RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 RPAP2Q8IXW5 612 aaPredicted RBP18.05■□□□□ 0.48
COL9A2-202ENST00000372748 MSH6P52701 1360 aa18.05■□□□□ 0.48
COL9A2-202ENST00000372748 TPRNQ4KMQ1 711 aa18.05■□□□□ 0.48
COL9A2-202ENST00000372748 C3P01024 1663 aa18.05■□□□□ 0.48
COL9A2-202ENST00000372748 CHL1O00533 1208 aa18.05■□□□□ 0.48
COL9A2-202ENST00000372748 PTMAP06454 111 aaKnown RBP18.05■□□□□ 0.48
COL9A2-202ENST00000372748 GDPD2Q9HCC8 539 aa18.05■□□□□ 0.48
COL9A2-202ENST00000372748 TNRQ92752 1358 aa18.04■□□□□ 0.48
COL9A2-202ENST00000372748 LTKP29376 864 aa18.04■□□□□ 0.48
COL9A2-202ENST00000372748 SIRT1Q96EB6 747 aa18.04■□□□□ 0.48
COL9A2-202ENST00000372748 CCDC39Q9UFE4 941 aa18.04■□□□□ 0.48
COL9A2-202ENST00000372748 RTL1A6NKG5 1358 aa18.03■□□□□ 0.48
COL9A2-202ENST00000372748 ITSN1Q15811 1721 aa18.03■□□□□ 0.48
COL9A2-202ENST00000372748 TMEM2Q9UHN6 1383 aa18.03■□□□□ 0.48
COL9A2-202ENST00000372748 SLC4A2P04920 1241 aa18.03■□□□□ 0.48
COL9A2-202ENST00000372748 TECPR2O15040 1411 aa18.02■□□□□ 0.48
COL9A2-202ENST00000372748 AKAP12Q02952 1782 aa18.02■□□□□ 0.48
COL9A2-202ENST00000372748 CSPP1Q1MSJ5 1256 aa18.02■□□□□ 0.48
COL9A2-202ENST00000372748 SLC4A10Q6U841 1118 aa18.02■□□□□ 0.48
COL9A2-202ENST00000372748 PALD1Q9ULE6 856 aa18.02■□□□□ 0.48
COL9A2-202ENST00000372748 MBD3O95983 291 aa18.01■□□□□ 0.47
COL9A2-202ENST00000372748 JARID2Q92833 1246 aaPredicted RBP18.01■□□□□ 0.47
COL9A2-202ENST00000372748 RGS12O14924 1447 aa18.01■□□□□ 0.47
COL9A2-202ENST00000372748 F6X3S4 739 aa18.01■□□□□ 0.47
COL9A2-202ENST00000372748 PDE1AP54750 535 aa18.01■□□□□ 0.47
COL9A2-202ENST00000372748 KIF24Q5T7B8 1368 aa18■□□□□ 0.47
COL9A2-202ENST00000372748 EXOC6BQ9Y2D4 811 aa18■□□□□ 0.47
COL9A2-202ENST00000372748 BRD1O95696 1058 aa18■□□□□ 0.47
COL9A2-202ENST00000372748 MCM5P33992 734 aa18■□□□□ 0.47
COL9A2-202ENST00000372748 G2E3Q7L622 706 aa18■□□□□ 0.47
COL9A2-202ENST00000372748 ZNF830Q96NB3 372 aaPredicted RBP18■□□□□ 0.47
COL9A2-202ENST00000372748 TSPY26PQ9H489 355 aa18■□□□□ 0.47
COL9A2-202ENST00000372748 ADAMTS13Q76LX8 1427 aa17.99■□□□□ 0.47
COL9A2-202ENST00000372748 GADD45BO75293 160 aaPredicted RBP17.99■□□□□ 0.47
COL9A2-202ENST00000372748 MTHFSDQ2M296 383 aaKnown RBP17.99■□□□□ 0.47
COL9A2-202ENST00000372748 MAP7D2Q96T17 732 aa17.99■□□□□ 0.47
COL9A2-202ENST00000372748 UPF3BQ9BZI7 483 aaKnown RBP17.99■□□□□ 0.47
COL9A2-202ENST00000372748 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.99■□□□□ 0.47
COL9A2-202ENST00000372748 MAP3K19Q56UN5 1328 aa17.99■□□□□ 0.47
COL9A2-202ENST00000372748 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.99■□□□□ 0.47
COL9A2-202ENST00000372748 DNTTIP2Q5QJE6 756 aaKnown RBP17.99■□□□□ 0.47
COL9A2-202ENST00000372748 SASS6Q6UVJ0 657 aa17.99■□□□□ 0.47
COL9A2-202ENST00000372748 PLEKHG3A1L390 1219 aa17.98■□□□□ 0.47
COL9A2-202ENST00000372748 ANO2Q9NQ90 1003 aa17.98■□□□□ 0.47
COL9A2-202ENST00000372748 OVOS2A0A0J9YW53 1432 aa17.98■□□□□ 0.47
COL9A2-202ENST00000372748 OVOS2Q6IE36 1432 aa17.98■□□□□ 0.47
COL9A2-202ENST00000372748 DYNC1I1O14576 645 aa17.98■□□□□ 0.47
COL9A2-202ENST00000372748 TSPYL4Q9UJ04 414 aa17.98■□□□□ 0.47
COL9A2-202ENST00000372748 USP6P35125 1406 aa17.97■□□□□ 0.47
COL9A2-202ENST00000372748 TSC1Q92574 1164 aa17.97■□□□□ 0.47
COL9A2-202ENST00000372748 RTF1Q92541 710 aaKnown RBP17.97■□□□□ 0.47
COL9A2-202ENST00000372748 RILPL2Q969X0 211 aa17.97■□□□□ 0.47
COL9A2-202ENST00000372748 NECTIN2Q92692 538 aa17.97■□□□□ 0.47
COL9A2-202ENST00000372748 PEAK1Q9H792 1746 aa17.96■□□□□ 0.47
COL9A2-202ENST00000372748 KIAA2012Q0VF49 1180 aa17.96■□□□□ 0.47
COL9A2-202ENST00000372748 NUTM2GQ5VZR2 741 aa17.96■□□□□ 0.47
COL9A2-202ENST00000372748 TRIM6-TRIM34B2RNG4 842 aa17.96■□□□□ 0.47
COL9A2-202ENST00000372748 HAP1P54257 671 aaPredicted RBP17.96■□□□□ 0.47
COL9A2-202ENST00000372748 NGDNQ8NEJ9 315 aaKnown RBP17.96■□□□□ 0.47
COL9A2-202ENST00000372748 ESYT1Q9BSJ8 1104 aa17.96■□□□□ 0.47
COL9A2-202ENST00000372748 PRDM10Q9NQV6 1147 aa17.96■□□□□ 0.47
COL9A2-202ENST00000372748 HMMRO75330 724 aa17.95■□□□□ 0.46
COL9A2-202ENST00000372748 AMOTL2Q9Y2J4 779 aa17.95■□□□□ 0.46
COL9A2-202ENST00000372748 AMPHP49418 695 aa17.95■□□□□ 0.46
COL9A2-202ENST00000372748 C17orf53Q8N3J3 647 aaPredicted RBP17.95■□□□□ 0.46
COL9A2-202ENST00000372748 PRDM4Q9UKN5 801 aa17.95■□□□□ 0.46
COL9A2-202ENST00000372748 NRKQ7Z2Y5 1582 aa17.95■□□□□ 0.46
COL9A2-202ENST00000372748 PTPRCP08575 1304 aa17.94■□□□□ 0.46
COL9A2-202ENST00000372748 CRB1P82279 1406 aa17.94■□□□□ 0.46
COL9A2-202ENST00000372748 USP25Q9UHP3 1055 aa17.94■□□□□ 0.46
COL9A2-202ENST00000372748 KIAA0232Q92628 1395 aa17.94■□□□□ 0.46
COL9A2-202ENST00000372748 USP48Q86UV5 1035 aa17.94■□□□□ 0.46
COL9A2-202ENST00000372748 PTPRUQ92729 1446 aa17.94■□□□□ 0.46
COL9A2-202ENST00000372748 CUL4AQ13619 759 aa17.93■□□□□ 0.46
COL9A2-202ENST00000372748 RIMS1Q86UR5 1692 aaKnown RBP17.93■□□□□ 0.46
COL9A2-202ENST00000372748 UBR1Q8IWV7 1749 aa17.93■□□□□ 0.46
COL9A2-202ENST00000372748 SYAP1Q96A49 352 aaPredicted RBP17.93■□□□□ 0.46
COL9A2-202ENST00000372748 EYA1Q99502 592 aa17.93■□□□□ 0.46
COL9A2-202ENST00000372748 OSBPL3Q9H4L5 887 aa17.93■□□□□ 0.46
COL9A2-202ENST00000372748 MCM2P49736 904 aa17.92■□□□□ 0.46
COL9A2-202ENST00000372748 TTC12Q9H892 705 aaPredicted RBP17.92■□□□□ 0.46
COL9A2-202ENST00000372748 FAM177BA6PVY3 158 aa17.92■□□□□ 0.46
COL9A2-202ENST00000372748 MCCP23508 829 aa17.92■□□□□ 0.46
COL9A2-202ENST00000372748 USP31Q70CQ4 1352 aa17.91■□□□□ 0.46
COL9A2-202ENST00000372748 UNC5CLQ8IV45 518 aa17.91■□□□□ 0.46
COL9A2-202ENST00000372748 MX1P20591 662 aa17.9■□□□□ 0.46
COL9A2-202ENST00000372748 CHMLP26374 656 aa17.9■□□□□ 0.46
COL9A2-202ENST00000372748 LTV1Q96GA3 475 aaPredicted RBP17.9■□□□□ 0.46
COL9A2-202ENST00000372748 LARP6Q9BRS8 491 aaKnown RBP17.9■□□□□ 0.46
COL9A2-202ENST00000372748 IL25Q9H293 177 aa17.9■□□□□ 0.46
COL9A2-202ENST00000372748 DTNBO60941 627 aa17.9■□□□□ 0.46
COL9A2-202ENST00000372748 EID1Q9Y6B2 187 aa17.9■□□□□ 0.46
COL9A2-202ENST00000372748 PLEKHG1Q9ULL1 1385 aa17.9■□□□□ 0.46
COL9A2-202ENST00000372748 PLCB2Q00722 1185 aa17.89■□□□□ 0.46
COL9A2-202ENST00000372748 INTS4Q96HW7 963 aaKnown RBP17.89■□□□□ 0.46
COL9A2-202ENST00000372748 PNMA6EA0A0J9YXQ4 647 aa17.89■□□□□ 0.45
COL9A2-202ENST00000372748 HCLS1P14317 486 aaPredicted RBP17.89■□□□□ 0.45
COL9A2-202ENST00000372748 NLRP6P59044 892 aa17.89■□□□□ 0.45
COL9A2-202ENST00000372748 MTERF4Q7Z6M4 381 aaKnown RBP17.89■□□□□ 0.45
COL9A2-202ENST00000372748 LRRCC1Q9C099 1032 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms