RNA–Protein interactions for RNA: ENST00000373485.5

RBBP4-201, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-201ENST00000373485 WDR43Q15061 677 aaKnown RBP eCLIP12.28□□□□□ -0.44
RBBP4-201ENST00000373485 PLEKHO1Q53GL0 409 aaPredicted RBP12.28□□□□□ -0.44
RBBP4-201ENST00000373485 MRS2Q9HD23 443 aa12.28□□□□□ -0.44
RBBP4-201ENST00000373485 RSPH6AQ9H0K4 717 aa12.27□□□□□ -0.45
RBBP4-201ENST00000373485 PCDH11XQ9BZA7 1347 aa12.26□□□□□ -0.45
RBBP4-201ENST00000373485 PCDH11YQ9BZA8 1340 aa12.26□□□□□ -0.45
RBBP4-201ENST00000373485 CYP27B1O15528 508 aa12.26□□□□□ -0.45
RBBP4-201ENST00000373485 FCHSD2O94868 740 aa12.26□□□□□ -0.45
RBBP4-201ENST00000373485 FAM196AQ6ZSG2 479 aa12.26□□□□□ -0.45
RBBP4-201ENST00000373485 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.26□□□□□ -0.454e-7■□□□□ 11.2
RBBP4-201ENST00000373485 TIE1P35590 1138 aa12.25□□□□□ -0.45
RBBP4-201ENST00000373485 AMOTQ4VCS5 1084 aa12.25□□□□□ -0.45
RBBP4-201ENST00000373485 ZNF530Q6P9A1 599 aaPredicted RBP12.25□□□□□ -0.45
RBBP4-201ENST00000373485 ACSBG1Q96GR2 724 aa12.25□□□□□ -0.45
RBBP4-201ENST00000373485 DCBLD2Q96PD2 775 aa12.25□□□□□ -0.45
RBBP4-201ENST00000373485 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
RBBP4-201ENST00000373485 SHANK3Q9BYB0 1731 aa12.25□□□□□ -0.45
RBBP4-201ENST00000373485 MTHFSDQ2M296 383 aaKnown RBP12.24□□□□□ -0.45
RBBP4-201ENST00000373485 IFNL2Q8IZJ0 200 aa12.24□□□□□ -0.45
RBBP4-201ENST00000373485 PHACTR3Q96KR7 559 aa12.24□□□□□ -0.45
RBBP4-201ENST00000373485 ADAMTS8Q9UP79 889 aa12.24□□□□□ -0.45
RBBP4-201ENST00000373485 TRIM37O94972 964 aa12.23□□□□□ -0.45
RBBP4-201ENST00000373485 POTEIP0CG38 1075 aa12.23□□□□□ -0.45
RBBP4-201ENST00000373485 PHKG2P15735 406 aa12.23□□□□□ -0.45
RBBP4-201ENST00000373485 C1orf141Q5JVX7 400 aa12.23□□□□□ -0.45
RBBP4-201ENST00000373485 ASTLQ6HA08 431 aaPredicted RBP12.23□□□□□ -0.45
RBBP4-201ENST00000373485 CCDC146Q8IYE0 955 aa12.23□□□□□ -0.45
RBBP4-201ENST00000373485 NEFMP07197 916 aa12.22□□□□□ -0.45
RBBP4-201ENST00000373485 TRPC6Q9Y210 931 aa12.22□□□□□ -0.45
RBBP4-201ENST00000373485 KCNQ2O43526 872 aa12.21□□□□□ -0.45
RBBP4-201ENST00000373485 ECM2O94769 699 aaPredicted RBP12.21□□□□□ -0.45
RBBP4-201ENST00000373485 MPRIPQ6WCQ1 1025 aa12.21□□□□□ -0.45
RBBP4-201ENST00000373485 PTF1AQ7RTS3 328 aa12.21□□□□□ -0.45
RBBP4-201ENST00000373485 PNISRQ8TF01 805 aaKnown RBP12.21□□□□□ -0.45
RBBP4-201ENST00000373485 UPF1Q92900 1129 aaKnown RBP eCLIP12.21□□□□□ -0.45
RBBP4-201ENST00000373485 SYTL4Q96C24 671 aaPredicted RBP12.21□□□□□ -0.45
RBBP4-201ENST00000373485 PLEKHF1Q96S99 279 aa12.21□□□□□ -0.45
RBBP4-201ENST00000373485 PNNQ9H307 717 aaKnown RBP12.21□□□□□ -0.45
RBBP4-201ENST00000373485 PCDHB8Q9UN66 801 aa12.21□□□□□ -0.45
RBBP4-201ENST00000373485 PLEKHG2Q9H7P9 1386 aa12.21□□□□□ -0.45
RBBP4-201ENST00000373485 MAPK8IP3Q9UPT6 1336 aa12.21□□□□□ -0.46
RBBP4-201ENST00000373485 PRIM1P49642 420 aaKnown RBP12.2□□□□□ -0.46
RBBP4-201ENST00000373485 AKAP4Q5JQC9 854 aa12.2□□□□□ -0.46
RBBP4-201ENST00000373485 FAM9BQ8IZU0 186 aa12.2□□□□□ -0.46
RBBP4-201ENST00000373485 GAS2L2Q8NHY3 880 aa12.2□□□□□ -0.46
RBBP4-201ENST00000373485 KAT6BQ8WYB5 2073 aa12.2□□□□□ -0.46
RBBP4-201ENST00000373485 HSP90AB1P08238 724 aaKnown RBP12.2□□□□□ -0.46
RBBP4-201ENST00000373485 SF3B2Q13435 895 aaKnown RBP12.2□□□□□ -0.46
RBBP4-201ENST00000373485 NKX1-1Q15270 411 aaPredicted RBP12.2□□□□□ -0.46
RBBP4-201ENST00000373485 BMP2KQ9NSY1 1161 aaPredicted RBP12.2□□□□□ -0.46
RBBP4-201ENST00000373485 BCL9O00512 1426 aa12.19□□□□□ -0.46
RBBP4-201ENST00000373485 CCER2I3L3R5 266 aa12.19□□□□□ -0.46
RBBP4-201ENST00000373485 SOCS7O14512 581 aa12.19□□□□□ -0.46
RBBP4-201ENST00000373485 ATMINO43313 823 aaPredicted RBP12.19□□□□□ -0.46
RBBP4-201ENST00000373485 RNF25Q96BH1 459 aaPredicted RBP12.19□□□□□ -0.46
RBBP4-201ENST00000373485 RUNDC1Q96C34 613 aa12.19□□□□□ -0.46
RBBP4-201ENST00000373485 DCAF5Q96JK2 942 aa12.19□□□□□ -0.46
RBBP4-201ENST00000373485 BCL11BQ9C0K0 894 aaPredicted RBP12.19□□□□□ -0.46
RBBP4-201ENST00000373485 LGR6Q9HBX8 967 aa12.19□□□□□ -0.46
RBBP4-201ENST00000373485 SBF2Q86WG5 1849 aa12.18□□□□□ -0.46
RBBP4-201ENST00000373485 DOT1LQ8TEK3 1739 aa12.18□□□□□ -0.46
RBBP4-201ENST00000373485 SENP3-EIF4A1A0A087X0R7 540 aa12.18□□□□□ -0.46
RBBP4-201ENST00000373485 GNAT3A8MTJ3 354 aa12.18□□□□□ -0.46
RBBP4-201ENST00000373485 APBA3O96018 575 aa12.18□□□□□ -0.46
RBBP4-201ENST00000373485 RRP7AQ9Y3A4 280 aaKnown RBP12.18□□□□□ -0.46
RBBP4-201ENST00000373485 EP400Q96L91 3159 aa12.18□□□□□ -0.46
RBBP4-201ENST00000373485 MAP3K5Q99683 1374 aa12.17□□□□□ -0.46
RBBP4-201ENST00000373485 RIOK3O14730 519 aaKnown RBP12.17□□□□□ -0.46
RBBP4-201ENST00000373485 KDM6AO15550 1401 aaPredicted RBP12.17□□□□□ -0.46
RBBP4-201ENST00000373485 NEUROD2Q15784 382 aa12.17□□□□□ -0.46
RBBP4-201ENST00000373485 NFE2L2Q16236 605 aa12.17□□□□□ -0.46
RBBP4-201ENST00000373485 CCDC125Q86Z20 511 aa12.17□□□□□ -0.46
RBBP4-201ENST00000373485 TOGARAM1Q9Y4F4 1720 aa12.16□□□□□ -0.46
RBBP4-201ENST00000373485 TTLL13PA6NNM8 815 aa12.16□□□□□ -0.46
RBBP4-201ENST00000373485 RNMTO43148 476 aaKnown RBP12.16□□□□□ -0.46
RBBP4-201ENST00000373485 CABP4P57796 275 aa12.16□□□□□ -0.46
RBBP4-201ENST00000373485 DEFB132Q7Z7B7 95 aa12.16□□□□□ -0.46
RBBP4-201ENST00000373485 RTF1Q92541 710 aaKnown RBP12.16□□□□□ -0.46
RBBP4-201ENST00000373485 TMOD3Q9NYL9 352 aa12.16□□□□□ -0.46
RBBP4-201ENST00000373485 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
RBBP4-201ENST00000373485 ERVV-2B6SEH9 535 aa12.15□□□□□ -0.46
RBBP4-201ENST00000373485 APAF1O14727 1248 aa12.15□□□□□ -0.46
RBBP4-201ENST00000373485 TMPOP42166 694 aaKnown RBP12.15□□□□□ -0.46
RBBP4-201ENST00000373485 BAG6P46379 1132 aa12.15□□□□□ -0.46
RBBP4-201ENST00000373485 RIPK4P57078 832 aa12.15□□□□□ -0.46
RBBP4-201ENST00000373485 EN1Q05925 392 aaPredicted RBP12.15□□□□□ -0.46
RBBP4-201ENST00000373485 PDAP1Q13442 181 aaKnown RBP12.15□□□□□ -0.46
RBBP4-201ENST00000373485 DCTN1Q14203 1278 aa12.15□□□□□ -0.46
RBBP4-201ENST00000373485 MCM10Q7L590 875 aa12.15□□□□□ -0.46
RBBP4-201ENST00000373485 IL17REQ8NFR9 667 aa12.15□□□□□ -0.46
RBBP4-201ENST00000373485 PIGBQ92521 554 aa12.15□□□□□ -0.46
RBBP4-201ENST00000373485 TNS1Q9HBL0 1735 aaKnown RBP12.15□□□□□ -0.46
RBBP4-201ENST00000373485 NFATC2IPQ8NCF5 419 aa12.14□□□□□ -0.47
RBBP4-201ENST00000373485 ITGB4P16144 1822 aa12.13□□□□□ -0.47
RBBP4-201ENST00000373485 SCN11AQ9UI33 1791 aa12.13□□□□□ -0.47
RBBP4-201ENST00000373485 BTAF1O14981 1849 aa12.13□□□□□ -0.47
RBBP4-201ENST00000373485 DLG5Q8TDM6 1919 aa12.13□□□□□ -0.47
RBBP4-201ENST00000373485 HTATSF1O43719 755 aaKnown RBP12.12□□□□□ -0.47
RBBP4-201ENST00000373485 PSEN1P49768 467 aa12.12□□□□□ -0.47
RBBP4-201ENST00000373485 ATN1P54259 1190 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms