RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 ANKRD24Q8TF21 1146 aa11.57□□□□□ -0.56
COL4A6-202ENST00000372216 CHRNA2Q15822 529 aa11.57□□□□□ -0.56
COL4A6-202ENST00000372216 CTNNA3Q9UI47 895 aa11.57□□□□□ -0.56
COL4A6-202ENST00000372216 CALRP27797 417 aaKnown RBP11.56□□□□□ -0.56
COL4A6-202ENST00000372216 FAM13BQ9NYF5 915 aa11.56□□□□□ -0.56
COL4A6-202ENST00000372216 PLCH2O75038 1416 aa11.56□□□□□ -0.56
COL4A6-202ENST00000372216 ENOX2Q16206 610 aaKnown RBP11.56□□□□□ -0.56
COL4A6-202ENST00000372216 HSP90AB3PQ58FF7 597 aa11.56□□□□□ -0.56
COL4A6-202ENST00000372216 GPATCH8Q9UKJ3 1502 aaKnown RBP11.56□□□□□ -0.56
COL4A6-202ENST00000372216 KINO60870 393 aaKnown RBP11.56□□□□□ -0.56
COL4A6-202ENST00000372216 RPAP2Q8IXW5 612 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-202ENST00000372216 WDR7Q9Y4E6 1490 aa11.56□□□□□ -0.56
COL4A6-202ENST00000372216 TTC21BQ7Z4L5 1316 aa11.56□□□□□ -0.56
COL4A6-202ENST00000372216 PDRG1Q9NUG6 133 aa11.56□□□□□ -0.56
COL4A6-202ENST00000372216 MPNDQ8N594 471 aa11.55□□□□□ -0.56
COL4A6-202ENST00000372216 SYCP2Q9BX26 1530 aa11.55□□□□□ -0.56
COL4A6-202ENST00000372216 DUOX2Q9NRD8 1548 aa11.55□□□□□ -0.56
COL4A6-202ENST00000372216 IFIT1P09914 478 aaKnown RBP11.55□□□□□ -0.56
COL4A6-202ENST00000372216 SEPT7Q16181 437 aaKnown RBP11.55□□□□□ -0.56
COL4A6-202ENST00000372216 EXOC6BQ9Y2D4 811 aa11.55□□□□□ -0.56
COL4A6-202ENST00000372216 FANCIQ9NVI1 1328 aa11.55□□□□□ -0.56
COL4A6-202ENST00000372216 ATP10BO94823 1461 aa11.55□□□□□ -0.56
COL4A6-202ENST00000372216 UBAP1LF5GYI3 381 aa11.55□□□□□ -0.56
COL4A6-202ENST00000372216 IFIT5Q13325 482 aaKnown RBP11.55□□□□□ -0.56
COL4A6-202ENST00000372216 IFNL2Q8IZJ0 200 aa11.55□□□□□ -0.56
COL4A6-202ENST00000372216 JAKMIP1Q96N16 626 aaKnown RBP11.55□□□□□ -0.56
COL4A6-202ENST00000372216 HYPKQ9NX55 129 aa11.55□□□□□ -0.56
COL4A6-202ENST00000372216 CTTNBP2Q8WZ74 1663 aa11.54□□□□□ -0.56
COL4A6-202ENST00000372216 RDXP35241 583 aaKnown RBP11.54□□□□□ -0.56
COL4A6-202ENST00000372216 AEBP1Q8IUX7 1158 aa11.54□□□□□ -0.56
COL4A6-202ENST00000372216 GPTP24298 496 aa11.54□□□□□ -0.56
COL4A6-202ENST00000372216 SPC24Q8NBT2 197 aa11.54□□□□□ -0.56
COL4A6-202ENST00000372216 CENPHQ9H3R5 247 aa11.54□□□□□ -0.56
COL4A6-202ENST00000372216 A2MP01023 1474 aa11.54□□□□□ -0.56
COL4A6-202ENST00000372216 FIBPO43427 364 aa11.54□□□□□ -0.56
COL4A6-202ENST00000372216 RAB11FIP3O75154 756 aa11.54□□□□□ -0.56
COL4A6-202ENST00000372216 LETM1O95202 739 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-202ENST00000372216 POLR3DP05423 398 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-202ENST00000372216 FAM177A1Q8N128 213 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-202ENST00000372216 IMMTQ16891 758 aaKnown RBP11.54□□□□□ -0.56
COL4A6-202ENST00000372216 BLOC1S2Q6QNY1 142 aa11.54□□□□□ -0.56
COL4A6-202ENST00000372216 ABCC11Q96J66 1382 aa11.54□□□□□ -0.56
COL4A6-202ENST00000372216 SMARCA5O60264 1052 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-202ENST00000372216 UHRF1BP1LA0JNW5 1464 aa11.54□□□□□ -0.56
COL4A6-202ENST00000372216 CDKL5O76039 1030 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 SLC5A1P13866 664 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 NOL7Q9UMY1 257 aaKnown RBP11.53□□□□□ -0.56
COL4A6-202ENST00000372216 ZNF518AQ6AHZ1 1483 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 ANKRD18BA2A2Z9 1011 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 PRPF40AO75400 957 aaKnown RBP11.53□□□□□ -0.56
COL4A6-202ENST00000372216 DZIP1Q86YF9 867 aaKnown RBP11.53□□□□□ -0.56
COL4A6-202ENST00000372216 KIF1BPQ96EK5 621 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 ZBTB3Q9H5J0 574 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 F6X3S4 739 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 HSP90AA2PQ14568 343 aaPredicted RBP11.53□□□□□ -0.56
COL4A6-202ENST00000372216 TAX1BP1Q86VP1 789 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 CRACR2BQ8N4Y2 399 aaPredicted RBP11.53□□□□□ -0.56
COL4A6-202ENST00000372216 RIMS2Q9UQ26 1411 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 ALDH1L2Q3SY69 923 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 NSD2O96028 1365 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 TOM1O60784 492 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 CDR1P51861 262 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 TEX35Q5T0J7 233 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 JMYQ8N9B5 988 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 DNAAF4Q8WXU2 420 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 DEF6Q9H4E7 631 aa11.53□□□□□ -0.56
COL4A6-202ENST00000372216 FAM193AP78312 1265 aa11.52□□□□□ -0.56
COL4A6-202ENST00000372216 DISP3Q9P2K9 1392 aa11.52□□□□□ -0.56
COL4A6-202ENST00000372216 DHX8Q14562 1220 aaKnown RBP11.52□□□□□ -0.57
COL4A6-202ENST00000372216 CAVIN1Q6NZI2 390 aaKnown RBP11.52□□□□□ -0.57
COL4A6-202ENST00000372216 FILIP1LQ4L180 1135 aa11.51□□□□□ -0.57
COL4A6-202ENST00000372216 MAP3K2Q9Y2U5 619 aa11.51□□□□□ -0.57
COL4A6-202ENST00000372216 TEX13AQ9BXU3 409 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-202ENST00000372216 DBF4Q9UBU7 674 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-202ENST00000372216 MINDY4BA8MYZ0 360 aa11.51□□□□□ -0.57
COL4A6-202ENST00000372216 C11orf95C9JLR9 678 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-202ENST00000372216 KRT32Q14532 448 aa11.51□□□□□ -0.57
COL4A6-202ENST00000372216 BOLA2Q9H3K6 86 aa11.51□□□□□ -0.57
COL4A6-202ENST00000372216 MX1P20591 662 aa11.51□□□□□ -0.57
COL4A6-202ENST00000372216 RFC4P35249 363 aa11.51□□□□□ -0.57
COL4A6-202ENST00000372216 SSH1Q8WYL5 1049 aa11.51□□□□□ -0.57
COL4A6-202ENST00000372216 VTI1AQ96AJ9 217 aa11.51□□□□□ -0.57
COL4A6-202ENST00000372216 PPIP5K1Q6PFW1 1433 aa11.51□□□□□ -0.57
COL4A6-202ENST00000372216 ME1P48163 572 aa11.51□□□□□ -0.57
COL4A6-202ENST00000372216 LARP1BQ659C4 914 aaKnown RBP11.51□□□□□ -0.57
COL4A6-202ENST00000372216 ZNF287Q9HBT7 754 aa11.51□□□□□ -0.57
COL4A6-202ENST00000372216 ACSBG1Q96GR2 724 aa11.5□□□□□ -0.57
COL4A6-202ENST00000372216 C8orf37Q96NL8 207 aa11.5□□□□□ -0.57
COL4A6-202ENST00000372216 TSPY26PQ9H489 355 aa11.5□□□□□ -0.57
COL4A6-202ENST00000372216 CLEC11AQ9Y240 323 aa11.5□□□□□ -0.57
COL4A6-202ENST00000372216 LRRFIP2Q9Y608 721 aaKnown RBP11.5□□□□□ -0.57
COL4A6-202ENST00000372216 A0A087WZG4 1122 aa11.5□□□□□ -0.57
COL4A6-202ENST00000372216 K7ELQ4 463 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-202ENST00000372216 MKNK2Q9HBH9 465 aa11.5□□□□□ -0.57
COL4A6-202ENST00000372216 ADAMTS12P58397 1594 aa11.5□□□□□ -0.57
COL4A6-202ENST00000372216 NCKAP5LQ9HCH0 1330 aa11.5□□□□□ -0.57
COL4A6-202ENST00000372216 CASTP20810 708 aaKnown RBP11.5□□□□□ -0.57
COL4A6-202ENST00000372216 NKTRP30414 1462 aaKnown RBP11.5□□□□□ -0.57
COL4A6-202ENST00000372216 KIF21AQ7Z4S6 1674 aa11.5□□□□□ -0.57
COL4A6-202ENST00000372216 UBA5Q9GZZ9 404 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms