RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 THUMPD2Q9BTF0 503 aaKnown RBP14.56□□□□□ -0.08
NPLOC4-202ENST00000374747 PPIP5K1Q6PFW1 1433 aa14.56□□□□□ -0.08
NPLOC4-202ENST00000374747 TAF7Q15545 349 aaPredicted RBP14.56□□□□□ -0.08
NPLOC4-202ENST00000374747 HSP90AB2PQ58FF8 381 aa14.56□□□□□ -0.08
NPLOC4-202ENST00000374747 RRP9O43818 475 aaKnown RBP14.55□□□□□ -0.08
NPLOC4-202ENST00000374747 CARD14Q9BXL6 1004 aa14.55□□□□□ -0.08
NPLOC4-202ENST00000374747 K7ELQ4 463 aaPredicted RBP14.55□□□□□ -0.08
NPLOC4-202ENST00000374747 RARSP54136 660 aaKnown RBP14.55□□□□□ -0.08
NPLOC4-202ENST00000374747 TRPM1Q7Z4N2 1603 aa14.55□□□□□ -0.08
NPLOC4-202ENST00000374747 PIP4K2AP48426 406 aaPredicted RBP14.55□□□□□ -0.08
NPLOC4-202ENST00000374747 UQCRHLA0A096LP55 91 aa14.55□□□□□ -0.08
NPLOC4-202ENST00000374747 UQCRHP07919 91 aa14.55□□□□□ -0.08
NPLOC4-202ENST00000374747 WDR33Q9C0J8 1336 aaKnown RBP14.54□□□□□ -0.08
NPLOC4-202ENST00000374747 CHD1O14646 1710 aa14.54□□□□□ -0.08
NPLOC4-202ENST00000374747 ESPNB1AK53 854 aa14.54□□□□□ -0.08
NPLOC4-202ENST00000374747 SART3Q15020 963 aaKnown RBP14.54□□□□□ -0.08
NPLOC4-202ENST00000374747 STK38Q15208 465 aa14.54□□□□□ -0.08
NPLOC4-202ENST00000374747 AEBP1Q8IUX7 1158 aa14.54□□□□□ -0.08
NPLOC4-202ENST00000374747 FBXO3Q9UK99 471 aa14.54□□□□□ -0.08
NPLOC4-202ENST00000374747 RPAP2Q8IXW5 612 aaPredicted RBP14.54□□□□□ -0.08
NPLOC4-202ENST00000374747 YTHDC2Q9H6S0 1430 aaKnown RBP14.53□□□□□ -0.08
NPLOC4-202ENST00000374747 MAGEC2Q9UBF1 373 aaPredicted RBP14.53□□□□□ -0.08
NPLOC4-202ENST00000374747 IL16Q14005 1332 aa14.53□□□□□ -0.08
NPLOC4-202ENST00000374747 PIP4K2BP78356 416 aa14.53□□□□□ -0.08
NPLOC4-202ENST00000374747 SSH1Q8WYL5 1049 aa14.53□□□□□ -0.08
NPLOC4-202ENST00000374747 TNMDQ9H2S6 317 aa14.53□□□□□ -0.08
NPLOC4-202ENST00000374747 CIZ1Q9ULV3 898 aaPredicted RBP14.53□□□□□ -0.08
NPLOC4-202ENST00000374747 TBX22Q9Y458 520 aa14.53□□□□□ -0.08
NPLOC4-202ENST00000374747 ZNF521Q96K83 1311 aa14.52□□□□□ -0.08
NPLOC4-202ENST00000374747 JMYQ8N9B5 988 aa14.52□□□□□ -0.08
NPLOC4-202ENST00000374747 SERPINC1P01008 464 aa14.52□□□□□ -0.09
NPLOC4-202ENST00000374747 MYL6BP14649 208 aa14.52□□□□□ -0.09
NPLOC4-202ENST00000374747 LRRCC1Q9C099 1032 aa14.52□□□□□ -0.09
NPLOC4-202ENST00000374747 TMEM57Q8N5G2 664 aa14.52□□□□□ -0.09
NPLOC4-202ENST00000374747 USHBP1Q8N6Y0 703 aa14.52□□□□□ -0.09
NPLOC4-202ENST00000374747 MSH6P52701 1360 aa14.52□□□□□ -0.09
NPLOC4-202ENST00000374747 BLMP54132 1417 aaPredicted RBP14.52□□□□□ -0.09
NPLOC4-202ENST00000374747 ERLIN1O75477 346 aa14.51□□□□□ -0.09
NPLOC4-202ENST00000374747 ZFYVE27Q5T4F4 411 aa14.51□□□□□ -0.09
NPLOC4-202ENST00000374747 E9PCH4 1651 aa14.51□□□□□ -0.09
NPLOC4-202ENST00000374747 MCM4P33991 863 aa14.51□□□□□ -0.09
NPLOC4-202ENST00000374747 TXLNAP40222 546 aa14.51□□□□□ -0.09
NPLOC4-202ENST00000374747 MIS18AQ9NYP9 233 aa14.51□□□□□ -0.09
NPLOC4-202ENST00000374747 BRPF1P55201 1214 aaPredicted RBP14.51□□□□□ -0.09
NPLOC4-202ENST00000374747 ZFYVE16Q7Z3T8 1539 aa14.51□□□□□ -0.09
NPLOC4-202ENST00000374747 EIF3JO75822 258 aaKnown RBP14.51□□□□□ -0.09
NPLOC4-202ENST00000374747 KRT85P78386 507 aa14.51□□□□□ -0.09
NPLOC4-202ENST00000374747 POLR3AO14802 1390 aaPredicted RBP14.51□□□□□ -0.09
NPLOC4-202ENST00000374747 KIAA0754O94854 1291 aa14.5□□□□□ -0.09
NPLOC4-202ENST00000374747 ZNHIT6Q9NWK9 470 aaKnown RBP14.5□□□□□ -0.09
NPLOC4-202ENST00000374747 CYP46A1Q9Y6A2 500 aa14.5□□□□□ -0.09
NPLOC4-202ENST00000374747 ABCC1P33527 1531 aa14.5□□□□□ -0.09
NPLOC4-202ENST00000374747 ANKRD1Q15327 319 aa14.5□□□□□ -0.09
NPLOC4-202ENST00000374747 PREX2Q70Z35 1606 aa14.5□□□□□ -0.09
NPLOC4-202ENST00000374747 ATP2B1P20020 1258 aa14.5□□□□□ -0.09
NPLOC4-202ENST00000374747 CEBPZQ03701 1054 aaKnown RBP14.5□□□□□ -0.09
NPLOC4-202ENST00000374747 SKIDA1Q1XH10 827 aa14.5□□□□□ -0.09
NPLOC4-202ENST00000374747 GOLGA6L10A6NI86 522 aa14.49□□□□□ -0.09
NPLOC4-202ENST00000374747 PRDM15P57071 1507 aaPredicted RBP14.49□□□□□ -0.09
NPLOC4-202ENST00000374747 CHD1LQ86WJ1 897 aa14.49□□□□□ -0.09
NPLOC4-202ENST00000374747 TBC1D2BQ9UPU7 963 aa14.49□□□□□ -0.09
NPLOC4-202ENST00000374747 PPFIBP1Q86W92 1011 aa14.49□□□□□ -0.09
NPLOC4-202ENST00000374747 DACH1Q9UI36 760 aa14.49□□□□□ -0.09
NPLOC4-202ENST00000374747 DNAJC2Q99543 621 aaKnown RBP14.49□□□□□ -0.09
NPLOC4-202ENST00000374747 ERLIN2O94905 339 aa14.49□□□□□ -0.09
NPLOC4-202ENST00000374747 STARD3NLO95772 234 aa14.48□□□□□ -0.09
NPLOC4-202ENST00000374747 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.48□□□□□ -0.099e-7■■■■■ 77.3
NPLOC4-202ENST00000374747 KDM2BQ8NHM5 1336 aa14.48□□□□□ -0.09
NPLOC4-202ENST00000374747 NPATQ14207 1427 aa14.48□□□□□ -0.09
NPLOC4-202ENST00000374747 KDM4AO75164 1064 aa14.48□□□□□ -0.09
NPLOC4-202ENST00000374747 NPHP3Q7Z494 1330 aa14.48□□□□□ -0.09
NPLOC4-202ENST00000374747 TNNQ9UQP3 1299 aa14.48□□□□□ -0.09
NPLOC4-202ENST00000374747 SRGAP3O43295 1099 aa14.47□□□□□ -0.09
NPLOC4-202ENST00000374747 CBFA2T2O43439 604 aa14.47□□□□□ -0.09
NPLOC4-202ENST00000374747 TRPM2O94759 1503 aa14.47□□□□□ -0.09
NPLOC4-202ENST00000374747 PIK3C2GO75747 1445 aa14.47□□□□□ -0.09
NPLOC4-202ENST00000374747 FAM177BA6PVY3 158 aa14.47□□□□□ -0.09
NPLOC4-202ENST00000374747 HSP90AB3PQ58FF7 597 aa14.47□□□□□ -0.09
NPLOC4-202ENST00000374747 MPNDQ8N594 471 aa14.47□□□□□ -0.09
NPLOC4-202ENST00000374747 ME1P48163 572 aa14.47□□□□□ -0.09
NPLOC4-202ENST00000374747 ZSCAN30Q86W11 494 aa14.47□□□□□ -0.09
NPLOC4-202ENST00000374747 LUC7LQ9NQ29 371 aaKnown RBP14.47□□□□□ -0.09
NPLOC4-202ENST00000374747 TMOD3Q9NYL9 352 aa14.47□□□□□ -0.09
NPLOC4-202ENST00000374747 CDK5RAP3Q96JB5 506 aa14.46□□□□□ -0.09
NPLOC4-202ENST00000374747 IGHDP01880 384 aa14.46□□□□□ -0.09
NPLOC4-202ENST00000374747 MPRIPQ6WCQ1 1025 aa14.46□□□□□ -0.09
NPLOC4-202ENST00000374747 CNNM1Q9NRU3 951 aa14.46□□□□□ -0.09
NPLOC4-202ENST00000374747 GOLGA6L7A0A1B0GV03 622 aa14.46□□□□□ -0.09
NPLOC4-202ENST00000374747 ZCCHC11Q5TAX3 1644 aaKnown RBP14.46□□□□□ -0.09
NPLOC4-202ENST00000374747 ANKRD24Q8TF21 1146 aa14.46□□□□□ -0.1
NPLOC4-202ENST00000374747 HMGB2P26583 209 aaKnown RBP14.46□□□□□ -0.1
NPLOC4-202ENST00000374747 CCDC158Q5M9N0 1113 aa14.46□□□□□ -0.1
NPLOC4-202ENST00000374747 LARP1Q6PKG0 1096 aaKnown RBP14.46□□□□□ -0.1
NPLOC4-202ENST00000374747 ZFYVE9O95405 1425 aa14.45□□□□□ -0.1
NPLOC4-202ENST00000374747 USP8P40818 1118 aa14.45□□□□□ -0.1
NPLOC4-202ENST00000374747 CCDC181Q5TID7 509 aa14.45□□□□□ -0.1
NPLOC4-202ENST00000374747 TXLNBQ8N3L3 684 aa14.45□□□□□ -0.1
NPLOC4-202ENST00000374747 C19orf44Q9H6X5 657 aa14.45□□□□□ -0.1
NPLOC4-202ENST00000374747 C8orf34Q49A92 452 aa14.45□□□□□ -0.1
NPLOC4-202ENST00000374747 LARP1BQ659C4 914 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms