RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 NUDCQ9Y266 331 aa12.7□□□□□ -0.38
ITM2A-201ENST00000373298 MTHFSDQ2M296 383 aaKnown RBP12.7□□□□□ -0.38
ITM2A-201ENST00000373298 POTEGQ6S5H5 508 aa12.7□□□□□ -0.38
ITM2A-201ENST00000373298 KRT27Q7Z3Y8 459 aa12.7□□□□□ -0.38
ITM2A-201ENST00000373298 CDCA7Q9BWT1 371 aaPredicted RBP12.69□□□□□ -0.38
ITM2A-201ENST00000373298 SOCS7O14512 581 aa12.68□□□□□ -0.38
ITM2A-201ENST00000373298 FCHSD2O94868 740 aa12.68□□□□□ -0.38
ITM2A-201ENST00000373298 PDE3BQ13370 1112 aa12.68□□□□□ -0.38
ITM2A-201ENST00000373298 FAM9BQ8IZU0 186 aa12.68□□□□□ -0.38
ITM2A-201ENST00000373298 TOGARAM1Q9Y4F4 1720 aa12.68□□□□□ -0.38
ITM2A-201ENST00000373298 DLG5Q8TDM6 1919 aa12.68□□□□□ -0.38
ITM2A-201ENST00000373298 WDR43Q15061 677 aaKnown RBP eCLIP12.67□□□□□ -0.38
ITM2A-201ENST00000373298 SBF2Q86WG5 1849 aa12.67□□□□□ -0.38
ITM2A-201ENST00000373298 ZNF530Q6P9A1 599 aaPredicted RBP12.66□□□□□ -0.38
ITM2A-201ENST00000373298 VIRMAQ69YN4 1812 aaKnown RBP12.66□□□□□ -0.38
ITM2A-201ENST00000373298 CCER2I3L3R5 266 aa12.66□□□□□ -0.38
ITM2A-201ENST00000373298 KCNQ2O43526 872 aa12.66□□□□□ -0.38
ITM2A-201ENST00000373298 PHKG2P15735 406 aa12.66□□□□□ -0.38
ITM2A-201ENST00000373298 ACSBG1Q96GR2 724 aa12.66□□□□□ -0.38
ITM2A-201ENST00000373298 RRP7AQ9Y3A4 280 aaKnown RBP12.66□□□□□ -0.38
ITM2A-201ENST00000373298 DOT1LQ8TEK3 1739 aa12.65□□□□□ -0.38
ITM2A-201ENST00000373298 PLEKHO1Q53GL0 409 aaPredicted RBP12.65□□□□□ -0.38
ITM2A-201ENST00000373298 SPG7Q9UQ90 795 aa12.65□□□□□ -0.38
ITM2A-201ENST00000373298 PCDH11XQ9BZA7 1347 aa12.65□□□□□ -0.38
ITM2A-201ENST00000373298 PCDH11YQ9BZA8 1340 aa12.65□□□□□ -0.38
ITM2A-201ENST00000373298 KDM6AO15550 1401 aaPredicted RBP12.64□□□□□ -0.39
ITM2A-201ENST00000373298 MPRIPQ6WCQ1 1025 aa12.64□□□□□ -0.39
ITM2A-201ENST00000373298 LGR6Q9HBX8 967 aa12.64□□□□□ -0.39
ITM2A-201ENST00000373298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.39
ITM2A-201ENST00000373298 DCTN1Q14203 1278 aa12.63□□□□□ -0.39
ITM2A-201ENST00000373298 AMOTQ4VCS5 1084 aa12.63□□□□□ -0.39
ITM2A-201ENST00000373298 MAMSTRQ6ZN01 415 aa12.63□□□□□ -0.39
ITM2A-201ENST00000373298 ITGB4P16144 1822 aa12.63□□□□□ -0.39
ITM2A-201ENST00000373298 TRIM37O94972 964 aa12.62□□□□□ -0.39
ITM2A-201ENST00000373298 IFNL2Q8IZJ0 200 aa12.62□□□□□ -0.39
ITM2A-201ENST00000373298 APAF1O14727 1248 aa12.62□□□□□ -0.39
ITM2A-201ENST00000373298 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
ITM2A-201ENST00000373298 NEUROD2Q15784 382 aa12.62□□□□□ -0.39
ITM2A-201ENST00000373298 IL17REQ8NFR9 667 aa12.62□□□□□ -0.39
ITM2A-201ENST00000373298 RUNDC1Q96C34 613 aa12.62□□□□□ -0.39
ITM2A-201ENST00000373298 THUMPD2Q9BTF0 503 aaKnown RBP12.62□□□□□ -0.39
ITM2A-201ENST00000373298 SCN11AQ9UI33 1791 aa12.61□□□□□ -0.39
ITM2A-201ENST00000373298 SRCAPQ6ZRS2 3230 aa12.61□□□□□ -0.39
ITM2A-201ENST00000373298 PRIM1P49642 420 aaKnown RBP12.61□□□□□ -0.39
ITM2A-201ENST00000373298 MCM10Q7L590 875 aa12.61□□□□□ -0.39
ITM2A-201ENST00000373298 TSPYL2Q9H2G4 693 aaPredicted RBP12.61□□□□□ -0.39
ITM2A-201ENST00000373298 PCDH10Q9P2E7 1040 aa12.61□□□□□ -0.39
ITM2A-201ENST00000373298 TNS1Q9HBL0 1735 aaKnown RBP12.6□□□□□ -0.39
ITM2A-201ENST00000373298 ADAMTS7Q9UKP4 1686 aa12.6□□□□□ -0.39
ITM2A-201ENST00000373298 TMPOP42166 694 aaKnown RBP12.6□□□□□ -0.39
ITM2A-201ENST00000373298 ATN1P54259 1190 aaPredicted RBP12.6□□□□□ -0.39
ITM2A-201ENST00000373298 NFE2L2Q16236 605 aa12.6□□□□□ -0.39
ITM2A-201ENST00000373298 AKAP4Q5JQC9 854 aa12.6□□□□□ -0.39
ITM2A-201ENST00000373298 FAM196AQ6ZSG2 479 aa12.6□□□□□ -0.39
ITM2A-201ENST00000373298 KIF12Q96FN5 646 aa12.6□□□□□ -0.39
ITM2A-201ENST00000373298 NHSQ6T4R5 1651 aa12.6□□□□□ -0.39
ITM2A-201ENST00000373298 BCL9O00512 1426 aa12.59□□□□□ -0.39
ITM2A-201ENST00000373298 MAP3K5Q99683 1374 aa12.59□□□□□ -0.39
ITM2A-201ENST00000373298 PLEKHG2Q9H7P9 1386 aa12.59□□□□□ -0.39
ITM2A-201ENST00000373298 MAPK8IP3Q9UPT6 1336 aa12.59□□□□□ -0.39
ITM2A-201ENST00000373298 C1orf141Q5JVX7 400 aa12.59□□□□□ -0.39
ITM2A-201ENST00000373298 GAS2L2Q8NHY3 880 aa12.59□□□□□ -0.39
ITM2A-201ENST00000373298 SYTL4Q96C24 671 aaPredicted RBP12.59□□□□□ -0.39
ITM2A-201ENST00000373298 BTAF1O14981 1849 aa12.59□□□□□ -0.39
ITM2A-201ENST00000373298 GNAT3A8MTJ3 354 aa12.59□□□□□ -0.39
ITM2A-201ENST00000373298 RNMTO43148 476 aaKnown RBP12.59□□□□□ -0.39
ITM2A-201ENST00000373298 RIPK4P57078 832 aa12.59□□□□□ -0.39
ITM2A-201ENST00000373298 TRIM35Q9UPQ4 493 aa12.59□□□□□ -0.39
ITM2A-201ENST00000373298 SALL2Q9Y467 1007 aaPredicted RBP12.59□□□□□ -0.39
ITM2A-201ENST00000373298 PIGBQ92521 554 aa12.58□□□□□ -0.4
ITM2A-201ENST00000373298 UPF1Q92900 1129 aaKnown RBP eCLIP12.58□□□□□ -0.4
ITM2A-201ENST00000373298 DCAF5Q96JK2 942 aa12.58□□□□□ -0.4
ITM2A-201ENST00000373298 NFATC2IPQ8NCF5 419 aa12.57□□□□□ -0.4
ITM2A-201ENST00000373298 SIPA1L3O60292 1781 aaPredicted RBP12.57□□□□□ -0.4
ITM2A-201ENST00000373298 LCE2DQ5TA82 110 aaPredicted RBP12.56□□□□□ -0.4
ITM2A-201ENST00000373298 DEFB132Q7Z7B7 95 aa12.56□□□□□ -0.4
ITM2A-201ENST00000373298 CEMIPQ8WUJ3 1361 aa12.56□□□□□ -0.4
ITM2A-201ENST00000373298 PNNQ9H307 717 aaKnown RBP12.55□□□□□ -0.4
ITM2A-201ENST00000373298 MIS18AQ9NYP9 233 aa12.55□□□□□ -0.4
ITM2A-201ENST00000373298 POTEFA5A3E0 1075 aa12.55□□□□□ -0.4
ITM2A-201ENST00000373298 KCNQ4P56696 695 aa12.55□□□□□ -0.4
ITM2A-201ENST00000373298 BCL11BQ9C0K0 894 aaPredicted RBP12.55□□□□□ -0.4
ITM2A-201ENST00000373298 ASAP1Q9ULH1 1129 aa12.55□□□□□ -0.4
ITM2A-201ENST00000373298 MRC1P22897 1456 aa12.54□□□□□ -0.4
ITM2A-201ENST00000373298 KCNQ3O43525 872 aa12.54□□□□□ -0.4
ITM2A-201ENST00000373298 NEFMP07197 916 aa12.54□□□□□ -0.4
ITM2A-201ENST00000373298 SLC39A6Q13433 755 aa12.54□□□□□ -0.4
ITM2A-201ENST00000373298 SLC52A2Q9HAB3 445 aa12.54□□□□□ -0.4
ITM2A-201ENST00000373298 ERVV-2B6SEH9 535 aa12.53□□□□□ -0.4
ITM2A-201ENST00000373298 APBA3O96018 575 aa12.53□□□□□ -0.4
ITM2A-201ENST00000373298 HSP90AB1P08238 724 aaKnown RBP12.53□□□□□ -0.4
ITM2A-201ENST00000373298 CABP4P57796 275 aa12.53□□□□□ -0.4
ITM2A-201ENST00000373298 EN1Q05925 392 aaPredicted RBP12.53□□□□□ -0.4
ITM2A-201ENST00000373298 BMP2KQ9NSY1 1161 aaPredicted RBP12.53□□□□□ -0.4
ITM2A-201ENST00000373298 TMOD3Q9NYL9 352 aa12.53□□□□□ -0.4
ITM2A-201ENST00000373298 RTF1Q92541 710 aaKnown RBP12.52□□□□□ -0.4
ITM2A-201ENST00000373298 ATG3Q9NT62 314 aa12.52□□□□□ -0.4
ITM2A-201ENST00000373298 SLC4A9Q96Q91 983 aa12.51□□□□□ -0.41
ITM2A-201ENST00000373298 PAPPAQ13219 1627 aa12.51□□□□□ -0.41
ITM2A-201ENST00000373298 HTATSF1O43719 755 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms