RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 USHBP1Q8N6Y0 703 aa15.96■□□□□ 0.14
PRPF4-202ENST00000374199 ROBO1Q9Y6N7 1651 aa15.96■□□□□ 0.14
PRPF4-202ENST00000374199 PDZRN3Q9UPQ7 1066 aa15.95■□□□□ 0.14
PRPF4-202ENST00000374199 COL14A1Q05707 1796 aaKnown RBP15.95■□□□□ 0.14
PRPF4-202ENST00000374199 NUCB1Q02818 461 aa15.95■□□□□ 0.14
PRPF4-202ENST00000374199 PLEKHO1Q53GL0 409 aaPredicted RBP15.94■□□□□ 0.14
PRPF4-202ENST00000374199 EIF4A1P60842 406 aaKnown RBP15.94■□□□□ 0.14
PRPF4-202ENST00000374199 TOGARAM1Q9Y4F4 1720 aa15.93■□□□□ 0.14
PRPF4-202ENST00000374199 RNMTO43148 476 aaKnown RBP15.93■□□□□ 0.14
PRPF4-202ENST00000374199 SLAIN2Q9P270 581 aa15.93■□□□□ 0.14
PRPF4-202ENST00000374199 DDX17Q92841 729 aaKnown RBP15.92■□□□□ 0.14
PRPF4-202ENST00000374199 NRAPQ86VF7 1730 aa15.92■□□□□ 0.14
PRPF4-202ENST00000374199 GCC1Q96CN9 775 aa15.92■□□□□ 0.14
PRPF4-202ENST00000374199 LRP6O75581 1613 aa15.92■□□□□ 0.14
PRPF4-202ENST00000374199 ELL2O00472 640 aaPredicted RBP15.91■□□□□ 0.14
PRPF4-202ENST00000374199 LGR6Q9HBX8 967 aa15.91■□□□□ 0.14
PRPF4-202ENST00000374199 MIS18AQ9NYP9 233 aa15.91■□□□□ 0.14
PRPF4-202ENST00000374199 LTV1Q96GA3 475 aaPredicted RBP15.91■□□□□ 0.14
PRPF4-202ENST00000374199 CCDC30Q5VVM6 783 aa15.9■□□□□ 0.14
PRPF4-202ENST00000374199 IPO9Q96P70 1041 aaKnown RBP15.89■□□□□ 0.13
PRPF4-202ENST00000374199 G2E3Q7L622 706 aa15.89■□□□□ 0.13
PRPF4-202ENST00000374199 NUP188Q5SRE5 1749 aa15.88■□□□□ 0.13
PRPF4-202ENST00000374199 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
PRPF4-202ENST00000374199 ANKRD44Q8N8A2 993 aa15.88■□□□□ 0.13
PRPF4-202ENST00000374199 CCT4P50991 539 aaKnown RBP15.88■□□□□ 0.13
PRPF4-202ENST00000374199 ZNF530Q6P9A1 599 aaPredicted RBP15.88■□□□□ 0.13
PRPF4-202ENST00000374199 CICQ96RK0 1608 aaPredicted RBP15.88■□□□□ 0.13
PRPF4-202ENST00000374199 DCTPP1Q9H773 170 aa15.87■□□□□ 0.13
PRPF4-202ENST00000374199 WDR17Q8IZU2 1322 aa15.87■□□□□ 0.13
PRPF4-202ENST00000374199 KCPQ6ZWJ8 1503 aa15.87■□□□□ 0.13
PRPF4-202ENST00000374199 DISP2A7MBM2 1401 aa15.86■□□□□ 0.13
PRPF4-202ENST00000374199 PHKG2P15735 406 aa15.86■□□□□ 0.13
PRPF4-202ENST00000374199 RPAP2Q8IXW5 612 aaPredicted RBP15.86■□□□□ 0.13
PRPF4-202ENST00000374199 CHMP4AQ9BY43 222 aa15.86■□□□□ 0.13
PRPF4-202ENST00000374199 FLIIQ13045 1269 aa15.86■□□□□ 0.13
PRPF4-202ENST00000374199 TNS2Q63HR2 1409 aa15.85■□□□□ 0.13
PRPF4-202ENST00000374199 CEP85Q6P2H3 762 aa15.85■□□□□ 0.13
PRPF4-202ENST00000374199 ARFGEF2Q9Y6D5 1785 aa15.85■□□□□ 0.13
PRPF4-202ENST00000374199 ZC3H6P61129 1189 aaKnown RBP15.84■□□□□ 0.13
PRPF4-202ENST00000374199 NKX1-1Q15270 411 aaPredicted RBP15.84■□□□□ 0.13
PRPF4-202ENST00000374199 CHD1LQ86WJ1 897 aa15.84■□□□□ 0.13
PRPF4-202ENST00000374199 NWD2Q9ULI1 1742 aa15.84■□□□□ 0.13
PRPF4-202ENST00000374199 GIGYF1O75420 1035 aaPredicted RBP15.83■□□□□ 0.12
PRPF4-202ENST00000374199 RGS3P49796 1198 aa15.83■□□□□ 0.12
PRPF4-202ENST00000374199 ADCY9O60503 1353 aa15.83■□□□□ 0.12
PRPF4-202ENST00000374199 SLC52A2Q9HAB3 445 aa15.82■□□□□ 0.12
PRPF4-202ENST00000374199 C1orf141Q5JVX7 400 aa15.82■□□□□ 0.12
PRPF4-202ENST00000374199 BTBD11A6QL63 1104 aa15.81■□□□□ 0.12
PRPF4-202ENST00000374199 KCNQ3O43525 872 aa15.81■□□□□ 0.12
PRPF4-202ENST00000374199 ANP32AP39687 249 aaKnown RBP15.81■□□□□ 0.12
PRPF4-202ENST00000374199 LRP10Q7Z4F1 713 aa15.81■□□□□ 0.12
PRPF4-202ENST00000374199 CABLES1Q8TDN4 633 aa15.81■□□□□ 0.12
PRPF4-202ENST00000374199 ITGB4P16144 1822 aa15.81■□□□□ 0.12
PRPF4-202ENST00000374199 MPRIPQ6WCQ1 1025 aa15.81■□□□□ 0.12
PRPF4-202ENST00000374199 MEIS3Q99687 375 aa15.81■□□□□ 0.12
PRPF4-202ENST00000374199 STK31Q9BXU1 1019 aa15.81■□□□□ 0.12
PRPF4-202ENST00000374199 SPG7Q9UQ90 795 aa15.81■□□□□ 0.12
PRPF4-202ENST00000374199 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.81■□□□□ 0.12
PRPF4-202ENST00000374199 CYP27B1O15528 508 aa15.81■□□□□ 0.12
PRPF4-202ENST00000374199 PHLPP1O60346 1717 aa15.81■□□□□ 0.12
PRPF4-202ENST00000374199 BMP2KLQ5H9B9 411 aa15.8■□□□□ 0.12
PRPF4-202ENST00000374199 PDIA6Q15084 440 aa15.8■□□□□ 0.12
PRPF4-202ENST00000374199 DCAF5Q96JK2 942 aa15.8■□□□□ 0.12
PRPF4-202ENST00000374199 CARD10Q9BWT7 1032 aa15.8■□□□□ 0.12
PRPF4-202ENST00000374199 TATP17735 454 aaPredicted RBP15.79■□□□□ 0.12
PRPF4-202ENST00000374199 SALL3Q9BXA9 1300 aa15.79■□□□□ 0.12
PRPF4-202ENST00000374199 TJP1Q07157 1748 aa15.79■□□□□ 0.12
PRPF4-202ENST00000374199 UTYO14607 1347 aa15.79■□□□□ 0.12
PRPF4-202ENST00000374199 HDGFL1Q5TGJ6 251 aa15.79■□□□□ 0.12
PRPF4-202ENST00000374199 IFNL2Q8IZJ0 200 aa15.79■□□□□ 0.12
PRPF4-202ENST00000374199 C1orf115Q9H7X2 142 aa15.79■□□□□ 0.12
PRPF4-202ENST00000374199 SEC24BO95487 1268 aa15.78■□□□□ 0.12
PRPF4-202ENST00000374199 TEFQ10587 303 aa15.78■□□□□ 0.12
PRPF4-202ENST00000374199 LMOD2Q6P5Q4 547 aa15.78■□□□□ 0.12
PRPF4-202ENST00000374199 RAPGEF4Q8WZA2 1011 aa15.78■□□□□ 0.12
PRPF4-202ENST00000374199 RREB1Q92766 1687 aa15.78■□□□□ 0.12
PRPF4-202ENST00000374199 COL15A1P39059 1388 aa15.77■□□□□ 0.12
PRPF4-202ENST00000374199 BEND3Q5T5X7 828 aa15.77■□□□□ 0.12
PRPF4-202ENST00000374199 HSP90AB1P08238 724 aaKnown RBP15.77■□□□□ 0.11
PRPF4-202ENST00000374199 USP44Q9H0E7 712 aa15.77■□□□□ 0.11
PRPF4-202ENST00000374199 ZNF790Q6PG37 636 aa15.76■□□□□ 0.11
PRPF4-202ENST00000374199 TBC1D32Q96NH3 1257 aa15.76■□□□□ 0.11
PRPF4-202ENST00000374199 NOP58Q9Y2X3 529 aaKnown RBP15.76■□□□□ 0.11
PRPF4-202ENST00000374199 ZNF831Q5JPB2 1677 aa15.76■□□□□ 0.11
PRPF4-202ENST00000374199 F6X3S4 739 aa15.76■□□□□ 0.11
PRPF4-202ENST00000374199 OSBPL3Q9H4L5 887 aa15.76■□□□□ 0.11
PRPF4-202ENST00000374199 DBF4Q9UBU7 674 aaPredicted RBP15.76■□□□□ 0.11
PRPF4-202ENST00000374199 POLA2Q14181 598 aa15.75■□□□□ 0.11
PRPF4-202ENST00000374199 CHRNA2Q15822 529 aa15.75■□□□□ 0.11
PRPF4-202ENST00000374199 PHAXQ9H814 394 aaKnown RBP15.75■□□□□ 0.11
PRPF4-202ENST00000374199 CHPF2Q9P2E5 772 aa15.75■□□□□ 0.11
PRPF4-202ENST00000374199 AFDNP55196 1824 aaKnown RBP15.75■□□□□ 0.11
PRPF4-202ENST00000374199 PCDH11XQ9BZA7 1347 aa15.75■□□□□ 0.11
PRPF4-202ENST00000374199 PCDH11YQ9BZA8 1340 aa15.75■□□□□ 0.11
PRPF4-202ENST00000374199 GNAI3P08754 354 aa15.75■□□□□ 0.11
PRPF4-202ENST00000374199 NLRP2Q9NX02 1062 aa15.75■□□□□ 0.11
PRPF4-202ENST00000374199 MTX1Q13505 466 aa15.74■□□□□ 0.11
PRPF4-202ENST00000374199 DDRGK1Q96HY6 314 aa15.74■□□□□ 0.11
PRPF4-202ENST00000374199 ATP8B2P98198 1209 aa15.74■□□□□ 0.11
PRPF4-202ENST00000374199 GNAI2P04899 355 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms