RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ZBTB3Q9H5J0 574 aa16.84■□□□□ 0.29
TRAF1-201ENST00000373887 EXOC6BQ9Y2D4 811 aa16.84■□□□□ 0.29
TRAF1-201ENST00000373887 TRMT112Q9UI30 125 aaKnown RBP16.84■□□□□ 0.29
TRAF1-201ENST00000373887 UQCRHLA0A096LP55 91 aa16.84■□□□□ 0.29
TRAF1-201ENST00000373887 UQCRHP07919 91 aa16.84■□□□□ 0.29
TRAF1-201ENST00000373887 MATR3P43243 847 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRAF1-201ENST00000373887 IL27Q8NEV9 243 aa16.84■□□□□ 0.29
TRAF1-201ENST00000373887 FAM135AQ9P2D6 1515 aa16.84■□□□□ 0.29
TRAF1-201ENST00000373887 RPGRQ92834 1020 aaKnown RBP16.84■□□□□ 0.29
TRAF1-201ENST00000373887 EZRP15311 586 aaKnown RBP16.83■□□□□ 0.29
TRAF1-201ENST00000373887 HSPA2P54652 639 aa16.83■□□□□ 0.29
TRAF1-201ENST00000373887 WDR63Q8IWG1 891 aa16.83■□□□□ 0.29
TRAF1-201ENST00000373887 F6X3S4 739 aa16.83■□□□□ 0.28
TRAF1-201ENST00000373887 GBP2P32456 591 aaPredicted RBP16.83■□□□□ 0.28
TRAF1-201ENST00000373887 SLC4A8Q2Y0W8 1093 aa16.83■□□□□ 0.28
TRAF1-201ENST00000373887 NOS1P29475 1434 aa16.83■□□□□ 0.28
TRAF1-201ENST00000373887 SMARCA5O60264 1052 aaPredicted RBP16.83■□□□□ 0.28
TRAF1-201ENST00000373887 CCDC102AQ96A19 550 aa16.83■□□□□ 0.28
TRAF1-201ENST00000373887 SSBP05455 408 aaKnown RBP eCLIP16.83■□□□□ 0.28
TRAF1-201ENST00000373887 STIM1Q13586 685 aa16.83■□□□□ 0.28
TRAF1-201ENST00000373887 NEBLO76041 1014 aa16.82■□□□□ 0.28
TRAF1-201ENST00000373887 CCDC192P0DO97 292 aa16.82■□□□□ 0.28
TRAF1-201ENST00000373887 PTPN23Q9H3S7 1636 aa16.82■□□□□ 0.28
TRAF1-201ENST00000373887 SSR1P43307 286 aaKnown RBP16.82■□□□□ 0.28
TRAF1-201ENST00000373887 SOGA3Q5TF21 947 aa16.82■□□□□ 0.28
TRAF1-201ENST00000373887 JARID2Q92833 1246 aaPredicted RBP16.82■□□□□ 0.28
TRAF1-201ENST00000373887 HMGN5P82970 282 aaKnown RBP16.82■□□□□ 0.28
TRAF1-201ENST00000373887 ZSCAN25Q6NSZ9 544 aa16.82■□□□□ 0.28
TRAF1-201ENST00000373887 TMOD2Q9NZR1 351 aa16.82■□□□□ 0.28
TRAF1-201ENST00000373887 PDCP20941 246 aa16.82■□□□□ 0.28
TRAF1-201ENST00000373887 LUC7LQ9NQ29 371 aaKnown RBP16.82■□□□□ 0.28
TRAF1-201ENST00000373887 CYP46A1Q9Y6A2 500 aa16.82■□□□□ 0.28
TRAF1-201ENST00000373887 URB2Q14146 1524 aaKnown RBP16.81■□□□□ 0.28
TRAF1-201ENST00000373887 AIDAQ96BJ3 306 aa16.81■□□□□ 0.28
TRAF1-201ENST00000373887 MVPQ14764 893 aaKnown RBP16.81■□□□□ 0.28
TRAF1-201ENST00000373887 TMEM57Q8N5G2 664 aa16.81■□□□□ 0.28
TRAF1-201ENST00000373887 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
TRAF1-201ENST00000373887 ERLIN1O75477 346 aa16.81■□□□□ 0.28
TRAF1-201ENST00000373887 UBAC1Q9BSL1 405 aa16.81■□□□□ 0.28
TRAF1-201ENST00000373887 DACH1Q9UI36 760 aa16.81■□□□□ 0.28
TRAF1-201ENST00000373887 MINDY4BA8MYZ0 360 aa16.81■□□□□ 0.28
TRAF1-201ENST00000373887 EIF3JO75822 258 aaKnown RBP16.81■□□□□ 0.28
TRAF1-201ENST00000373887 ZNF622Q969S3 477 aaKnown RBP eCLIP16.8■□□□□ 0.28
TRAF1-201ENST00000373887 ABCC5O15440 1437 aa16.8■□□□□ 0.28
TRAF1-201ENST00000373887 TAF7Q15545 349 aaPredicted RBP16.8■□□□□ 0.28
TRAF1-201ENST00000373887 CRACR2BQ8N4Y2 399 aaPredicted RBP16.8■□□□□ 0.28
TRAF1-201ENST00000373887 POLR3DP05423 398 aaPredicted RBP16.8■□□□□ 0.28
TRAF1-201ENST00000373887 CAVIN4Q5BKX8 364 aa16.8■□□□□ 0.28
TRAF1-201ENST00000373887 RABEP1Q15276 862 aa16.79■□□□□ 0.28
TRAF1-201ENST00000373887 TRIM22Q8IYM9 498 aa16.79■□□□□ 0.28
TRAF1-201ENST00000373887 ZNF76P36508 570 aa16.79■□□□□ 0.28
TRAF1-201ENST00000373887 JMYQ8N9B5 988 aa16.79■□□□□ 0.28
TRAF1-201ENST00000373887 CABLES1Q8TDN4 633 aa16.79■□□□□ 0.28
TRAF1-201ENST00000373887 CUL7Q14999 1698 aa16.79■□□□□ 0.28
TRAF1-201ENST00000373887 WDR78Q5VTH9 848 aa16.79■□□□□ 0.28
TRAF1-201ENST00000373887 WDR97A6NE52 1622 aa16.78■□□□□ 0.28
TRAF1-201ENST00000373887 ANKRD24Q8TF21 1146 aa16.78■□□□□ 0.28
TRAF1-201ENST00000373887 C6orf229H3BNL8 230 aa16.78■□□□□ 0.28
TRAF1-201ENST00000373887 NAIPQ13075 1403 aa16.78■□□□□ 0.28
TRAF1-201ENST00000373887 BICRAQ9NZM4 1560 aa16.78■□□□□ 0.28
TRAF1-201ENST00000373887 CHD1LQ86WJ1 897 aa16.78■□□□□ 0.28
TRAF1-201ENST00000373887 ATP5J2-PTCD1G3V325 749 aa16.78■□□□□ 0.28
TRAF1-201ENST00000373887 BOLA2Q9H3K6 86 aa16.78■□□□□ 0.28
TRAF1-201ENST00000373887 INCENPQ9NQS7 918 aa16.78■□□□□ 0.28
TRAF1-201ENST00000373887 AMOTQ4VCS5 1084 aa16.77■□□□□ 0.28
TRAF1-201ENST00000373887 DZIP1Q86YF9 867 aaKnown RBP16.77■□□□□ 0.28
TRAF1-201ENST00000373887 DYDC1Q8WWB3 177 aa16.77■□□□□ 0.28
TRAF1-201ENST00000373887 JAKMIP1Q96N16 626 aaKnown RBP16.77■□□□□ 0.28
TRAF1-201ENST00000373887 ACEP12821 1306 aa16.77■□□□□ 0.28
TRAF1-201ENST00000373887 AAMPQ13685 434 aa16.77■□□□□ 0.28
TRAF1-201ENST00000373887 KIAA1328Q86T90 577 aa16.77■□□□□ 0.28
TRAF1-201ENST00000373887 LRPPRCP42704 1394 aaKnown RBP16.76■□□□□ 0.27
TRAF1-201ENST00000373887 CBFA2T2O43439 604 aa16.76■□□□□ 0.27
TRAF1-201ENST00000373887 MCM2P49736 904 aa16.76■□□□□ 0.27
TRAF1-201ENST00000373887 PDE3AQ14432 1141 aa16.76■□□□□ 0.27
TRAF1-201ENST00000373887 GOLGA6L10A0A0M3HER8 536 aa16.76■□□□□ 0.27
TRAF1-201ENST00000373887 GRM1Q13255 1194 aa16.76■□□□□ 0.27
TRAF1-201ENST00000373887 CCDC113Q9H0I3 377 aa16.76■□□□□ 0.27
TRAF1-201ENST00000373887 CCDC8Q9H0W5 538 aaPredicted RBP16.76■□□□□ 0.27
TRAF1-201ENST00000373887 TNRQ92752 1358 aa16.76■□□□□ 0.27
TRAF1-201ENST00000373887 FAM83GA6ND36 823 aa16.76■□□□□ 0.27
TRAF1-201ENST00000373887 RFC4P35249 363 aa16.76■□□□□ 0.27
TRAF1-201ENST00000373887 MSH6P52701 1360 aa16.76■□□□□ 0.27
TRAF1-201ENST00000373887 IFIT5Q13325 482 aaKnown RBP16.76■□□□□ 0.27
TRAF1-201ENST00000373887 LARP1Q6PKG0 1096 aaKnown RBP16.76■□□□□ 0.27
TRAF1-201ENST00000373887 AEBP1Q8IUX7 1158 aa16.75■□□□□ 0.27
TRAF1-201ENST00000373887 TXLNBQ8N3L3 684 aa16.75■□□□□ 0.27
TRAF1-201ENST00000373887 NCKAP5LQ9HCH0 1330 aa16.75■□□□□ 0.27
TRAF1-201ENST00000373887 LARP1BQ659C4 914 aaKnown RBP16.75■□□□□ 0.27
TRAF1-201ENST00000373887 FILIP1Q7Z7B0 1213 aa16.75■□□□□ 0.27
TRAF1-201ENST00000373887 GRPEL1Q9HAV7 217 aa16.75■□□□□ 0.27
TRAF1-201ENST00000373887 IFIT1P09914 478 aaKnown RBP16.74■□□□□ 0.27
TRAF1-201ENST00000373887 ANXA1P04083 346 aa16.74■□□□□ 0.27
TRAF1-201ENST00000373887 MKNK2Q9HBH9 465 aa16.74■□□□□ 0.27
TRAF1-201ENST00000373887 IQCEQ6IPM2 695 aa16.74■□□□□ 0.27
TRAF1-201ENST00000373887 DDX11Q96FC9 970 aa16.74■□□□□ 0.27
TRAF1-201ENST00000373887 SPATA32Q96LK8 384 aa16.74■□□□□ 0.27
TRAF1-201ENST00000373887 PDRG1Q9NUG6 133 aa16.74■□□□□ 0.27
TRAF1-201ENST00000373887 KRT85P78386 507 aa16.73■□□□□ 0.27
TRAF1-201ENST00000373887 TAF4BQ92750 862 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms