RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 HSP90AB4PQ58FF6 505 aa13.28□□□□□ -0.28
LCN2-202ENST00000372998 CYB5RLQ6IPT4 315 aa13.28□□□□□ -0.28
LCN2-202ENST00000372998 ZSCAN30Q86W11 494 aa13.28□□□□□ -0.28
LCN2-202ENST00000372998 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
LCN2-202ENST00000372998 TBX22Q9Y458 520 aa13.28□□□□□ -0.28
LCN2-202ENST00000372998 FBLN1P23142 703 aa13.27□□□□□ -0.29
LCN2-202ENST00000372998 MSNP26038 577 aaKnown RBP13.27□□□□□ -0.29
LCN2-202ENST00000372998 DCTN1Q14203 1278 aa13.27□□□□□ -0.29
LCN2-202ENST00000372998 MCTP1Q6DN14 999 aa13.27□□□□□ -0.29
LCN2-202ENST00000372998 NAP1L5Q96NT1 182 aaPredicted RBP13.27□□□□□ -0.29
LCN2-202ENST00000372998 MEIS3Q99687 375 aa13.27□□□□□ -0.29
LCN2-202ENST00000372998 PANK2Q9BZ23 570 aa13.27□□□□□ -0.29
LCN2-202ENST00000372998 GNAT3A8MTJ3 354 aa13.26□□□□□ -0.29
LCN2-202ENST00000372998 CD2BP2O95400 341 aaKnown RBP13.26□□□□□ -0.29
LCN2-202ENST00000372998 HOXB7P09629 217 aa13.26□□□□□ -0.29
LCN2-202ENST00000372998 AMPHP49418 695 aa13.26□□□□□ -0.29
LCN2-202ENST00000372998 CUL4AQ13619 759 aa13.26□□□□□ -0.29
LCN2-202ENST00000372998 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.26□□□□□ -0.29
LCN2-202ENST00000372998 MCM10Q7L590 875 aa13.26□□□□□ -0.29
LCN2-202ENST00000372998 LMBRD1Q9NUN5 540 aa13.26□□□□□ -0.29
LCN2-202ENST00000372998 AK9Q5TCS8 1911 aa13.25□□□□□ -0.29
LCN2-202ENST00000372998 ARHGAP23Q9P227 1491 aa13.25□□□□□ -0.29
LCN2-202ENST00000372998 LETM1O95202 739 aaPredicted RBP13.25□□□□□ -0.29
LCN2-202ENST00000372998 MX1P20591 662 aa13.25□□□□□ -0.29
LCN2-202ENST00000372998 CSPP1Q1MSJ5 1256 aa13.25□□□□□ -0.29
LCN2-202ENST00000372998 AEBP1Q8IUX7 1158 aa13.25□□□□□ -0.29
LCN2-202ENST00000372998 ESYT1Q9BSJ8 1104 aa13.25□□□□□ -0.29
LCN2-202ENST00000372998 RBM42Q9BTD8 480 aaKnown RBP13.25□□□□□ -0.29
LCN2-202ENST00000372998 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
LCN2-202ENST00000372998 KIF13AQ9H1H9 1805 aa13.25□□□□□ -0.29
LCN2-202ENST00000372998 ADGRL3Q9HAR2 1447 aa13.24□□□□□ -0.29
LCN2-202ENST00000372998 MAP3K5Q99683 1374 aa13.24□□□□□ -0.29
LCN2-202ENST00000372998 MAP3K19Q56UN5 1328 aa13.24□□□□□ -0.29
LCN2-202ENST00000372998 SALL3Q9BXA9 1300 aa13.24□□□□□ -0.29
LCN2-202ENST00000372998 RRP9O43818 475 aaKnown RBP13.24□□□□□ -0.29
LCN2-202ENST00000372998 MLECQ14165 292 aa13.24□□□□□ -0.29
LCN2-202ENST00000372998 ARXQ96QS3 562 aa13.24□□□□□ -0.29
LCN2-202ENST00000372998 SENP3Q9H4L4 574 aaPredicted RBP13.24□□□□□ -0.29
LCN2-202ENST00000372998 FLIIQ13045 1269 aa13.23□□□□□ -0.29
LCN2-202ENST00000372998 TAF7Q15545 349 aaPredicted RBP13.23□□□□□ -0.29
LCN2-202ENST00000372998 MTHFSDQ2M296 383 aaKnown RBP13.23□□□□□ -0.29
LCN2-202ENST00000372998 ZSCAN23Q3MJ62 389 aa13.23□□□□□ -0.29
LCN2-202ENST00000372998 HSP90AB2PQ58FF8 381 aa13.23□□□□□ -0.29
LCN2-202ENST00000372998 SLC4A10Q6U841 1118 aa13.23□□□□□ -0.29
LCN2-202ENST00000372998 C16orf71Q8IYS4 520 aaPredicted RBP13.23□□□□□ -0.29
LCN2-202ENST00000372998 NGDNQ8NEJ9 315 aaKnown RBP13.23□□□□□ -0.29
LCN2-202ENST00000372998 FOXD4L1Q9NU39 408 aa13.23□□□□□ -0.29
LCN2-202ENST00000372998 ATP6V1DQ9Y5K8 247 aa13.23□□□□□ -0.29
LCN2-202ENST00000372998 PIK3C2AO00443 1686 aa13.22□□□□□ -0.29
LCN2-202ENST00000372998 WDR33Q9C0J8 1336 aaKnown RBP13.22□□□□□ -0.29
LCN2-202ENST00000372998 NEK4P51957 841 aa13.22□□□□□ -0.29
LCN2-202ENST00000372998 FKBP5Q13451 457 aaPredicted RBP13.22□□□□□ -0.29
LCN2-202ENST00000372998 LRSAM1Q6UWE0 723 aa13.22□□□□□ -0.29
LCN2-202ENST00000372998 GAS2L3Q86XJ1 694 aa13.22□□□□□ -0.29
LCN2-202ENST00000372998 FAM184AQ8NB25 1140 aa13.22□□□□□ -0.29
LCN2-202ENST00000372998 CCDC39Q9UFE4 941 aa13.22□□□□□ -0.29
LCN2-202ENST00000372998 UBTFL1P0CB47 393 aaPredicted RBP13.21□□□□□ -0.29
LCN2-202ENST00000372998 CAVIN1Q6NZI2 390 aaKnown RBP13.21□□□□□ -0.29
LCN2-202ENST00000372998 RUFY2Q8WXA3 655 aa13.21□□□□□ -0.29
LCN2-202ENST00000372998 SMARCA5O60264 1052 aaPredicted RBP13.2□□□□□ -0.3
LCN2-202ENST00000372998 BRD1O95696 1058 aa13.2□□□□□ -0.3
LCN2-202ENST00000372998 CHMLP26374 656 aa13.2□□□□□ -0.3
LCN2-202ENST00000372998 UVSSAQ2YD98 709 aa13.2□□□□□ -0.3
LCN2-202ENST00000372998 THEMISQ8N1K5 641 aaPredicted RBP13.2□□□□□ -0.3
LCN2-202ENST00000372998 SSH3Q8TE77 659 aa13.2□□□□□ -0.3
LCN2-202ENST00000372998 UBE2Q2Q8WVN8 375 aa13.2□□□□□ -0.3
LCN2-202ENST00000372998 TMX3Q96JJ7 454 aa13.2□□□□□ -0.3
LCN2-202ENST00000372998 PDLIM2Q96JY6 352 aa13.2□□□□□ -0.3
LCN2-202ENST00000372998 PRPF40AO75400 957 aaKnown RBP13.19□□□□□ -0.3
LCN2-202ENST00000372998 CNTROBQ8N137 903 aa13.19□□□□□ -0.3
LCN2-202ENST00000372998 KIF1BPQ96EK5 621 aa13.19□□□□□ -0.3
LCN2-202ENST00000372998 GPATCH3Q96I76 525 aa13.19□□□□□ -0.3
LCN2-202ENST00000372998 MAP7D2Q96T17 732 aa13.19□□□□□ -0.3
LCN2-202ENST00000372998 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.19□□□□□ -0.3
LCN2-202ENST00000372998 OVOS2A0A0G2JMS6 1433 aa13.19□□□□□ -0.3
LCN2-202ENST00000372998 TTC41PQ6P2S7 1318 aa13.18□□□□□ -0.3
LCN2-202ENST00000372998 NCKAP5LQ9HCH0 1330 aa13.18□□□□□ -0.3
LCN2-202ENST00000372998 PHRF1Q9P1Y6 1649 aaKnown RBP13.18□□□□□ -0.3
LCN2-202ENST00000372998 TRIM6-TRIM34B2RNG4 842 aa13.18□□□□□ -0.3
LCN2-202ENST00000372998 ZNF500O60304 480 aaPredicted RBP13.18□□□□□ -0.3
LCN2-202ENST00000372998 OFD1O75665 1012 aa13.18□□□□□ -0.3
LCN2-202ENST00000372998 KIAA1211Q6ZU35 1233 aa13.18□□□□□ -0.3
LCN2-202ENST00000372998 ERC1Q8IUD2 1116 aa13.18□□□□□ -0.3
LCN2-202ENST00000372998 OTUD7AQ8TE49 926 aaPredicted RBP13.18□□□□□ -0.3
LCN2-202ENST00000372998 EYA1Q99502 592 aa13.18□□□□□ -0.3
LCN2-202ENST00000372998 NOL7Q9UMY1 257 aaKnown RBP13.18□□□□□ -0.3
LCN2-202ENST00000372998 AMOTL2Q9Y2J4 779 aa13.18□□□□□ -0.3
LCN2-202ENST00000372998 NCAPD2Q15021 1401 aa13.18□□□□□ -0.3
LCN2-202ENST00000372998 CEP170BQ9Y4F5 1589 aaPredicted RBP13.17□□□□□ -0.3
LCN2-202ENST00000372998 APBB1O00213 710 aa13.17□□□□□ -0.3
LCN2-202ENST00000372998 HIP1O00291 1037 aa13.17□□□□□ -0.3
LCN2-202ENST00000372998 PLEKHG5O94827 1062 aa13.17□□□□□ -0.3
LCN2-202ENST00000372998 KRT24Q2M2I5 525 aa13.17□□□□□ -0.3
LCN2-202ENST00000372998 MTERF4Q7Z6M4 381 aaKnown RBP13.17□□□□□ -0.3
LCN2-202ENST00000372998 ANO2Q9NQ90 1003 aa13.17□□□□□ -0.3
LCN2-202ENST00000372998 KDM3BQ7LBC6 1761 aa13.17□□□□□ -0.3
LCN2-202ENST00000372998 USP42Q9H9J4 1324 aaKnown RBP13.16□□□□□ -0.3
LCN2-202ENST00000372998 HOXC9P31274 260 aa13.16□□□□□ -0.3
LCN2-202ENST00000372998 HSPA4P34932 840 aa13.16□□□□□ -0.3
LCN2-202ENST00000372998 G2E3Q7L622 706 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms