RNA–Protein interactions for RNA: ENST00000374218.6

PTPN20-201, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN20, Length 2,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-201ENST00000374218 TRMT2AQ8IZ69 625 aaKnown RBP11.83□□□□□ -0.52
PTPN20-201ENST00000374218 MBIPQ9NS73 344 aa11.83□□□□□ -0.52
PTPN20-201ENST00000374218 FANCIQ9NVI1 1328 aa11.83□□□□□ -0.52
PTPN20-201ENST00000374218 THSD7AQ9UPZ6 1657 aa11.83□□□□□ -0.52
PTPN20-201ENST00000374218 PRIM1P49642 420 aaKnown RBP11.83□□□□□ -0.52
PTPN20-201ENST00000374218 DUSP27Q5VZP5 1158 aa11.83□□□□□ -0.52
PTPN20-201ENST00000374218 SPINK5Q9NQ38 1064 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-201ENST00000374218 LRRC37A3O60309 1634 aa11.82□□□□□ -0.52
PTPN20-201ENST00000374218 TSR2Q969E8 191 aaKnown RBP11.82□□□□□ -0.52
PTPN20-201ENST00000374218 MIS18AQ9NYP9 233 aa11.82□□□□□ -0.52
PTPN20-201ENST00000374218 BCL9O00512 1426 aa11.82□□□□□ -0.52
PTPN20-201ENST00000374218 CT47B1P0C2W7 299 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-201ENST00000374218 WNK3Q9BYP7 1800 aa11.81□□□□□ -0.52
PTPN20-201ENST00000374218 ZNF790Q6PG37 636 aa11.81□□□□□ -0.52
PTPN20-201ENST00000374218 ACSBG1Q96GR2 724 aa11.81□□□□□ -0.52
PTPN20-201ENST00000374218 PIGBQ92521 554 aa11.81□□□□□ -0.52
PTPN20-201ENST00000374218 SMARCC1Q92922 1105 aaPredicted RBP11.8□□□□□ -0.52
PTPN20-201ENST00000374218 SOS1Q07889 1333 aaPredicted RBP11.8□□□□□ -0.52
PTPN20-201ENST00000374218 EXOSC9Q06265 439 aaKnown RBP11.8□□□□□ -0.52
PTPN20-201ENST00000374218 ZNF428Q96B54 188 aa11.8□□□□□ -0.52
PTPN20-201ENST00000374218 DLG5Q8TDM6 1919 aa11.79□□□□□ -0.52
PTPN20-201ENST00000374218 FMNL2Q96PY5 1086 aa11.79□□□□□ -0.52
PTPN20-201ENST00000374218 MRC1P22897 1456 aa11.79□□□□□ -0.52
PTPN20-201ENST00000374218 FAM182BQ5T319 152 aa11.79□□□□□ -0.52
PTPN20-201ENST00000374218 RGS12O14924 1447 aa11.78□□□□□ -0.52
PTPN20-201ENST00000374218 SLC39A6Q13433 755 aa11.78□□□□□ -0.52
PTPN20-201ENST00000374218 EIF4A1P60842 406 aaKnown RBP11.78□□□□□ -0.52
PTPN20-201ENST00000374218 TWISTNBQ3B726 338 aaPredicted RBP11.78□□□□□ -0.52
PTPN20-201ENST00000374218 BCL11BQ9C0K0 894 aaPredicted RBP11.78□□□□□ -0.52
PTPN20-201ENST00000374218 ADAMTS7Q9UKP4 1686 aa11.78□□□□□ -0.52
PTPN20-201ENST00000374218 HOXB7P09629 217 aa11.77□□□□□ -0.52
PTPN20-201ENST00000374218 SHANK3Q9BYB0 1731 aa11.77□□□□□ -0.53
PTPN20-201ENST00000374218 HMGB2P26583 209 aaKnown RBP11.77□□□□□ -0.53
PTPN20-201ENST00000374218 KCNQ2O43526 872 aa11.77□□□□□ -0.53
PTPN20-201ENST00000374218 SNRPA1P09661 255 aaKnown RBP11.77□□□□□ -0.53
PTPN20-201ENST00000374218 TEX13AQ9BXU3 409 aaPredicted RBP11.77□□□□□ -0.53
PTPN20-201ENST00000374218 ATG3Q9NT62 314 aa11.77□□□□□ -0.53
PTPN20-201ENST00000374218 ASAP1Q9ULH1 1129 aa11.77□□□□□ -0.53
PTPN20-201ENST00000374218 ELL2O00472 640 aaPredicted RBP11.76□□□□□ -0.53
PTPN20-201ENST00000374218 PTCD1O75127 700 aaKnown RBP11.76□□□□□ -0.53
PTPN20-201ENST00000374218 C8orf58Q8NAV2 365 aa11.76□□□□□ -0.53
PTPN20-201ENST00000374218 SCN11AQ9UI33 1791 aa11.76□□□□□ -0.53
PTPN20-201ENST00000374218 KCNQ3O43525 872 aa11.76□□□□□ -0.53
PTPN20-201ENST00000374218 ZNF496Q96IT1 587 aaPredicted RBP11.76□□□□□ -0.53
PTPN20-201ENST00000374218 RBM42Q9BTD8 480 aaKnown RBP11.76□□□□□ -0.53
PTPN20-201ENST00000374218 RCAN3Q9UKA8 241 aa11.76□□□□□ -0.53
PTPN20-201ENST00000374218 VSIG10Q8N0Z9 540 aa11.75□□□□□ -0.53
PTPN20-201ENST00000374218 GIGYF1O75420 1035 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-201ENST00000374218 VAMP4O75379 141 aa11.74□□□□□ -0.53
PTPN20-201ENST00000374218 TRIM37O94972 964 aa11.74□□□□□ -0.53
PTPN20-201ENST00000374218 CCDC30Q5VVM6 783 aa11.74□□□□□ -0.53
PTPN20-201ENST00000374218 STK31Q9BXU1 1019 aa11.74□□□□□ -0.53
PTPN20-201ENST00000374218 ALDH1L2Q3SY69 923 aa11.73□□□□□ -0.53
PTPN20-201ENST00000374218 HDGFL1Q5TGJ6 251 aa11.73□□□□□ -0.53
PTPN20-201ENST00000374218 TSPYL6Q8N831 410 aa11.73□□□□□ -0.53
PTPN20-201ENST00000374218 PALLDQ8WX93 1383 aa11.73□□□□□ -0.53
PTPN20-201ENST00000374218 HEG1Q9ULI3 1381 aa11.73□□□□□ -0.53
PTPN20-201ENST00000374218 STARD3NLO95772 234 aa11.73□□□□□ -0.53
PTPN20-201ENST00000374218 SF3B2Q13435 895 aaKnown RBP11.73□□□□□ -0.53
PTPN20-201ENST00000374218 KRT24Q2M2I5 525 aa11.73□□□□□ -0.53
PTPN20-201ENST00000374218 LOC102724428A0A0B4J2F2 783 aa11.72□□□□□ -0.53
PTPN20-201ENST00000374218 EIF2S2P20042 333 aaKnown RBP11.72□□□□□ -0.53
PTPN20-201ENST00000374218 SIK1P57059 783 aa11.72□□□□□ -0.53
PTPN20-201ENST00000374218 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-201ENST00000374218 SMC4Q9NTJ3 1288 aa11.72□□□□□ -0.53
PTPN20-201ENST00000374218 RARSP54136 660 aaKnown RBP11.72□□□□□ -0.53
PTPN20-201ENST00000374218 ATP6V1AP38606 617 aa11.71□□□□□ -0.53
PTPN20-201ENST00000374218 KAT6BQ8WYB5 2073 aa11.71□□□□□ -0.53
PTPN20-201ENST00000374218 DOT1LQ8TEK3 1739 aa11.71□□□□□ -0.54
PTPN20-201ENST00000374218 APBA3O96018 575 aa11.71□□□□□ -0.54
PTPN20-201ENST00000374218 TOGARAM1Q9Y4F4 1720 aa11.71□□□□□ -0.54
PTPN20-201ENST00000374218 NPM2Q86SE8 214 aaKnown RBP11.7□□□□□ -0.54
PTPN20-201ENST00000374218 DBF4Q9UBU7 674 aaPredicted RBP11.7□□□□□ -0.54
PTPN20-201ENST00000374218 IPO8O15397 1037 aaKnown RBP11.7□□□□□ -0.54
PTPN20-201ENST00000374218 CANXP27824 592 aaKnown RBP11.7□□□□□ -0.54
PTPN20-201ENST00000374218 ERBB4Q15303 1308 aa11.7□□□□□ -0.54
PTPN20-201ENST00000374218 PTF1AQ7RTS3 328 aa11.69□□□□□ -0.54
PTPN20-201ENST00000374218 CCDC125Q86Z20 511 aa11.69□□□□□ -0.54
PTPN20-201ENST00000374218 SSH1Q8WYL5 1049 aa11.69□□□□□ -0.54
PTPN20-201ENST00000374218 CCNL1Q9UK58 526 aaPredicted RBP11.69□□□□□ -0.54
PTPN20-201ENST00000374218 SIPA1L3O60292 1781 aaPredicted RBP11.69□□□□□ -0.54
PTPN20-201ENST00000374218 KIF16BQ96L93 1317 aa11.69□□□□□ -0.54
PTPN20-201ENST00000374218 PLSCR1O15162 318 aa11.69□□□□□ -0.54
PTPN20-201ENST00000374218 SLC4A2P04920 1241 aa11.69□□□□□ -0.54
PTPN20-201ENST00000374218 SLC27A3Q5K4L6 730 aa11.69□□□□□ -0.54
PTPN20-201ENST00000374218 DNAJC10Q8IXB1 793 aa11.69□□□□□ -0.54
PTPN20-201ENST00000374218 NECTIN2Q92692 538 aa11.69□□□□□ -0.54
PTPN20-201ENST00000374218 USP16Q9Y5T5 823 aa11.69□□□□□ -0.54
PTPN20-201ENST00000374218 HYPKQ9NX55 129 aa11.69□□□□□ -0.54
PTPN20-201ENST00000374218 BRWD3Q6RI45 1802 aa11.68□□□□□ -0.54
PTPN20-201ENST00000374218 NHSQ6T4R5 1651 aa11.68□□□□□ -0.54
PTPN20-201ENST00000374218 KDM3BQ7LBC6 1761 aa11.68□□□□□ -0.54
PTPN20-201ENST00000374218 MS4A1P11836 297 aa11.68□□□□□ -0.54
PTPN20-201ENST00000374218 BRPF1P55201 1214 aaPredicted RBP11.68□□□□□ -0.54
PTPN20-201ENST00000374218 BCL2L13Q9BXK5 485 aa11.68□□□□□ -0.54
PTPN20-201ENST00000374218 DDX21Q9NR30 783 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTPN20-201ENST00000374218 KCPQ6ZWJ8 1503 aa11.68□□□□□ -0.54
PTPN20-201ENST00000374218 PRAMEF22A3QJZ6 481 aa11.67□□□□□ -0.54
PTPN20-201ENST00000374218 ITGB4P16144 1822 aa11.67□□□□□ -0.54
PTPN20-201ENST00000374218 TCERG1O14776 1098 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms