RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 BTBD11A6QL63 1104 aa21.37■■□□□ 1.01
PTPN20-203ENST00000374342 ZBTB7BO15156 539 aaPredicted RBP21.37■■□□□ 1.01
PTPN20-203ENST00000374342 SPG7Q9UQ90 795 aa21.37■■□□□ 1.01
PTPN20-203ENST00000374342 KDM6AO15550 1401 aaPredicted RBP21.36■■□□□ 1.01
PTPN20-203ENST00000374342 WDR17Q8IZU2 1322 aa21.36■■□□□ 1.01
PTPN20-203ENST00000374342 PDE4AP27815 886 aa21.36■■□□□ 1.01
PTPN20-203ENST00000374342 HDAC1Q13547 482 aaPredicted RBP21.36■■□□□ 1.01
PTPN20-203ENST00000374342 G2E3Q7L622 706 aa21.36■■□□□ 1.01
PTPN20-203ENST00000374342 C1orf115Q9H7X2 142 aa21.35■■□□□ 1.01
PTPN20-203ENST00000374342 EIF4A1P60842 406 aaKnown RBP21.35■■□□□ 1.01
PTPN20-203ENST00000374342 INTS3Q68E01 1043 aaKnown RBP21.35■■□□□ 1.01
PTPN20-203ENST00000374342 COL22A1Q8NFW1 1626 aaPredicted RBP21.34■■□□□ 1.01
PTPN20-203ENST00000374342 KCNQ3O43525 872 aa21.34■■□□□ 1.01
PTPN20-203ENST00000374342 HDGFL1Q5TGJ6 251 aa21.34■■□□□ 1.01
PTPN20-203ENST00000374342 PDZRN3Q9UPQ7 1066 aa21.33■■□□□ 1.01
PTPN20-203ENST00000374342 PHKG2P15735 406 aa21.33■■□□□ 1
PTPN20-203ENST00000374342 TOM1L2Q6ZVM7 507 aa21.33■■□□□ 1
PTPN20-203ENST00000374342 BACH2Q9BYV9 841 aa21.33■■□□□ 1
PTPN20-203ENST00000374342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.33■■□□□ 1
PTPN20-203ENST00000374342 SHANK3Q9BYB0 1731 aa21.33■■□□□ 1
PTPN20-203ENST00000374342 PHLPP1O60346 1717 aa21.32■■□□□ 1
PTPN20-203ENST00000374342 C5P01031 1676 aa21.32■■□□□ 1
PTPN20-203ENST00000374342 MRC1P22897 1456 aa21.32■■□□□ 1
PTPN20-203ENST00000374342 COL14A1Q05707 1796 aaKnown RBP21.31■■□□□ 1
PTPN20-203ENST00000374342 FLIIQ13045 1269 aa21.31■■□□□ 1
PTPN20-203ENST00000374342 COL16A1Q07092 1604 aaPredicted RBP21.3■■□□□ 1
PTPN20-203ENST00000374342 HOXB7P09629 217 aa21.3■■□□□ 1
PTPN20-203ENST00000374342 IFNL2Q8IZJ0 200 aa21.3■■□□□ 1
PTPN20-203ENST00000374342 F6X3S4 739 aa21.29■■□□□ 1
PTPN20-203ENST00000374342 STRN4Q9NRL3 753 aa21.29■■□□□ 1
PTPN20-203ENST00000374342 EIF2S2P20042 333 aaKnown RBP21.29■■□□□ 1
PTPN20-203ENST00000374342 FKBP5Q13451 457 aaPredicted RBP21.29■■□□□ 1
PTPN20-203ENST00000374342 SLC4A10Q6U841 1118 aa21.29■■□□□ 1
PTPN20-203ENST00000374342 PXDNLA1KZ92 1463 aa21.28■■□□□ 1
PTPN20-203ENST00000374342 CYP27B1O15528 508 aa21.27■■□□□ 1
PTPN20-203ENST00000374342 SMC5Q8IY18 1101 aa21.27■■□□□ 1
PTPN20-203ENST00000374342 SLC52A2Q9HAB3 445 aa21.27■■□□□ 1
PTPN20-203ENST00000374342 CCT4P50991 539 aaKnown RBP21.26■□□□□ 0.99
PTPN20-203ENST00000374342 FAM161AQ3B820 660 aa21.26■□□□□ 0.99
PTPN20-203ENST00000374342 ATP10DQ9P241 1426 aa21.26■□□□□ 0.99
PTPN20-203ENST00000374342 EVA1CP58658 441 aa21.25■□□□□ 0.99
PTPN20-203ENST00000374342 LARP1Q6PKG0 1096 aaKnown RBP21.25■□□□□ 0.99
PTPN20-203ENST00000374342 DCAF5Q96JK2 942 aa21.25■□□□□ 0.99
PTPN20-203ENST00000374342 CARD10Q9BWT7 1032 aa21.25■□□□□ 0.99
PTPN20-203ENST00000374342 CHPF2Q9P2E5 772 aa21.25■□□□□ 0.99
PTPN20-203ENST00000374342 PLCH1Q4KWH8 1693 aa21.25■□□□□ 0.99
PTPN20-203ENST00000374342 PCDH11XQ9BZA7 1347 aa21.24■□□□□ 0.99
PTPN20-203ENST00000374342 PCDH11YQ9BZA8 1340 aa21.24■□□□□ 0.99
PTPN20-203ENST00000374342 C8orf34Q49A92 452 aa21.24■□□□□ 0.99
PTPN20-203ENST00000374342 MEIS3Q99687 375 aa21.24■□□□□ 0.99
PTPN20-203ENST00000374342 HEG1Q9ULI3 1381 aa21.24■□□□□ 0.99
PTPN20-203ENST00000374342 HSP90AB1P08238 724 aaKnown RBP21.23■□□□□ 0.99
PTPN20-203ENST00000374342 CHMP4AQ9BY43 222 aa21.23■□□□□ 0.99
PTPN20-203ENST00000374342 PHAXQ9H814 394 aaKnown RBP21.23■□□□□ 0.99
PTPN20-203ENST00000374342 WNK3Q9BYP7 1800 aa21.23■□□□□ 0.99
PTPN20-203ENST00000374342 SIRT2Q8IXJ6 389 aa21.23■□□□□ 0.99
PTPN20-203ENST00000374342 LAMB4A4D0S4 1761 aa21.22■□□□□ 0.99
PTPN20-203ENST00000374342 GIGYF1O75420 1035 aaPredicted RBP21.22■□□□□ 0.99
PTPN20-203ENST00000374342 IL2RBP14784 551 aa21.22■□□□□ 0.99
PTPN20-203ENST00000374342 NFATC2IPQ8NCF5 419 aa21.22■□□□□ 0.99
PTPN20-203ENST00000374342 SLC39A6Q13433 755 aa21.21■□□□□ 0.99
PTPN20-203ENST00000374342 ZCRB1Q8TBF4 217 aaKnown RBP21.21■□□□□ 0.99
PTPN20-203ENST00000374342 ZNF790Q6PG37 636 aa21.21■□□□□ 0.99
PTPN20-203ENST00000374342 BTG4Q9NY30 223 aa21.21■□□□□ 0.99
PTPN20-203ENST00000374342 TOGARAM1Q9Y4F4 1720 aa21.2■□□□□ 0.98
PTPN20-203ENST00000374342 PRAMEF22A3QJZ6 481 aa21.2■□□□□ 0.98
PTPN20-203ENST00000374342 ANP32AP39687 249 aaKnown RBP21.2■□□□□ 0.98
PTPN20-203ENST00000374342 NPM2Q86SE8 214 aaKnown RBP21.2■□□□□ 0.98
PTPN20-203ENST00000374342 GLI3P10071 1580 aa21.2■□□□□ 0.98
PTPN20-203ENST00000374342 ANXA1P04083 346 aa21.19■□□□□ 0.98
PTPN20-203ENST00000374342 NUCB1Q02818 461 aa21.19■□□□□ 0.98
PTPN20-203ENST00000374342 GCC1Q96CN9 775 aa21.19■□□□□ 0.98
PTPN20-203ENST00000374342 PAPPAQ13219 1627 aa21.19■□□□□ 0.98
PTPN20-203ENST00000374342 UBR2Q8IWV8 1755 aa21.19■□□□□ 0.98
PTPN20-203ENST00000374342 USP35Q9P2H5 1018 aa21.18■□□□□ 0.98
PTPN20-203ENST00000374342 DBF4Q9UBU7 674 aaPredicted RBP21.18■□□□□ 0.98
PTPN20-203ENST00000374342 CABP4P57796 275 aa21.17■□□□□ 0.98
PTPN20-203ENST00000374342 CEP85Q6P2H3 762 aa21.17■□□□□ 0.98
PTPN20-203ENST00000374342 ANKRD44Q8N8A2 993 aa21.17■□□□□ 0.98
PTPN20-203ENST00000374342 NRAPQ86VF7 1730 aa21.17■□□□□ 0.98
PTPN20-203ENST00000374342 TTC5Q8N0Z6 440 aa21.17■□□□□ 0.98
PTPN20-203ENST00000374342 LNPKQ9C0E8 428 aa21.17■□□□□ 0.98
PTPN20-203ENST00000374342 CHD1LQ86WJ1 897 aa21.16■□□□□ 0.98
PTPN20-203ENST00000374342 PROSER3Q2NL68 480 aa21.16■□□□□ 0.98
PTPN20-203ENST00000374342 RPAP2Q8IXW5 612 aaPredicted RBP21.16■□□□□ 0.98
PTPN20-203ENST00000374342 PIP4K2BP78356 416 aa21.14■□□□□ 0.98
PTPN20-203ENST00000374342 ANKRD45Q5TZF3 282 aa21.14■□□□□ 0.98
PTPN20-203ENST00000374342 ZNF496Q96IT1 587 aaPredicted RBP21.14■□□□□ 0.98
PTPN20-203ENST00000374342 ADCY9O60503 1353 aa21.14■□□□□ 0.97
PTPN20-203ENST00000374342 DDX54Q8TDD1 881 aaKnown RBP21.14■□□□□ 0.97
PTPN20-203ENST00000374342 GNAI2P04899 355 aa21.13■□□□□ 0.97
PTPN20-203ENST00000374342 GNAI3P08754 354 aa21.13■□□□□ 0.97
PTPN20-203ENST00000374342 PI4KAP2A4QPH2 592 aa21.12■□□□□ 0.97
PTPN20-203ENST00000374342 PI4KAP1Q8N8J0 262 aa21.12■□□□□ 0.97
PTPN20-203ENST00000374342 DNAAF4Q8WXU2 420 aa21.12■□□□□ 0.97
PTPN20-203ENST00000374342 SRCIN1Q9C0H9 1055 aa21.12■□□□□ 0.97
PTPN20-203ENST00000374342 DISP2A7MBM2 1401 aa21.11■□□□□ 0.97
PTPN20-203ENST00000374342 TOM1O60784 492 aa21.11■□□□□ 0.97
PTPN20-203ENST00000374342 FMNL2Q96PY5 1086 aa21.11■□□□□ 0.97
PTPN20-203ENST00000374342 DCTPP1Q9H773 170 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms