RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 EYA1Q99502 592 aa22.02■■□□□ 1.12
PHF1-201ENST00000374512 FOXO3O43524 673 aa22.02■■□□□ 1.11
PHF1-201ENST00000374512 HTATSF1O43719 755 aaKnown RBP22.01■■□□□ 1.11
PHF1-201ENST00000374512 ZNF445P59923 1031 aa22.01■■□□□ 1.11
PHF1-201ENST00000374512 ANP32BQ92688 251 aaKnown RBP22.01■■□□□ 1.11
PHF1-201ENST00000374512 SOS1Q07889 1333 aaPredicted RBP22.01■■□□□ 1.11
PHF1-201ENST00000374512 USP54Q70EL1 1684 aa22.01■■□□□ 1.11
PHF1-201ENST00000374512 PPP1R9BQ96SB3 815 aa22■■□□□ 1.11
PHF1-201ENST00000374512 MIS18AQ9NYP9 233 aa22■■□□□ 1.11
PHF1-201ENST00000374512 SETD1BQ9UPS6 1966 aaKnown RBP22■■□□□ 1.11
PHF1-201ENST00000374512 SMARCA5O60264 1052 aaPredicted RBP21.99■■□□□ 1.11
PHF1-201ENST00000374512 GNAI2P04899 355 aa21.99■■□□□ 1.11
PHF1-201ENST00000374512 MCM2P49736 904 aa21.99■■□□□ 1.11
PHF1-201ENST00000374512 PDE1AP54750 535 aa21.99■■□□□ 1.11
PHF1-201ENST00000374512 NLRP6P59044 892 aa21.99■■□□□ 1.11
PHF1-201ENST00000374512 ADAMTSL3P82987 1691 aa21.98■■□□□ 1.11
PHF1-201ENST00000374512 NASPP49321 788 aaPredicted RBP21.98■■□□□ 1.11
PHF1-201ENST00000374512 MARF1Q9Y4F3 1742 aaKnown RBP21.97■■□□□ 1.11
PHF1-201ENST00000374512 LRRC37A3O60309 1634 aa21.97■■□□□ 1.11
PHF1-201ENST00000374512 CACNA1FO60840 1977 aa21.97■■□□□ 1.11
PHF1-201ENST00000374512 GNAI3P08754 354 aa21.96■■□□□ 1.11
PHF1-201ENST00000374512 MCTP1Q6DN14 999 aa21.96■■□□□ 1.11
PHF1-201ENST00000374512 STK31Q9BXU1 1019 aa21.96■■□□□ 1.11
PHF1-201ENST00000374512 LMBRD1Q9NUN5 540 aa21.96■■□□□ 1.11
PHF1-201ENST00000374512 AK9Q5TCS8 1911 aa21.96■■□□□ 1.11
PHF1-201ENST00000374512 HOXC9P31274 260 aa21.95■■□□□ 1.1
PHF1-201ENST00000374512 BABAM1Q9NWV8 329 aa21.94■■□□□ 1.1
PHF1-201ENST00000374512 SALL3Q9BXA9 1300 aa21.94■■□□□ 1.1
PHF1-201ENST00000374512 GNAT3A8MTJ3 354 aa21.94■■□□□ 1.1
PHF1-201ENST00000374512 APBB1O00213 710 aa21.94■■□□□ 1.1
PHF1-201ENST00000374512 ANAPC15P60006 121 aa21.94■■□□□ 1.1
PHF1-201ENST00000374512 G2E3Q7L622 706 aa21.94■■□□□ 1.1
PHF1-201ENST00000374512 NAP1L5Q96NT1 182 aaPredicted RBP21.94■■□□□ 1.1
PHF1-201ENST00000374512 SRCIN1Q9C0H9 1055 aa21.94■■□□□ 1.1
PHF1-201ENST00000374512 TUBGCP6Q96RT7 1819 aa21.93■■□□□ 1.1
PHF1-201ENST00000374512 EPB41L2O43491 1005 aaKnown RBP21.93■■□□□ 1.1
PHF1-201ENST00000374512 MCCP23508 829 aa21.93■■□□□ 1.1
PHF1-201ENST00000374512 CCDC30Q5VVM6 783 aa21.93■■□□□ 1.1
PHF1-201ENST00000374512 SLC4A10Q6U841 1118 aa21.93■■□□□ 1.1
PHF1-201ENST00000374512 LRRCC1Q9C099 1032 aa21.93■■□□□ 1.1
PHF1-201ENST00000374512 IL17RAQ96F46 866 aa21.92■■□□□ 1.1
PHF1-201ENST00000374512 N4BP2Q86UW6 1770 aaPredicted RBP21.92■■□□□ 1.1
PHF1-201ENST00000374512 ERBB4Q15303 1308 aa21.91■■□□□ 1.1
PHF1-201ENST00000374512 ABTB2Q8N961 1025 aa21.91■■□□□ 1.1
PHF1-201ENST00000374512 PHF8Q9UPP1 1060 aa21.91■■□□□ 1.1
PHF1-201ENST00000374512 FAM208AQ9UK61 1670 aaKnown RBP21.91■■□□□ 1.1
PHF1-201ENST00000374512 NWD1Q149M9 1564 aa21.91■■□□□ 1.1
PHF1-201ENST00000374512 PXDNLA1KZ92 1463 aa21.91■■□□□ 1.1
PHF1-201ENST00000374512 F6X3S4 739 aa21.91■■□□□ 1.1
PHF1-201ENST00000374512 ATP8B2P98198 1209 aa21.91■■□□□ 1.1
PHF1-201ENST00000374512 ZSCAN23Q3MJ62 389 aa21.91■■□□□ 1.1
PHF1-201ENST00000374512 HS1BP3Q53T59 392 aa21.91■■□□□ 1.1
PHF1-201ENST00000374512 AOX1Q06278 1338 aa21.9■■□□□ 1.1
PHF1-201ENST00000374512 ESYT1Q9BSJ8 1104 aa21.9■■□□□ 1.1
PHF1-201ENST00000374512 STAP2Q9UGK3 403 aa21.9■■□□□ 1.1
PHF1-201ENST00000374512 NUTM2GQ5VZR2 741 aa21.9■■□□□ 1.1
PHF1-201ENST00000374512 MAP3K5Q99683 1374 aa21.89■■□□□ 1.1
PHF1-201ENST00000374512 MX1P20591 662 aa21.89■■□□□ 1.09
PHF1-201ENST00000374512 FLIIQ13045 1269 aa21.89■■□□□ 1.09
PHF1-201ENST00000374512 CAVIN1Q6NZI2 390 aaKnown RBP21.88■■□□□ 1.09
PHF1-201ENST00000374512 ZGPATQ8N5A5 531 aaKnown RBP21.88■■□□□ 1.09
PHF1-201ENST00000374512 INTS4Q96HW7 963 aaKnown RBP21.88■■□□□ 1.09
PHF1-201ENST00000374512 ZDHHC9Q9Y397 364 aa21.88■■□□□ 1.09
PHF1-201ENST00000374512 ADGRL3Q9HAR2 1447 aa21.88■■□□□ 1.09
PHF1-201ENST00000374512 PKP1Q13835 747 aa21.88■■□□□ 1.09
PHF1-201ENST00000374512 ZSCAN30Q86W11 494 aa21.88■■□□□ 1.09
PHF1-201ENST00000374512 NEK4P51957 841 aa21.87■■□□□ 1.09
PHF1-201ENST00000374512 CUL4AQ13619 759 aa21.87■■□□□ 1.09
PHF1-201ENST00000374512 PRKCSHP14314 528 aaPredicted RBP21.87■■□□□ 1.09
PHF1-201ENST00000374512 MBD3O95983 291 aa21.86■■□□□ 1.09
PHF1-201ENST00000374512 TMX3Q96JJ7 454 aa21.86■■□□□ 1.09
PHF1-201ENST00000374512 EXOC6BQ9Y2D4 811 aa21.86■■□□□ 1.09
PHF1-201ENST00000374512 PRPF40AO75400 957 aaKnown RBP21.86■■□□□ 1.09
PHF1-201ENST00000374512 NCLP19338 710 aaKnown RBP21.86■■□□□ 1.09
PHF1-201ENST00000374512 FKBP5Q13451 457 aaPredicted RBP21.86■■□□□ 1.09
PHF1-201ENST00000374512 NPHP4O75161 1426 aaPredicted RBP21.85■■□□□ 1.09
PHF1-201ENST00000374512 TAF7Q15545 349 aaPredicted RBP21.85■■□□□ 1.09
PHF1-201ENST00000374512 IL17REQ8NFR9 667 aa21.85■■□□□ 1.09
PHF1-201ENST00000374512 LTN1O94822 1766 aa21.85■■□□□ 1.09
PHF1-201ENST00000374512 CHMLP26374 656 aa21.84■■□□□ 1.09
PHF1-201ENST00000374512 LTV1Q96GA3 475 aaPredicted RBP21.84■■□□□ 1.09
PHF1-201ENST00000374512 C14orf37Q86TY3 774 aa21.83■■□□□ 1.09
PHF1-201ENST00000374512 GPT2Q8TD30 523 aa21.83■■□□□ 1.08
PHF1-201ENST00000374512 UBE2Q2Q8WVN8 375 aa21.83■■□□□ 1.08
PHF1-201ENST00000374512 BRD1O95696 1058 aa21.82■■□□□ 1.08
PHF1-201ENST00000374512 PDLIM2Q96JY6 352 aa21.82■■□□□ 1.08
PHF1-201ENST00000374512 CHMP4AQ9BY43 222 aa21.82■■□□□ 1.08
PHF1-201ENST00000374512 RAB11FIP3O75154 756 aa21.82■■□□□ 1.08
PHF1-201ENST00000374512 RBM33Q96EV2 1170 aaKnown RBP21.82■■□□□ 1.08
PHF1-201ENST00000374512 PNMA6EA0A0J9YXQ4 647 aa21.81■■□□□ 1.08
PHF1-201ENST00000374512 LRSAM1Q6UWE0 723 aa21.81■■□□□ 1.08
PHF1-201ENST00000374512 TPM2P07951 284 aa21.8■■□□□ 1.08
PHF1-201ENST00000374512 MSNP26038 577 aaKnown RBP21.8■■□□□ 1.08
PHF1-201ENST00000374512 PSME1Q06323 249 aa21.8■■□□□ 1.08
PHF1-201ENST00000374512 ESCO1Q5FWF5 840 aa21.8■■□□□ 1.08
PHF1-201ENST00000374512 SSH3Q8TE77 659 aa21.8■■□□□ 1.08
PHF1-201ENST00000374512 NECTIN2Q92692 538 aa21.8■■□□□ 1.08
PHF1-201ENST00000374512 TRIM6-TRIM34B2RNG4 842 aa21.79■■□□□ 1.08
PHF1-201ENST00000374512 IP6K1Q92551 441 aa21.79■■□□□ 1.08
PHF1-201ENST00000374512 ANO2Q9NQ90 1003 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms