RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 FAM69CQ0P6D2 419 aa14.49□□□□□ -0.09
SNX21-205ENST00000372547 PIBF1Q8WXW3 757 aa14.49□□□□□ -0.09
SNX21-205ENST00000372547 BCL11BQ9C0K0 894 aaPredicted RBP14.49□□□□□ -0.09
SNX21-205ENST00000372547 NCKAP5LQ9HCH0 1330 aa14.48□□□□□ -0.09
SNX21-205ENST00000372547 SULT6B1Q6IMI4 303 aa14.48□□□□□ -0.09
SNX21-205ENST00000372547 MCM2P49736 904 aa14.48□□□□□ -0.09
SNX21-205ENST00000372547 G2E3Q7L622 706 aa14.48□□□□□ -0.09
SNX21-205ENST00000372547 KIF3AQ9Y496 699 aa14.48□□□□□ -0.09
SNX21-205ENST00000372547 HECW2Q9P2P5 1572 aa14.48□□□□□ -0.09
SNX21-205ENST00000372547 ABCC3O15438 1527 aa14.47□□□□□ -0.09
SNX21-205ENST00000372547 IGSF3O75054 1194 aa14.47□□□□□ -0.09
SNX21-205ENST00000372547 SRCIN1Q9C0H9 1055 aa14.47□□□□□ -0.09
SNX21-205ENST00000372547 CHMP3Q9Y3E7 222 aa14.47□□□□□ -0.09
SNX21-205ENST00000372547 REREQ9P2R6 1566 aa14.47□□□□□ -0.09
SNX21-205ENST00000372547 GIMAP6Q6P9H5 292 aa14.47□□□□□ -0.09
SNX21-205ENST00000372547 ARHGEF40Q8TER5 1519 aa14.46□□□□□ -0.09
SNX21-205ENST00000372547 WDR33Q9C0J8 1336 aaKnown RBP14.46□□□□□ -0.09
SNX21-205ENST00000372547 MX1P20591 662 aa14.46□□□□□ -0.09
SNX21-205ENST00000372547 CUL4AQ13619 759 aa14.46□□□□□ -0.09
SNX21-205ENST00000372547 UNC5CLQ8IV45 518 aa14.46□□□□□ -0.09
SNX21-205ENST00000372547 COG3Q96JB2 828 aa14.46□□□□□ -0.09
SNX21-205ENST00000372547 IL1RAPL2Q9NP60 686 aa14.46□□□□□ -0.09
SNX21-205ENST00000372547 LMTK2Q8IWU2 1503 aa14.46□□□□□ -0.1
SNX21-205ENST00000372547 HMGN5P82970 282 aaKnown RBP14.45□□□□□ -0.1
SNX21-205ENST00000372547 ATP2B3Q16720 1220 aa14.45□□□□□ -0.1
SNX21-205ENST00000372547 PRIMPOLQ96LW4 560 aa14.45□□□□□ -0.1
SNX21-205ENST00000372547 NEXMIFQ5QGS0 1516 aa14.45□□□□□ -0.1
SNX21-205ENST00000372547 MAP2P11137 1827 aaKnown RBP14.45□□□□□ -0.1
SNX21-205ENST00000372547 PLEKHG5O94827 1062 aa14.45□□□□□ -0.1
SNX21-205ENST00000372547 CHMLP26374 656 aa14.45□□□□□ -0.1
SNX21-205ENST00000372547 CCDC183Q5T5S1 534 aa14.45□□□□□ -0.1
SNX21-205ENST00000372547 LRRCC1Q9C099 1032 aa14.45□□□□□ -0.1
SNX21-205ENST00000372547 ZSCAN20P17040 1043 aaPredicted RBP14.45□□□□□ -0.1
SNX21-205ENST00000372547 IL25Q9H293 177 aa14.44□□□□□ -0.1
SNX21-205ENST00000372547 BCL2L12Q9HB09 334 aa14.44□□□□□ -0.1
SNX21-205ENST00000372547 PTPRMP28827 1452 aa14.44□□□□□ -0.1
SNX21-205ENST00000372547 TCHHQ07283 1943 aa14.44□□□□□ -0.1
SNX21-205ENST00000372547 DMTNQ08495 405 aa14.44□□□□□ -0.1
SNX21-205ENST00000372547 FAM184AQ8NB25 1140 aa14.44□□□□□ -0.1
SNX21-205ENST00000372547 INTS4Q96HW7 963 aaKnown RBP14.44□□□□□ -0.1
SNX21-205ENST00000372547 KIF24Q5T7B8 1368 aa14.43□□□□□ -0.1
SNX21-205ENST00000372547 SIGLEC1Q9BZZ2 1709 aa14.43□□□□□ -0.1
SNX21-205ENST00000372547 PNMA6EA0A0J9YXQ4 647 aa14.43□□□□□ -0.1
SNX21-205ENST00000372547 GNAI2P04899 355 aa14.43□□□□□ -0.1
SNX21-205ENST00000372547 CPA1P15085 419 aa14.43□□□□□ -0.1
SNX21-205ENST00000372547 NUTM1Q86Y26 1132 aa14.43□□□□□ -0.1
SNX21-205ENST00000372547 RGS12O14924 1447 aa14.43□□□□□ -0.1
SNX21-205ENST00000372547 ANKRD26Q9UPS8 1709 aa14.42□□□□□ -0.1
SNX21-205ENST00000372547 CHAF1AQ13111 956 aaPredicted RBP14.42□□□□□ -0.1
SNX21-205ENST00000372547 PDCL2Q8N4E4 241 aa14.42□□□□□ -0.1
SNX21-205ENST00000372547 PYCARDQ9ULZ3 195 aa14.42□□□□□ -0.1
SNX21-205ENST00000372547 KDM4AO75164 1064 aa14.42□□□□□ -0.1
SNX21-205ENST00000372547 HAP1P54257 671 aaPredicted RBP14.42□□□□□ -0.1
SNX21-205ENST00000372547 PTPRCP08575 1304 aa14.42□□□□□ -0.1
SNX21-205ENST00000372547 NUTM2FA1L443 756 aa14.41□□□□□ -0.1
SNX21-205ENST00000372547 U2AF2P26368 475 aaKnown RBP eCLIP14.41□□□□□ -0.1
SNX21-205ENST00000372547 UVSSAQ2YD98 709 aa14.41□□□□□ -0.1
SNX21-205ENST00000372547 OSBPL3Q9H4L5 887 aa14.41□□□□□ -0.1
SNX21-205ENST00000372547 RIOK3O14730 519 aaKnown RBP14.41□□□□□ -0.1
SNX21-205ENST00000372547 FOXO3O43524 673 aa14.41□□□□□ -0.1
SNX21-205ENST00000372547 DDX54Q8TDD1 881 aaKnown RBP14.41□□□□□ -0.1
SNX21-205ENST00000372547 TSPYL4Q9UJ04 414 aa14.41□□□□□ -0.1
SNX21-205ENST00000372547 DLG5Q8TDM6 1919 aa14.41□□□□□ -0.1
SNX21-205ENST00000372547 CHL1O00533 1208 aa14.4□□□□□ -0.1
SNX21-205ENST00000372547 FKBP5Q13451 457 aaPredicted RBP14.4□□□□□ -0.1
SNX21-205ENST00000372547 AP5Z1O43299 807 aa14.4□□□□□ -0.1
SNX21-205ENST00000372547 ZSCAN22P10073 491 aaPredicted RBP14.4□□□□□ -0.1
SNX21-205ENST00000372547 SMC3Q9UQE7 1217 aa14.4□□□□□ -0.1
SNX21-205ENST00000372547 KIF20BQ96Q89 1820 aa14.4□□□□□ -0.1
SNX21-205ENST00000372547 STX6O43752 255 aa14.39□□□□□ -0.11
SNX21-205ENST00000372547 SYT1P21579 422 aa14.39□□□□□ -0.11
SNX21-205ENST00000372547 DIP2CQ9Y2E4 1556 aa14.39□□□□□ -0.11
SNX21-205ENST00000372547 VPS37CA5D8V6 355 aaPredicted RBP14.39□□□□□ -0.11
SNX21-205ENST00000372547 ANAPC15P60006 121 aa14.39□□□□□ -0.11
SNX21-205ENST00000372547 DNM1Q05193 864 aaKnown RBP14.39□□□□□ -0.11
SNX21-205ENST00000372547 CAMK4Q16566 473 aa14.39□□□□□ -0.11
SNX21-205ENST00000372547 AK2P54819 239 aa14.39□□□□□ -0.11
SNX21-205ENST00000372547 UBE2HP62256 183 aa14.39□□□□□ -0.11
SNX21-205ENST00000372547 EIF4A2Q14240 407 aaKnown RBP14.39□□□□□ -0.11
SNX21-205ENST00000372547 DRC7Q8IY82 874 aa14.39□□□□□ -0.11
SNX21-205ENST00000372547 SLC52A1Q9NWF4 448 aa14.39□□□□□ -0.11
SNX21-205ENST00000372547 CDC42BPGQ6DT37 1551 aa14.38□□□□□ -0.11
SNX21-205ENST00000372547 NEO1Q92859 1461 aa14.38□□□□□ -0.11
SNX21-205ENST00000372547 CCT4P50991 539 aaKnown RBP14.38□□□□□ -0.11
SNX21-205ENST00000372547 KCNF1Q9H3M0 494 aa14.38□□□□□ -0.11
SNX21-205ENST00000372547 LRRFIP2Q9Y608 721 aaKnown RBP14.38□□□□□ -0.11
SNX21-205ENST00000372547 RPAP1Q9BWH6 1393 aaPredicted RBP14.38□□□□□ -0.11
SNX21-205ENST00000372547 CCDC83Q8IWF9 413 aa14.38□□□□□ -0.11
SNX21-205ENST00000372547 STK31Q9BXU1 1019 aa14.38□□□□□ -0.11
SNX21-205ENST00000372547 SPG7Q9UQ90 795 aa14.38□□□□□ -0.11
SNX21-205ENST00000372547 RTF1Q92541 710 aaKnown RBP14.37□□□□□ -0.11
SNX21-205ENST00000372547 CWC27Q6UX04 472 aaKnown RBP14.37□□□□□ -0.11
SNX21-205ENST00000372547 TXNDC2Q86VQ3 553 aa14.37□□□□□ -0.11
SNX21-205ENST00000372547 DIAPH3Q9NSV4 1193 aa14.37□□□□□ -0.11
SNX21-205ENST00000372547 LETM1O95202 739 aaPredicted RBP14.36□□□□□ -0.11
SNX21-205ENST00000372547 F13A1P00488 732 aa14.36□□□□□ -0.11
SNX21-205ENST00000372547 PTGS1P23219 599 aa14.36□□□□□ -0.11
SNX21-205ENST00000372547 GTF2F1P35269 517 aaKnown RBP eCLIP14.36□□□□□ -0.11
SNX21-205ENST00000372547 HSP90AB2PQ58FF8 381 aa14.36□□□□□ -0.11
SNX21-205ENST00000372547 UTP14CQ5TAP6 766 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms