RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 INTS3Q68E01 1043 aaKnown RBP19.9■□□□□ 0.78
HDAC8-209ENST00000373589 VIRMAQ69YN4 1812 aaKnown RBP19.9■□□□□ 0.78
HDAC8-209ENST00000373589 HOXB7P09629 217 aa19.9■□□□□ 0.78
HDAC8-209ENST00000373589 PKD1L3Q7Z443 1732 aa19.9■□□□□ 0.78
HDAC8-209ENST00000373589 STK31Q9BXU1 1019 aa19.89■□□□□ 0.77
HDAC8-209ENST00000373589 SIPA1L3O60292 1781 aaPredicted RBP19.89■□□□□ 0.77
HDAC8-209ENST00000373589 KDM6AO15550 1401 aaPredicted RBP19.89■□□□□ 0.77
HDAC8-209ENST00000373589 KCNQ3O43525 872 aa19.88■□□□□ 0.77
HDAC8-209ENST00000373589 G2E3Q7L622 706 aa19.88■□□□□ 0.77
HDAC8-209ENST00000373589 IFNL2Q8IZJ0 200 aa19.88■□□□□ 0.77
HDAC8-209ENST00000373589 CYP27B1O15528 508 aa19.87■□□□□ 0.77
HDAC8-209ENST00000373589 TOM1L2Q6ZVM7 507 aa19.87■□□□□ 0.77
HDAC8-209ENST00000373589 CARD10Q9BWT7 1032 aa19.87■□□□□ 0.77
HDAC8-209ENST00000373589 HEG1Q9ULI3 1381 aa19.86■□□□□ 0.77
HDAC8-209ENST00000373589 COL22A1Q8NFW1 1626 aaPredicted RBP19.86■□□□□ 0.77
HDAC8-209ENST00000373589 SCN11AQ9UI33 1791 aa19.86■□□□□ 0.77
HDAC8-209ENST00000373589 HDGFL1Q5TGJ6 251 aa19.85■□□□□ 0.77
HDAC8-209ENST00000373589 CHMP4AQ9BY43 222 aa19.85■□□□□ 0.77
HDAC8-209ENST00000373589 SLC52A2Q9HAB3 445 aa19.85■□□□□ 0.77
HDAC8-209ENST00000373589 CACNA1FO60840 1977 aa19.85■□□□□ 0.77
HDAC8-209ENST00000373589 FLIIQ13045 1269 aa19.84■□□□□ 0.77
HDAC8-209ENST00000373589 DCAF5Q96JK2 942 aa19.84■□□□□ 0.77
HDAC8-209ENST00000373589 PARP4Q9UKK3 1724 aaKnown RBP19.84■□□□□ 0.77
HDAC8-209ENST00000373589 MRC1P22897 1456 aa19.83■□□□□ 0.77
HDAC8-209ENST00000373589 HSP90AB1P08238 724 aaKnown RBP19.83■□□□□ 0.77
HDAC8-209ENST00000373589 PDE4AP27815 886 aa19.83■□□□□ 0.77
HDAC8-209ENST00000373589 LARP1Q6PKG0 1096 aaKnown RBP19.83■□□□□ 0.77
HDAC8-209ENST00000373589 NECTIN2Q92692 538 aa19.83■□□□□ 0.77
HDAC8-209ENST00000373589 SMC5Q8IY18 1101 aa19.82■□□□□ 0.76
HDAC8-209ENST00000373589 BACH2Q9BYV9 841 aa19.82■□□□□ 0.76
HDAC8-209ENST00000373589 PDZRN3Q9UPQ7 1066 aa19.82■□□□□ 0.76
HDAC8-209ENST00000373589 RGS3P49796 1198 aa19.82■□□□□ 0.76
HDAC8-209ENST00000373589 STRN4Q9NRL3 753 aa19.82■□□□□ 0.76
HDAC8-209ENST00000373589 GIGYF1O75420 1035 aaPredicted RBP19.81■□□□□ 0.76
HDAC8-209ENST00000373589 EVA1CP58658 441 aa19.81■□□□□ 0.76
HDAC8-209ENST00000373589 IL2RBP14784 551 aa19.8■□□□□ 0.76
HDAC8-209ENST00000373589 CCT4P50991 539 aaKnown RBP19.8■□□□□ 0.76
HDAC8-209ENST00000373589 ZCRB1Q8TBF4 217 aaKnown RBP19.8■□□□□ 0.76
HDAC8-209ENST00000373589 C1orf115Q9H7X2 142 aa19.8■□□□□ 0.76
HDAC8-209ENST00000373589 F6X3S4 739 aa19.79■□□□□ 0.76
HDAC8-209ENST00000373589 NFATC2IPQ8NCF5 419 aa19.79■□□□□ 0.76
HDAC8-209ENST00000373589 PCDH11XQ9BZA7 1347 aa19.79■□□□□ 0.76
HDAC8-209ENST00000373589 PCDH11YQ9BZA8 1340 aa19.79■□□□□ 0.76
HDAC8-209ENST00000373589 COL14A1Q05707 1796 aaKnown RBP19.79■□□□□ 0.76
HDAC8-209ENST00000373589 COL16A1Q07092 1604 aaPredicted RBP19.79■□□□□ 0.76
HDAC8-209ENST00000373589 EIF2S2P20042 333 aaKnown RBP19.79■□□□□ 0.76
HDAC8-209ENST00000373589 FKBP5Q13451 457 aaPredicted RBP19.79■□□□□ 0.76
HDAC8-209ENST00000373589 ZNF790Q6PG37 636 aa19.79■□□□□ 0.76
HDAC8-209ENST00000373589 SIRT2Q8IXJ6 389 aa19.79■□□□□ 0.76
HDAC8-209ENST00000373589 BTG4Q9NY30 223 aa19.79■□□□□ 0.76
HDAC8-209ENST00000373589 CHPF2Q9P2E5 772 aa19.77■□□□□ 0.76
HDAC8-209ENST00000373589 PXDNLA1KZ92 1463 aa19.77■□□□□ 0.76
HDAC8-209ENST00000373589 TOM1O60784 492 aa19.76■□□□□ 0.75
HDAC8-209ENST00000373589 NKX1-1Q15270 411 aaPredicted RBP19.76■□□□□ 0.75
HDAC8-209ENST00000373589 SLC4A10Q6U841 1118 aa19.76■□□□□ 0.75
HDAC8-209ENST00000373589 PHAXQ9H814 394 aaKnown RBP19.76■□□□□ 0.75
HDAC8-209ENST00000373589 PHLPP1O60346 1717 aa19.76■□□□□ 0.75
HDAC8-209ENST00000373589 SLC39A6Q13433 755 aa19.76■□□□□ 0.75
HDAC8-209ENST00000373589 MEIS3Q99687 375 aa19.76■□□□□ 0.75
HDAC8-209ENST00000373589 ATP10DQ9P241 1426 aa19.75■□□□□ 0.75
HDAC8-209ENST00000373589 DBF4Q9UBU7 674 aaPredicted RBP19.75■□□□□ 0.75
HDAC8-209ENST00000373589 FAM161AQ3B820 660 aa19.74■□□□□ 0.75
HDAC8-209ENST00000373589 GCC1Q96CN9 775 aa19.74■□□□□ 0.75
HDAC8-209ENST00000373589 SHANK3Q9BYB0 1731 aa19.74■□□□□ 0.75
HDAC8-209ENST00000373589 PRAMEF22A3QJZ6 481 aa19.73■□□□□ 0.75
HDAC8-209ENST00000373589 C8orf34Q49A92 452 aa19.73■□□□□ 0.75
HDAC8-209ENST00000373589 N4BP2Q86UW6 1770 aaPredicted RBP19.73■□□□□ 0.75
HDAC8-209ENST00000373589 CABP4P57796 275 aa19.73■□□□□ 0.75
HDAC8-209ENST00000373589 NUCB1Q02818 461 aa19.73■□□□□ 0.75
HDAC8-209ENST00000373589 RPAP2Q8IXW5 612 aaPredicted RBP19.73■□□□□ 0.75
HDAC8-209ENST00000373589 ANKRD44Q8N8A2 993 aa19.73■□□□□ 0.75
HDAC8-209ENST00000373589 ERVV-2B6SEH9 535 aa19.72■□□□□ 0.75
HDAC8-209ENST00000373589 CEP85Q6P2H3 762 aa19.71■□□□□ 0.75
HDAC8-209ENST00000373589 ZNF496Q96IT1 587 aaPredicted RBP19.71■□□□□ 0.75
HDAC8-209ENST00000373589 DISP2A7MBM2 1401 aa19.71■□□□□ 0.75
HDAC8-209ENST00000373589 ANXA1P04083 346 aa19.7■□□□□ 0.74
HDAC8-209ENST00000373589 PIP4K2BP78356 416 aa19.7■□□□□ 0.74
HDAC8-209ENST00000373589 PDIA6Q15084 440 aa19.69■□□□□ 0.74
HDAC8-209ENST00000373589 PROSER3Q2NL68 480 aa19.69■□□□□ 0.74
HDAC8-209ENST00000373589 TTC5Q8N0Z6 440 aa19.69■□□□□ 0.74
HDAC8-209ENST00000373589 DDX21Q9NR30 783 aaKnown RBP eCLIP19.69■□□□□ 0.74
HDAC8-209ENST00000373589 USP35Q9P2H5 1018 aa19.69■□□□□ 0.74
HDAC8-209ENST00000373589 C5P01031 1676 aa19.69■□□□□ 0.74
HDAC8-209ENST00000373589 ADCY9O60503 1353 aa19.68■□□□□ 0.74
HDAC8-209ENST00000373589 CHD1LQ86WJ1 897 aa19.68■□□□□ 0.74
HDAC8-209ENST00000373589 DDX54Q8TDD1 881 aaKnown RBP19.68■□□□□ 0.74
HDAC8-209ENST00000373589 FMNL2Q96PY5 1086 aa19.68■□□□□ 0.74
HDAC8-209ENST00000373589 DCTPP1Q9H773 170 aa19.68■□□□□ 0.74
HDAC8-209ENST00000373589 HYPKQ9NX55 129 aa19.68■□□□□ 0.74
HDAC8-209ENST00000373589 PI4KAP2A4QPH2 592 aa19.68■□□□□ 0.74
HDAC8-209ENST00000373589 GNAI3P08754 354 aa19.68■□□□□ 0.74
HDAC8-209ENST00000373589 SNRPA1P09661 255 aaKnown RBP19.68■□□□□ 0.74
HDAC8-209ENST00000373589 PI4KAP1Q8N8J0 262 aa19.68■□□□□ 0.74
HDAC8-209ENST00000373589 DNAAF4Q8WXU2 420 aa19.68■□□□□ 0.74
HDAC8-209ENST00000373589 GLI3P10071 1580 aa19.67■□□□□ 0.74
HDAC8-209ENST00000373589 GNAI2P04899 355 aa19.67■□□□□ 0.74
HDAC8-209ENST00000373589 PLCH1Q4KWH8 1693 aa19.66■□□□□ 0.74
HDAC8-209ENST00000373589 BEND3Q5T5X7 828 aa19.66■□□□□ 0.74
HDAC8-209ENST00000373589 USP44Q9H0E7 712 aa19.66■□□□□ 0.74
HDAC8-209ENST00000373589 SRCIN1Q9C0H9 1055 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms