q5TGJ6 251 aa22.63■■□□□ 1.21
HLA-DQB1-201ENST00000374943 KDM6AO15550 1401 aaPredicted RBP22.63■■□□□ 1.21
HLA-DQB1-201ENST00000374943 COL5A2P05997 1499 aaPredicted RBP22.62■■□□□ 1.21
HLA-DQB1-201ENST00000374943 PHKG2P15735 406 aa22.6■■□□□ 1.21
HLA-DQB1-201ENST00000374943 RPAP2Q8IXW5 612 aaPredicted RBP22.6■■□□□ 1.21
HLA-DQB1-201ENST00000374943 ANKRD44Q8N8A2 993 aa22.6■■□□□ 1.21
HLA-DQB1-201ENST00000374943 WDR17Q8IZU2 1322 aa22.6■■□□□ 1.21
HLA-DQB1-201ENST00000374943 AHDC1Q5TGY3 1603 aaPredicted RBP22.59■■□□□ 1.21
HLA-DQB1-201ENST00000374943 CHD1LQ86WJ1 897 aa22.59■■□□□ 1.21
HLA-DQB1-201ENST00000374943 PRDM11Q9NQV5 511 aa22.59■■□□□ 1.21
HLA-DQB1-201ENST00000374943 ROBO1Q9Y6N7 1651 aa22.59■■□□□ 1.21
HLA-DQB1-201ENST00000374943 C5P01031 1676 aa22.59■■□□□ 1.21
HLA-DQB1-201ENST00000374943 KCNQ3O43525 872 aa22.58■■□□□ 1.21
HLA-DQB1-201ENST00000374943 FKBP5Q13451 457 aaPredicted RBP22.58■■□□□ 1.21
HLA-DQB1-201ENST00000374943 SHANK3Q9BYB0 1731 aa22.58■■□□□ 1.2
HLA-DQB1-201ENST00000374943 F6X3S4 739 aa22.58■■□□□ 1.2
HLA-DQB1-201ENST00000374943 NPM2Q86SE8 214 aaKnown RBP22.58■■□□□ 1.2
HLA-DQB1-201ENST00000374943 IFNL2Q8IZJ0 200 aa22.58■■□□□ 1.2
HLA-DQB1-201ENST00000374943 MEIS3Q99687 375 aa22.58■■□□□ 1.2
HLA-DQB1-201ENST00000374943 COL22A1Q8NFW1 1626 aaPredicted RBP22.58■■□□□ 1.2
HLA-DQB1-201ENST00000374943 CEP85Q6P2H3 762 aa22.57■■□□□ 1.2
HLA-DQB1-201ENST00000374943 NECTIN2Q92692 538 aa22.56■■□□□ 1.2
HLA-DQB1-201ENST00000374943 DCTPP1Q9H773 170 aa22.56■■□□□ 1.2
HLA-DQB1-201ENST00000374943 SLC4A10Q6U841 1118 aa22.55■■□□□ 1.2
HLA-DQB1-201ENST00000374943 SLC52A2Q9HAB3 445 aa22.55■■□□□ 1.2
HLA-DQB1-201ENST00000374943 GIGYF1O75420 1035 aaPredicted RBP22.54■■□□□ 1.2
HLA-DQB1-201ENST00000374943 HSP90AB1P08238 724 aaKnown RBP22.54■■□□□ 1.2
HLA-DQB1-201ENST00000374943 NOP58Q9Y2X3 529 aaKnown RBP22.54■■□□□ 1.2
HLA-DQB1-201ENST00000374943 LAMB4A4D0S4 1761 aa22.53■■□□□ 1.2
HLA-DQB1-201ENST00000374943 DCAF5Q96JK2 942 aa22.53■■□□□ 1.2
HLA-DQB1-201ENST00000374943 LNPKQ9C0E8 428 aa22.53■■□□□ 1.2
HLA-DQB1-201ENST00000374943 COL14A1Q05707 1796 aaKnown RBP22.53■■□□□ 1.2
HLA-DQB1-201ENST00000374943 CYP27B1O15528 508 aa22.52■■□□□ 1.2
HLA-DQB1-201ENST00000374943 ANKRD45Q5TZF3 282 aa22.52■■□□□ 1.2
HLA-DQB1-201ENST00000374943 DDRGK1Q96HY6 314 aa22.52■■□□□ 1.2
HLA-DQB1-201ENST00000374943 CHPF2Q9P2E5 772 aa22.52■■□□□ 1.2
HLA-DQB1-201ENST00000374943 GNAI3P08754 354 aa22.52■■□□□ 1.2
HLA-DQB1-201ENST00000374943 EIF2S2P20042 333 aaKnown RBP22.52■■□□□ 1.2
HLA-DQB1-201ENST00000374943 PHAXQ9H814 394 aaKnown RBP22.51■■□□□ 1.19
HLA-DQB1-201ENST00000374943 DBF4Q9UBU7 674 aaPredicted RBP22.51■■□□□ 1.19
HLA-DQB1-201ENST00000374943 UBR2Q8IWV8 1755 aa22.51■■□□□ 1.19
HLA-DQB1-201ENST00000374943 GNAI2P04899 355 aa22.5■■□□□ 1.19
HLA-DQB1-201ENST00000374943 CARD10Q9BWT7 1032 aa22.5■■□□□ 1.19
HLA-DQB1-201ENST00000374943 PAPPAQ13219 1627 aa22.5■■□□□ 1.19
HLA-DQB1-201ENST00000374943 GLI3P10071 1580 aa22.5■■□□□ 1.19
HLA-DQB1-201ENST00000374943 HMMRO75330 724 aa22.49■■□□□ 1.19
HLA-DQB1-201ENST00000374943 ZNF790Q6PG37 636 aa22.49■■□□□ 1.19
HLA-DQB1-201ENST00000374943 TOM1L2Q6ZVM7 507 aa22.49■■□□□ 1.19
HLA-DQB1-201ENST00000374943 ZBTB47Q9UFB7 747 aaPredicted RBP22.49■■□□□ 1.19
HLA-DQB1-201ENST00000374943 PCDH11XQ9BZA7 1347 aa22.48■■□□□ 1.19
HLA-DQB1-201ENST00000374943 PCDH11YQ9BZA8 1340 aa22.48■■□□□ 1.19
HLA-DQB1-201ENST00000374943 ERICH6Q7L0X2 663 aa22.47■■□□□ 1.19
HLA-DQB1-201ENST00000374943 PLCH1Q4KWH8 1693 aa22.47■■□□□ 1.19
HLA-DQB1-201ENST00000374943 COL16A1Q07092 1604 aaPredicted RBP22.47■■□□□ 1.19
HLA-DQB1-201ENST00000374943 SEC24BO95487 1268 aa22.46■■□□□ 1.19
HLA-DQB1-201ENST00000374943 BMP2KLQ5H9B9 411 aa22.46■■□□□ 1.19
HLA-DQB1-201ENST00000374943 ADCY9O60503 1353 aa22.46■■□□□ 1.19
HLA-DQB1-201ENST00000374943 NFATC2IPQ8NCF5 419 aa22.46■■□□□ 1.19
HLA-DQB1-201ENST00000374943 WNK3Q9BYP7 1800 aa22.45■■□□□ 1.18
HLA-DQB1-201ENST00000374943 DNAAF4Q8WXU2 420 aa22.45■■□□□ 1.18
HLA-DQB1-201ENST00000374943 SRCIN1Q9C0H9 1055 aa22.45■■□□□ 1.18
HLA-DQB1-201ENST00000374943 HYPKQ9NX55 129 aa22.45■■□□□ 1.18
HLA-DQB1-201ENST00000374943 ZCRB1Q8TBF4 217 aaKnown RBP22.44■■□□□ 1.18
HLA-DQB1-201ENST00000374943 USP44Q9H0E7 712 aa22.44■■□□□ 1.18
HLA-DQB1-201ENST00000374943 IL2RBP14784 551 aa22.43■■□□□ 1.18
HLA-DQB1-201ENST00000374943 ANP32EQ9BTT0 268 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms