RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 CABP4P57796 275 aa30.48■■■□□ 2.47
COL9A2-201ENST00000372736 MTHFSDQ2M296 383 aaKnown RBP30.48■■■□□ 2.47
COL9A2-201ENST00000372736 HMGB2P26583 209 aaKnown RBP30.47■■■□□ 2.47
COL9A2-201ENST00000372736 ITPK1Q13572 414 aa30.45■■■□□ 2.47
COL9A2-201ENST00000372736 LINC00116Q8NCU8 138 aa30.45■■■□□ 2.47
COL9A2-201ENST00000372736 SLC16A10Q8TF71 515 aa30.45■■■□□ 2.47
COL9A2-201ENST00000372736 COL5A3P25940 1745 aaPredicted RBP30.44■■■□□ 2.46
COL9A2-201ENST00000372736 COL23A1Q86Y22 540 aaPredicted RBP30.42■■■□□ 2.46
COL9A2-201ENST00000372736 NFATC2IPQ8NCF5 419 aa30.42■■■□□ 2.46
COL9A2-201ENST00000372736 SLC4A9Q96Q91 983 aa30.42■■■□□ 2.46
COL9A2-201ENST00000372736 LGR6Q9HBX8 967 aa30.42■■■□□ 2.46
COL9A2-201ENST00000372736 CICQ96RK0 1608 aaPredicted RBP30.41■■■□□ 2.46
COL9A2-201ENST00000372736 ATP6V1AP38606 617 aa30.41■■■□□ 2.46
COL9A2-201ENST00000372736 AMIGO3Q86WK7 504 aa30.41■■■□□ 2.46
COL9A2-201ENST00000372736 RSPH6AQ9H0K4 717 aa30.41■■■□□ 2.46
COL9A2-201ENST00000372736 RNMTO43148 476 aaKnown RBP30.4■■■□□ 2.46
COL9A2-201ENST00000372736 DDX10Q13206 875 aaKnown RBP30.4■■■□□ 2.46
COL9A2-201ENST00000372736 AK7Q96M32 723 aa30.4■■■□□ 2.46
COL9A2-201ENST00000372736 NUDCQ9Y266 331 aa30.4■■■□□ 2.46
COL9A2-201ENST00000372736 SLC52A2Q9HAB3 445 aa30.39■■■□□ 2.46
COL9A2-201ENST00000372736 PRKAR2BP31323 418 aa30.38■■■□□ 2.45
COL9A2-201ENST00000372736 TJP1Q07157 1748 aa30.38■■■□□ 2.45
COL9A2-201ENST00000372736 MAP3K5Q99683 1374 aa30.38■■■□□ 2.45
COL9A2-201ENST00000372736 RBM42Q9BTD8 480 aaKnown RBP30.37■■■□□ 2.45
COL9A2-201ENST00000372736 U2AF1L5P0DN76 240 aaPredicted RBP30.36■■■□□ 2.45
COL9A2-201ENST00000372736 U2AF1Q01081 240 aaKnown RBP eCLIP30.36■■■□□ 2.45
COL9A2-201ENST00000372736 GAS2L2Q8NHY3 880 aa30.36■■■□□ 2.45
COL9A2-201ENST00000372736 MSH5O43196 834 aa30.35■■■□□ 2.45
COL9A2-201ENST00000372736 ZEB1P37275 1124 aaPredicted RBP30.35■■■□□ 2.45
COL9A2-201ENST00000372736 FLAD1Q8NFF5 587 aa30.35■■■□□ 2.45
COL9A2-201ENST00000372736 PHACTR3Q96KR7 559 aa30.35■■■□□ 2.45
COL9A2-201ENST00000372736 SIPA1L3O60292 1781 aaPredicted RBP30.34■■■□□ 2.45
COL9A2-201ENST00000372736 ARXQ96QS3 562 aa30.34■■■□□ 2.45
COL9A2-201ENST00000372736 SMIM5Q71RC9 77 aa30.33■■■□□ 2.45
COL9A2-201ENST00000372736 PTCD1O75127 700 aaKnown RBP30.32■■■□□ 2.44
COL9A2-201ENST00000372736 SSFA2P28290 1259 aa30.32■■■□□ 2.44
COL9A2-201ENST00000372736 FHDC1Q9C0D6 1143 aaPredicted RBP30.32■■■□□ 2.44
COL9A2-201ENST00000372736 UBR2Q8IWV8 1755 aa30.32■■■□□ 2.44
COL9A2-201ENST00000372736 MYH14Q7Z406 1995 aaKnown RBP30.32■■■□□ 2.44
COL9A2-201ENST00000372736 KCPQ6ZWJ8 1503 aa30.32■■■□□ 2.44
COL9A2-201ENST00000372736 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.31■■■□□ 2.44
COL9A2-201ENST00000372736 GNPATO15228 680 aa30.31■■■□□ 2.44
COL9A2-201ENST00000372736 FCHSD2O94868 740 aa30.31■■■□□ 2.44
COL9A2-201ENST00000372736 PHF14O94880 888 aa30.31■■■□□ 2.44
COL9A2-201ENST00000372736 RALBP1Q15311 655 aa30.31■■■□□ 2.44
COL9A2-201ENST00000372736 GNAT3A8MTJ3 354 aa30.3■■■□□ 2.44
COL9A2-201ENST00000372736 POLD1P28340 1107 aa30.3■■■□□ 2.44
COL9A2-201ENST00000372736 CNTNAP4Q9C0A0 1308 aa30.29■■■□□ 2.44
COL9A2-201ENST00000372736 MSL1Q68DK7 614 aa30.28■■■□□ 2.44
COL9A2-201ENST00000372736 IL17REQ8NFR9 667 aa30.28■■■□□ 2.44
COL9A2-201ENST00000372736 SLC39A6Q13433 755 aa30.27■■■□□ 2.44
COL9A2-201ENST00000372736 SYT17Q9BSW7 474 aa30.27■■■□□ 2.44
COL9A2-201ENST00000372736 CEMIPQ8WUJ3 1361 aa30.27■■■□□ 2.44
COL9A2-201ENST00000372736 RC3H1Q5TC82 1133 aaKnown RBP30.26■■■□□ 2.43
COL9A2-201ENST00000372736 C4AP0C0L4 1744 aa30.25■■■□□ 2.43
COL9A2-201ENST00000372736 RTCBQ9Y3I0 505 aaKnown RBP30.22■■■□□ 2.43
COL9A2-201ENST00000372736 TEFQ10587 303 aa30.21■■■□□ 2.43
COL9A2-201ENST00000372736 MYBBP1AQ9BQG0 1328 aaKnown RBP30.21■■■□□ 2.43
COL9A2-201ENST00000372736 CRKLP46109 303 aaKnown RBP30.2■■■□□ 2.43
COL9A2-201ENST00000372736 DLG5Q8TDM6 1919 aa30.2■■■□□ 2.42
COL9A2-201ENST00000372736 RPS6KA4O75676 772 aa30.19■■■□□ 2.42
COL9A2-201ENST00000372736 DNAJC10Q8IXB1 793 aa30.19■■■□□ 2.42
COL9A2-201ENST00000372736 ADRA2BP18089 450 aa30.18■■■□□ 2.42
COL9A2-201ENST00000372736 TRAPPC3LQ5T215 181 aa30.17■■■□□ 2.42
COL9A2-201ENST00000372736 PLEKHF1Q96S99 279 aa30.17■■■□□ 2.42
COL9A2-201ENST00000372736 KLHL34Q8N239 644 aa30.16■■■□□ 2.42
COL9A2-201ENST00000372736 INTS5Q6P9B9 1019 aaKnown RBP30.14■■■□□ 2.42
COL9A2-201ENST00000372736 ZNF790Q6PG37 636 aa30.14■■■□□ 2.42
COL9A2-201ENST00000372736 MCM10Q7L590 875 aa30.14■■■□□ 2.42
COL9A2-201ENST00000372736 TTC5Q8N0Z6 440 aa30.14■■■□□ 2.42
COL9A2-201ENST00000372736 VSIG10Q8N0Z9 540 aa30.14■■■□□ 2.42
COL9A2-201ENST00000372736 ARHGEF1Q92888 912 aaKnown RBP30.14■■■□□ 2.42
COL9A2-201ENST00000372736 CYP19A1P11511 503 aaPredicted RBP30.12■■■□□ 2.41
COL9A2-201ENST00000372736 RTF1Q92541 710 aaKnown RBP30.12■■■□□ 2.41
COL9A2-201ENST00000372736 ZNF496Q96IT1 587 aaPredicted RBP30.12■■■□□ 2.41
COL9A2-201ENST00000372736 CCDC87Q9NVE4 849 aa30.12■■■□□ 2.41
COL9A2-201ENST00000372736 HTATSF1O43719 755 aaKnown RBP30.11■■■□□ 2.41
COL9A2-201ENST00000372736 NLGN2Q8NFZ4 835 aa30.11■■■□□ 2.41
COL9A2-201ENST00000372736 PRKRIP1Q9H875 184 aaPredicted RBP30.11■■■□□ 2.41
COL9A2-201ENST00000372736 DCTN1Q14203 1278 aa30.1■■■□□ 2.41
COL9A2-201ENST00000372736 HEG1Q9ULI3 1381 aa30.1■■■□□ 2.41
COL9A2-201ENST00000372736 DCAF8L1A6NGE4 600 aa30.09■■■□□ 2.41
COL9A2-201ENST00000372736 NEFMP07197 916 aa30.09■■■□□ 2.41
COL9A2-201ENST00000372736 RFC4P35249 363 aa30.09■■■□□ 2.41
COL9A2-201ENST00000372736 SOS1Q07889 1333 aaPredicted RBP30.08■■■□□ 2.41
COL9A2-201ENST00000372736 BTBD11A6QL63 1104 aa30.08■■■□□ 2.41
COL9A2-201ENST00000372736 KCNQ3O43525 872 aa30.07■■■□□ 2.4
COL9A2-201ENST00000372736 GYS1P13807 737 aa30.07■■■□□ 2.4
COL9A2-201ENST00000372736 MAPK8IP3Q9UPT6 1336 aa30.06■■■□□ 2.4
COL9A2-201ENST00000372736 NFE2L2Q16236 605 aa30.06■■■□□ 2.4
COL9A2-201ENST00000372736 PNNQ9H307 717 aaKnown RBP30.06■■■□□ 2.4
COL9A2-201ENST00000372736 ZBTB1Q9Y2K1 713 aa30.06■■■□□ 2.4
COL9A2-201ENST00000372736 USP42Q9H9J4 1324 aaKnown RBP30.05■■■□□ 2.4
COL9A2-201ENST00000372736 MMP10P09238 476 aa30.05■■■□□ 2.4
COL9A2-201ENST00000372736 FMNL2Q96PY5 1086 aa30.05■■■□□ 2.4
COL9A2-201ENST00000372736 CD2APQ9Y5K6 639 aa30.05■■■□□ 2.4
COL9A2-201ENST00000372736 NLGN1Q8N2Q7 840 aa30.04■■■□□ 2.4
COL9A2-201ENST00000372736 SRP68Q9UHB9 627 aaKnown RBP30.04■■■□□ 2.4
COL9A2-201ENST00000372736 COL15A1P39059 1388 aa30.03■■■□□ 2.4
COL9A2-201ENST00000372736 KIF13BQ9NQT8 1826 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms