RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SMARCA5O60264 1052 aaPredicted RBP15.56■□□□□ 0.08
PRPF4-201ENST00000374198 CASC1Q6TDU7 716 aa15.56■□□□□ 0.08
PRPF4-201ENST00000374198 KRT222Q8N1A0 295 aa15.56■□□□□ 0.08
PRPF4-201ENST00000374198 SLC26A8Q96RN1 970 aa15.56■□□□□ 0.08
PRPF4-201ENST00000374198 BRPF1P55201 1214 aaPredicted RBP15.55■□□□□ 0.08
PRPF4-201ENST00000374198 PLCB2Q00722 1185 aa15.55■□□□□ 0.08
PRPF4-201ENST00000374198 PLEKHF1Q96S99 279 aa15.55■□□□□ 0.08
PRPF4-201ENST00000374198 REC8O95072 547 aa15.55■□□□□ 0.08
PRPF4-201ENST00000374198 CAPN2P17655 700 aa15.55■□□□□ 0.08
PRPF4-201ENST00000374198 MX1P20591 662 aa15.55■□□□□ 0.08
PRPF4-201ENST00000374198 ZFYVE9O95405 1425 aa15.54■□□□□ 0.08
PRPF4-201ENST00000374198 CUL4AQ13619 759 aa15.54■□□□□ 0.08
PRPF4-201ENST00000374198 FBXO41Q8TF61 875 aa15.54■□□□□ 0.08
PRPF4-201ENST00000374198 GOLGA6L6A8MZA4 724 aa15.54■□□□□ 0.08
PRPF4-201ENST00000374198 PIK3R4Q99570 1358 aa15.54■□□□□ 0.08
PRPF4-201ENST00000374198 KIAA1210Q9ULL0 1709 aa15.54■□□□□ 0.08
PRPF4-201ENST00000374198 AP5Z1O43299 807 aa15.53■□□□□ 0.08
PRPF4-201ENST00000374198 MCM2P49736 904 aa15.53■□□□□ 0.08
PRPF4-201ENST00000374198 NEK4P51957 841 aa15.53■□□□□ 0.08
PRPF4-201ENST00000374198 FOXD4L6Q3SYB3 417 aaPredicted RBP15.53■□□□□ 0.08
PRPF4-201ENST00000374198 FOXD4L3Q6VB84 417 aaPredicted RBP15.53■□□□□ 0.08
PRPF4-201ENST00000374198 SDSP20132 328 aa15.53■□□□□ 0.08
PRPF4-201ENST00000374198 INTS4Q96HW7 963 aaKnown RBP15.53■□□□□ 0.08
PRPF4-201ENST00000374198 NAA30Q147X3 362 aaPredicted RBP15.53■□□□□ 0.08
PRPF4-201ENST00000374198 CFAP70Q5T0N1 1121 aa15.53■□□□□ 0.08
PRPF4-201ENST00000374198 SPC24Q8NBT2 197 aa15.53■□□□□ 0.08
PRPF4-201ENST00000374198 SLC12A5Q9H2X9 1139 aa15.53■□□□□ 0.08
PRPF4-201ENST00000374198 C16orf71Q8IYS4 520 aaPredicted RBP15.52■□□□□ 0.08
PRPF4-201ENST00000374198 TMEM87AQ8NBN3 555 aa15.52■□□□□ 0.08
PRPF4-201ENST00000374198 ARHGAP45Q92619 1136 aa15.52■□□□□ 0.08
PRPF4-201ENST00000374198 KIF1BO60333 1816 aa15.52■□□□□ 0.07
PRPF4-201ENST00000374198 PLEKHG1Q9ULL1 1385 aa15.52■□□□□ 0.07
PRPF4-201ENST00000374198 FAM193AP78312 1265 aa15.52■□□□□ 0.07
PRPF4-201ENST00000374198 SBNO2Q9Y2G9 1366 aa15.51■□□□□ 0.07
PRPF4-201ENST00000374198 ERICH4A6NGS2 130 aa15.51■□□□□ 0.07
PRPF4-201ENST00000374198 ZNF428Q96B54 188 aa15.51■□□□□ 0.07
PRPF4-201ENST00000374198 TSPYL1Q9H0U9 437 aa15.51■□□□□ 0.07
PRPF4-201ENST00000374198 DCTPP1Q9H773 170 aa15.51■□□□□ 0.07
PRPF4-201ENST00000374198 FAM53CQ9NYF3 392 aa15.51■□□□□ 0.07
PRPF4-201ENST00000374198 PAXBP1Q9Y5B6 917 aa15.51■□□□□ 0.07
PRPF4-201ENST00000374198 ERC2O15083 957 aa15.5■□□□□ 0.07
PRPF4-201ENST00000374198 FUCA2Q9BTY2 467 aa15.5■□□□□ 0.07
PRPF4-201ENST00000374198 CPS1P31327 1500 aa15.5■□□□□ 0.07
PRPF4-201ENST00000374198 IRX3P78415 501 aaPredicted RBP15.5■□□□□ 0.07
PRPF4-201ENST00000374198 CCDC112Q8NEF3 446 aa15.5■□□□□ 0.07
PRPF4-201ENST00000374198 CHMP4AQ9BY43 222 aa15.5■□□□□ 0.07
PRPF4-201ENST00000374198 KLHL34Q8N239 644 aa15.49■□□□□ 0.07
PRPF4-201ENST00000374198 C16orf45Q96MC5 204 aaPredicted RBP15.49■□□□□ 0.07
PRPF4-201ENST00000374198 WDR33Q9C0J8 1336 aaKnown RBP15.49■□□□□ 0.07
PRPF4-201ENST00000374198 PTCH1Q13635 1447 aa15.49■□□□□ 0.07
PRPF4-201ENST00000374198 TRIM6-TRIM34B2RNG4 842 aa15.49■□□□□ 0.07
PRPF4-201ENST00000374198 U2SURPO15042 1029 aaKnown RBP15.49■□□□□ 0.07
PRPF4-201ENST00000374198 CREBRFQ8IUR6 639 aa15.49■□□□□ 0.07
PRPF4-201ENST00000374198 ZNF397Q8NF99 534 aaPredicted RBP15.49■□□□□ 0.07
PRPF4-201ENST00000374198 TRIM34Q9BYJ4 488 aa15.49■□□□□ 0.07
PRPF4-201ENST00000374198 MYOM2P54296 1465 aa15.49■□□□□ 0.07
PRPF4-201ENST00000374198 TNNT1P13805 278 aa15.48■□□□□ 0.07
PRPF4-201ENST00000374198 PTGS1P23219 599 aa15.48■□□□□ 0.07
PRPF4-201ENST00000374198 MRPL50Q8N5N7 158 aaKnown RBP15.48■□□□□ 0.07
PRPF4-201ENST00000374198 OTUD7AQ8TE49 926 aaPredicted RBP15.48■□□□□ 0.07
PRPF4-201ENST00000374198 USP32Q8NFA0 1604 aa15.48■□□□□ 0.07
PRPF4-201ENST00000374198 KMT5BQ4FZB7 885 aa15.47■□□□□ 0.07
PRPF4-201ENST00000374198 ABCC4O15439 1325 aa15.47■□□□□ 0.07
PRPF4-201ENST00000374198 UBE2HP62256 183 aa15.47■□□□□ 0.07
PRPF4-201ENST00000374198 GIMAP6Q6P9H5 292 aa15.46■□□□□ 0.07
PRPF4-201ENST00000374198 IFT57Q9NWB7 429 aa15.46■□□□□ 0.07
PRPF4-201ENST00000374198 UBAP1LF5GYI3 381 aa15.46■□□□□ 0.06
PRPF4-201ENST00000374198 KCNA6P17658 529 aa15.46■□□□□ 0.06
PRPF4-201ENST00000374198 SRCIN1Q9C0H9 1055 aa15.46■□□□□ 0.06
PRPF4-201ENST00000374198 CNPY2Q9Y2B0 182 aa15.46■□□□□ 0.06
PRPF4-201ENST00000374198 RPAP1Q9BWH6 1393 aaPredicted RBP15.45■□□□□ 0.06
PRPF4-201ENST00000374198 NOL8Q76FK4 1167 aaKnown RBP15.45■□□□□ 0.06
PRPF4-201ENST00000374198 TBX22Q9Y458 520 aa15.45■□□□□ 0.06
PRPF4-201ENST00000374198 TPRNQ4KMQ1 711 aa15.45■□□□□ 0.06
PRPF4-201ENST00000374198 STRCP1A6NGW2 1772 aa15.45■□□□□ 0.06
PRPF4-201ENST00000374198 RTL1A6NKG5 1358 aa15.44■□□□□ 0.06
PRPF4-201ENST00000374198 RPGRIP1LQ68CZ1 1315 aa15.44■□□□□ 0.06
PRPF4-201ENST00000374198 VAMP4O75379 141 aa15.44■□□□□ 0.06
PRPF4-201ENST00000374198 FEZ2Q9UHY8 353 aaPredicted RBP15.44■□□□□ 0.06
PRPF4-201ENST00000374198 NEXMIFQ5QGS0 1516 aa15.44■□□□□ 0.06
PRPF4-201ENST00000374198 CYP2C19P33261 490 aa15.44■□□□□ 0.06
PRPF4-201ENST00000374198 RBM6P78332 1123 aaKnown RBP15.44■□□□□ 0.06
PRPF4-201ENST00000374198 CCDC186Q7Z3E2 898 aa15.44■□□□□ 0.06
PRPF4-201ENST00000374198 NSD2O96028 1365 aa15.44■□□□□ 0.06
PRPF4-201ENST00000374198 LRMPQ12912 555 aa15.43■□□□□ 0.06
PRPF4-201ENST00000374198 HNRNPH2P55795 449 aaKnown RBP15.43■□□□□ 0.06
PRPF4-201ENST00000374198 PROSER2Q86WR7 435 aaPredicted RBP15.43■□□□□ 0.06
PRPF4-201ENST00000374198 ADAMTS13Q76LX8 1427 aa15.43■□□□□ 0.06
PRPF4-201ENST00000374198 ADGRF5Q8IZF2 1346 aa15.43■□□□□ 0.06
PRPF4-201ENST00000374198 CERS3Q8IU89 383 aa15.42■□□□□ 0.06
PRPF4-201ENST00000374198 TRERF1Q96PN7 1200 aa15.42■□□□□ 0.06
PRPF4-201ENST00000374198 ST7Q9NRC1 585 aa15.42■□□□□ 0.06
PRPF4-201ENST00000374198 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.42■□□□□ 0.06
PRPF4-201ENST00000374198 LRRC7Q96NW7 1537 aa15.42■□□□□ 0.06
PRPF4-201ENST00000374198 KIF1BPQ96EK5 621 aa15.42■□□□□ 0.06
PRPF4-201ENST00000374198 TEX2Q8IWB9 1127 aa15.41■□□□□ 0.06
PRPF4-201ENST00000374198 RGS22Q8NE09 1264 aa15.41■□□□□ 0.06
PRPF4-201ENST00000374198 NOL10Q9BSC4 688 aaKnown RBP15.41■□□□□ 0.06
PRPF4-201ENST00000374198 CCDC192P0DO97 292 aa15.41■□□□□ 0.06
PRPF4-201ENST00000374198 TPD52L1Q16890 204 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms