RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 PLEKHO1Q53GL0 409 aaPredicted RBP16.77■□□□□ 0.27
CSTF2-201ENST00000372972 TBC1D32Q96NH3 1257 aa16.77■□□□□ 0.27
CSTF2-201ENST00000372972 DCTPP1Q9H773 170 aa16.77■□□□□ 0.27
CSTF2-201ENST00000372972 AMOTQ4VCS5 1084 aa16.76■□□□□ 0.27
CSTF2-201ENST00000372972 AKAP4Q5JQC9 854 aa16.75■□□□□ 0.27
CSTF2-201ENST00000372972 NHSL1Q5SYE7 1610 aa16.75■□□□□ 0.27
CSTF2-201ENST00000372972 CPDO75976 1380 aa16.75■□□□□ 0.27
CSTF2-201ENST00000372972 BMP2KLQ5H9B9 411 aa16.74■□□□□ 0.27
CSTF2-201ENST00000372972 SLC4A10Q6U841 1118 aa16.74■□□□□ 0.27
CSTF2-201ENST00000372972 MEIS3Q99687 375 aa16.74■□□□□ 0.27
CSTF2-201ENST00000372972 LGR6Q9HBX8 967 aa16.74■□□□□ 0.27
CSTF2-201ENST00000372972 LMO7Q8WWI1 1683 aa16.74■□□□□ 0.27
CSTF2-201ENST00000372972 F6X3S4 739 aa16.73■□□□□ 0.27
CSTF2-201ENST00000372972 FLIIQ13045 1269 aa16.73■□□□□ 0.27
CSTF2-201ENST00000372972 CEP85Q6P2H3 762 aa16.73■□□□□ 0.27
CSTF2-201ENST00000372972 ZNF530Q6P9A1 599 aaPredicted RBP16.73■□□□□ 0.27
CSTF2-201ENST00000372972 ABCC6O95255 1503 aa16.73■□□□□ 0.27
CSTF2-201ENST00000372972 ATP10DQ9P241 1426 aa16.73■□□□□ 0.27
CSTF2-201ENST00000372972 NLRP2Q9NX02 1062 aa16.73■□□□□ 0.27
CSTF2-201ENST00000372972 LTBP4Q8N2S1 1624 aa16.73■□□□□ 0.27
CSTF2-201ENST00000372972 BECN1Q14457 450 aa16.72■□□□□ 0.27
CSTF2-201ENST00000372972 FKBP5Q13451 457 aaPredicted RBP16.71■□□□□ 0.27
CSTF2-201ENST00000372972 NECTIN2Q92692 538 aa16.71■□□□□ 0.27
CSTF2-201ENST00000372972 CHMP4AQ9BY43 222 aa16.71■□□□□ 0.27
CSTF2-201ENST00000372972 CSB-PGBD3P0DP91 1061 aa16.71■□□□□ 0.27
CSTF2-201ENST00000372972 TEFQ10587 303 aa16.71■□□□□ 0.27
CSTF2-201ENST00000372972 C1orf141Q5JVX7 400 aa16.71■□□□□ 0.27
CSTF2-201ENST00000372972 MFAP1P55081 439 aaKnown RBP16.7■□□□□ 0.26
CSTF2-201ENST00000372972 EIF4A1P60842 406 aaKnown RBP16.7■□□□□ 0.26
CSTF2-201ENST00000372972 RTL5Q5HYW3 569 aaPredicted RBP16.7■□□□□ 0.26
CSTF2-201ENST00000372972 HDGFL1Q5TGJ6 251 aa16.7■□□□□ 0.26
CSTF2-201ENST00000372972 C22orf23Q9BZE7 217 aa16.7■□□□□ 0.26
CSTF2-201ENST00000372972 HOXB7P09629 217 aa16.69■□□□□ 0.26
CSTF2-201ENST00000372972 PRDM11Q9NQV5 511 aa16.69■□□□□ 0.26
CSTF2-201ENST00000372972 FAM208AQ9UK61 1670 aaKnown RBP16.69■□□□□ 0.26
CSTF2-201ENST00000372972 ABCA3Q99758 1704 aa16.69■□□□□ 0.26
CSTF2-201ENST00000372972 RNMTO43148 476 aaKnown RBP16.69■□□□□ 0.26
CSTF2-201ENST00000372972 HMMRO75330 724 aa16.69■□□□□ 0.26
CSTF2-201ENST00000372972 MPRIPQ6WCQ1 1025 aa16.69■□□□□ 0.26
CSTF2-201ENST00000372972 BTBD11A6QL63 1104 aa16.68■□□□□ 0.26
CSTF2-201ENST00000372972 GNAI2P04899 355 aa16.68■□□□□ 0.26
CSTF2-201ENST00000372972 USP35Q9P2H5 1018 aa16.68■□□□□ 0.26
CSTF2-201ENST00000372972 ROBO1Q9Y6N7 1651 aa16.68■□□□□ 0.26
CSTF2-201ENST00000372972 GNAI3P08754 354 aa16.68■□□□□ 0.26
CSTF2-201ENST00000372972 RAPGEF4Q8WZA2 1011 aa16.68■□□□□ 0.26
CSTF2-201ENST00000372972 PLEKHM2Q8IWE5 1019 aa16.67■□□□□ 0.26
CSTF2-201ENST00000372972 CACNA1FO60840 1977 aa16.67■□□□□ 0.26
CSTF2-201ENST00000372972 OVOS2A0A0G2JMS6 1433 aa16.66■□□□□ 0.26
CSTF2-201ENST00000372972 TATP17735 454 aaPredicted RBP16.66■□□□□ 0.26
CSTF2-201ENST00000372972 KCNQ3O43525 872 aa16.65■□□□□ 0.26
CSTF2-201ENST00000372972 EIF2S2P20042 333 aaKnown RBP16.65■□□□□ 0.26
CSTF2-201ENST00000372972 MEGF6O75095 1541 aa16.65■□□□□ 0.26
CSTF2-201ENST00000372972 PHAXQ9H814 394 aaKnown RBP16.64■□□□□ 0.25
CSTF2-201ENST00000372972 PXDNLA1KZ92 1463 aa16.64■□□□□ 0.25
CSTF2-201ENST00000372972 KDM3BQ7LBC6 1761 aa16.63■□□□□ 0.25
CSTF2-201ENST00000372972 C16orf71Q8IYS4 520 aaPredicted RBP16.63■□□□□ 0.25
CSTF2-201ENST00000372972 WDR17Q8IZU2 1322 aa16.63■□□□□ 0.25
CSTF2-201ENST00000372972 AHDC1Q5TGY3 1603 aaPredicted RBP16.62■□□□□ 0.25
CSTF2-201ENST00000372972 RBM25P49756 843 aaKnown RBP16.62■□□□□ 0.25
CSTF2-201ENST00000372972 COL5A2P05997 1499 aaPredicted RBP16.62■□□□□ 0.25
CSTF2-201ENST00000372972 ATP8B2P98198 1209 aa16.62■□□□□ 0.25
CSTF2-201ENST00000372972 TTC22Q5TAA0 569 aa16.62■□□□□ 0.25
CSTF2-201ENST00000372972 TBC1D9Q6ZT07 1266 aa16.62■□□□□ 0.25
CSTF2-201ENST00000372972 TBC1D2Q9BYX2 928 aa16.62■□□□□ 0.25
CSTF2-201ENST00000372972 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.62■□□□□ 0.25
CSTF2-201ENST00000372972 CHPF2Q9P2E5 772 aa16.62■□□□□ 0.25
CSTF2-201ENST00000372972 SPG7Q9UQ90 795 aa16.62■□□□□ 0.25
CSTF2-201ENST00000372972 EIF5BO60841 1220 aaKnown RBP16.61■□□□□ 0.25
CSTF2-201ENST00000372972 CDC45O75419 566 aa16.61■□□□□ 0.25
CSTF2-201ENST00000372972 GSPT1P15170 499 aaKnown RBP16.61■□□□□ 0.25
CSTF2-201ENST00000372972 USP44Q9H0E7 712 aa16.61■□□□□ 0.25
CSTF2-201ENST00000372972 APBB1O00213 710 aa16.6■□□□□ 0.25
CSTF2-201ENST00000372972 SMARCA5O60264 1052 aaPredicted RBP16.6■□□□□ 0.25
CSTF2-201ENST00000372972 TOM1L2Q6ZVM7 507 aa16.6■□□□□ 0.25
CSTF2-201ENST00000372972 NFKBIBQ15653 356 aa16.6■□□□□ 0.25
CSTF2-201ENST00000372972 SRCIN1Q9C0H9 1055 aa16.6■□□□□ 0.25
CSTF2-201ENST00000372972 DBF4Q9UBU7 674 aaPredicted RBP16.6■□□□□ 0.25
CSTF2-201ENST00000372972 ADAMTS7Q9UKP4 1686 aa16.59■□□□□ 0.25
CSTF2-201ENST00000372972 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
CSTF2-201ENST00000372972 UBTFL1P0CB47 393 aaPredicted RBP16.59■□□□□ 0.25
CSTF2-201ENST00000372972 PHKG2P15735 406 aa16.59■□□□□ 0.25
CSTF2-201ENST00000372972 BCL11AQ9H165 835 aa16.59■□□□□ 0.25
CSTF2-201ENST00000372972 PLEKHG2Q9H7P9 1386 aa16.59■□□□□ 0.25
CSTF2-201ENST00000372972 HEG1Q9ULI3 1381 aa16.59■□□□□ 0.25
CSTF2-201ENST00000372972 OTUD7AQ8TE49 926 aaPredicted RBP16.58■□□□□ 0.25
CSTF2-201ENST00000372972 LRRFIP2Q9Y608 721 aaKnown RBP16.58■□□□□ 0.25
CSTF2-201ENST00000372972 STRN4Q9NRL3 753 aa16.58■□□□□ 0.24
CSTF2-201ENST00000372972 PKD1L3Q7Z443 1732 aa16.58■□□□□ 0.24
CSTF2-201ENST00000372972 PNMA6EA0A0J9YXQ4 647 aa16.57■□□□□ 0.24
CSTF2-201ENST00000372972 EVA1CP58658 441 aa16.57■□□□□ 0.24
CSTF2-201ENST00000372972 IFNL2Q8IZJ0 200 aa16.57■□□□□ 0.24
CSTF2-201ENST00000372972 DNAAF4Q8WXU2 420 aa16.57■□□□□ 0.24
CSTF2-201ENST00000372972 SIPA1L3O60292 1781 aaPredicted RBP16.57■□□□□ 0.24
CSTF2-201ENST00000372972 N4BP2Q86UW6 1770 aaPredicted RBP16.57■□□□□ 0.24
CSTF2-201ENST00000372972 KDM6AO15550 1401 aaPredicted RBP16.57■□□□□ 0.24
CSTF2-201ENST00000372972 PI4KAP2A4QPH2 592 aa16.57■□□□□ 0.24
CSTF2-201ENST00000372972 CYP27B1O15528 508 aa16.57■□□□□ 0.24
CSTF2-201ENST00000372972 BEND3Q5T5X7 828 aa16.57■□□□□ 0.24
CSTF2-201ENST00000372972 LARP1Q6PKG0 1096 aaKnown RBP16.57■□□□□ 0.24
CSTF2-201ENST00000372972 PI4KAP1Q8N8J0 262 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms