RNA–Protein interactions for RNA: ENST00000371804.3

IFIT1-201, Transcript of interferon induced protein with tetratricopeptide repeats 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFIT1, Length 1,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFIT1-201ENST00000371804 KIF16BQ96L93 1317 aa7.12□□□□□ -1.27
IFIT1-201ENST00000371804 USP32Q8NFA0 1604 aa7.12□□□□□ -1.27
IFIT1-201ENST00000371804 IPO8O15397 1037 aaKnown RBP7.11□□□□□ -1.27
IFIT1-201ENST00000371804 FOXO3O43524 673 aa7.11□□□□□ -1.27
IFIT1-201ENST00000371804 KIF1CO43896 1103 aaKnown RBP7.11□□□□□ -1.27
IFIT1-201ENST00000371804 MSL3Q8N5Y2 521 aaKnown RBP7.11□□□□□ -1.27
IFIT1-201ENST00000371804 FAM210AQ96ND0 272 aa7.11□□□□□ -1.27
IFIT1-201ENST00000371804 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.11□□□□□ -1.27
IFIT1-201ENST00000371804 PSDA5PKW4 1024 aaPredicted RBP7.11□□□□□ -1.27
IFIT1-201ENST00000371804 ANP32CO43423 234 aa7.11□□□□□ -1.27
IFIT1-201ENST00000371804 OFD1O75665 1012 aa7.11□□□□□ -1.27
IFIT1-201ENST00000371804 ZRSR2Q15696 482 aaKnown RBP7.11□□□□□ -1.27
IFIT1-201ENST00000371804 SEPT12Q8IYM1 358 aa7.11□□□□□ -1.27
IFIT1-201ENST00000371804 MNS1Q8NEH6 495 aa7.11□□□□□ -1.27
IFIT1-201ENST00000371804 PPLO60437 1756 aa7.1□□□□□ -1.27
IFIT1-201ENST00000371804 PLCH1Q4KWH8 1693 aa7.1□□□□□ -1.27
IFIT1-201ENST00000371804 LRPPRCP42704 1394 aaKnown RBP7.1□□□□□ -1.27
IFIT1-201ENST00000371804 GOLGA6CA6NDK9 693 aa7.1□□□□□ -1.27
IFIT1-201ENST00000371804 GOLGA6BA6NDN3 693 aa7.1□□□□□ -1.27
IFIT1-201ENST00000371804 GOLGA6DP0CG33 693 aa7.1□□□□□ -1.27
IFIT1-201ENST00000371804 B4GALNT3Q6L9W6 998 aa7.1□□□□□ -1.27
IFIT1-201ENST00000371804 NOL8Q76FK4 1167 aaKnown RBP7.1□□□□□ -1.27
IFIT1-201ENST00000371804 GOLGA6AQ9NYA3 693 aa7.1□□□□□ -1.27
IFIT1-201ENST00000371804 FEZ2Q9UHY8 353 aaPredicted RBP7.1□□□□□ -1.27
IFIT1-201ENST00000371804 NWD2Q9ULI1 1742 aa7.1□□□□□ -1.27
IFIT1-201ENST00000371804 NAIPQ13075 1403 aa7.09□□□□□ -1.27
IFIT1-201ENST00000371804 SPATA31A3Q5VYP0 1347 aa7.09□□□□□ -1.27
IFIT1-201ENST00000371804 UQCRHLA0A096LP55 91 aa7.09□□□□□ -1.27
IFIT1-201ENST00000371804 UQCRHP07919 91 aa7.09□□□□□ -1.27
IFIT1-201ENST00000371804 SCP2P22307 547 aa7.09□□□□□ -1.27
IFIT1-201ENST00000371804 MFAP1P55081 439 aaKnown RBP7.09□□□□□ -1.27
IFIT1-201ENST00000371804 PIK3R5Q8WYR1 880 aa7.09□□□□□ -1.27
IFIT1-201ENST00000371804 SIRT1Q96EB6 747 aa7.09□□□□□ -1.27
IFIT1-201ENST00000371804 NBPF3Q9H094 633 aa7.09□□□□□ -1.27
IFIT1-201ENST00000371804 CALCOCO1Q9P1Z2 691 aa7.09□□□□□ -1.27
IFIT1-201ENST00000371804 KIF1AQ12756 1690 aa7.09□□□□□ -1.27
IFIT1-201ENST00000371804 FMN2Q9NZ56 1722 aa7.09□□□□□ -1.27
IFIT1-201ENST00000371804 NUTM2FA1L443 756 aa7.09□□□□□ -1.28
IFIT1-201ENST00000371804 DHX16O60231 1041 aaKnown RBP7.09□□□□□ -1.28
IFIT1-201ENST00000371804 VPS72Q15906 364 aa7.09□□□□□ -1.28
IFIT1-201ENST00000371804 MKL1Q969V6 931 aa7.09□□□□□ -1.28
IFIT1-201ENST00000371804 BRMS1Q9HCU9 246 aa7.09□□□□□ -1.28
IFIT1-201ENST00000371804 DONSONQ9NYP3 566 aa7.09□□□□□ -1.28
IFIT1-201ENST00000371804 ABCA3Q99758 1704 aa7.08□□□□□ -1.28
IFIT1-201ENST00000371804 ONECUT3O60422 494 aaPredicted RBP7.08□□□□□ -1.28
IFIT1-201ENST00000371804 BAG6P46379 1132 aa7.08□□□□□ -1.28
IFIT1-201ENST00000371804 DNAJC14Q6Y2X3 702 aaPredicted RBP7.08□□□□□ -1.28
IFIT1-201ENST00000371804 KRT27Q7Z3Y8 459 aa7.08□□□□□ -1.28
IFIT1-201ENST00000371804 ARHGEF1Q92888 912 aaKnown RBP7.08□□□□□ -1.28
IFIT1-201ENST00000371804 C1orf115Q9H7X2 142 aa7.08□□□□□ -1.28
IFIT1-201ENST00000371804 KNDC1Q76NI1 1749 aa7.08□□□□□ -1.28
IFIT1-201ENST00000371804 CCDC144AA2RUR9 1427 aa7.08□□□□□ -1.28
IFIT1-201ENST00000371804 RPGRIP1LQ68CZ1 1315 aa7.07□□□□□ -1.28
IFIT1-201ENST00000371804 BRD1O95696 1058 aa7.07□□□□□ -1.28
IFIT1-201ENST00000371804 CT47B1P0C2W7 299 aaPredicted RBP7.07□□□□□ -1.28
IFIT1-201ENST00000371804 LIG1P18858 919 aa7.07□□□□□ -1.28
IFIT1-201ENST00000371804 CBX1P83916 185 aa7.07□□□□□ -1.28
IFIT1-201ENST00000371804 LRCH2Q5VUJ6 765 aa7.07□□□□□ -1.28
IFIT1-201ENST00000371804 SDR16C5Q8N3Y7 309 aa7.07□□□□□ -1.28
IFIT1-201ENST00000371804 SUDS3Q9H7L9 328 aaPredicted RBP7.07□□□□□ -1.28
IFIT1-201ENST00000371804 RGPD1P0DJD0 1748 aa7.07□□□□□ -1.28
IFIT1-201ENST00000371804 TECPR2O15040 1411 aa7.07□□□□□ -1.28
IFIT1-201ENST00000371804 RGPD8O14715 1765 aaPredicted RBP7.07□□□□□ -1.28
IFIT1-201ENST00000371804 CCER2I3L3R5 266 aa7.07□□□□□ -1.28
IFIT1-201ENST00000371804 TULP2O00295 520 aa7.07□□□□□ -1.28
IFIT1-201ENST00000371804 DDX46Q7L014 1031 aaKnown RBP7.07□□□□□ -1.28
IFIT1-201ENST00000371804 KRT28Q7Z3Y7 464 aa7.07□□□□□ -1.28
IFIT1-201ENST00000371804 WAPLQ7Z5K2 1190 aa7.07□□□□□ -1.28
IFIT1-201ENST00000371804 MYH16Q9H6N6 1097 aa7.07□□□□□ -1.28
IFIT1-201ENST00000371804 NUB1Q9Y5A7 615 aa7.07□□□□□ -1.28
IFIT1-201ENST00000371804 TNS3Q68CZ2 1445 aa7.06□□□□□ -1.28
IFIT1-201ENST00000371804 NRAPQ86VF7 1730 aa7.06□□□□□ -1.28
IFIT1-201ENST00000371804 KIF3CO14782 793 aa7.06□□□□□ -1.28
IFIT1-201ENST00000371804 FRAT2O75474 233 aaPredicted RBP7.06□□□□□ -1.28
IFIT1-201ENST00000371804 XRCC6P12956 609 aaKnown RBP eCLIP7.06□□□□□ -1.28
IFIT1-201ENST00000371804 CABLES1Q8TDN4 633 aa7.06□□□□□ -1.28
IFIT1-201ENST00000371804 BORCS6Q96GS4 357 aa7.06□□□□□ -1.28
IFIT1-201ENST00000371804 ANAPC4Q9UJX5 808 aa7.06□□□□□ -1.28
IFIT1-201ENST00000371804 R3HCC1Q9Y3T6 440 aaKnown RBP7.06□□□□□ -1.28
IFIT1-201ENST00000371804 IFT172Q9UG01 1749 aa7.06□□□□□ -1.28
IFIT1-201ENST00000371804 PLEKHH1Q9ULM0 1364 aa7.06□□□□□ -1.28
IFIT1-201ENST00000371804 ZBED9Q6R2W3 1325 aa7.05□□□□□ -1.28
IFIT1-201ENST00000371804 CAPN2P17655 700 aa7.05□□□□□ -1.28
IFIT1-201ENST00000371804 MRE11P49959 708 aa7.05□□□□□ -1.28
IFIT1-201ENST00000371804 EN1Q05925 392 aaPredicted RBP7.05□□□□□ -1.28
IFIT1-201ENST00000371804 R3HDM1Q15032 1099 aaKnown RBP7.05□□□□□ -1.28
IFIT1-201ENST00000371804 RBM26Q5T8P6 1007 aaKnown RBP7.05□□□□□ -1.28
IFIT1-201ENST00000371804 TNS1Q9HBL0 1735 aaKnown RBP7.05□□□□□ -1.28
IFIT1-201ENST00000371804 KNSTRNQ9Y448 316 aa7.05□□□□□ -1.28
IFIT1-201ENST00000371804 A0A0G2JS52 829 aa7.04□□□□□ -1.28
IFIT1-201ENST00000371804 PPP1R12AO14974 1030 aaPredicted RBP7.04□□□□□ -1.28
IFIT1-201ENST00000371804 CTAGE5O15320 804 aa7.04□□□□□ -1.28
IFIT1-201ENST00000371804 MSNP26038 577 aaKnown RBP7.04□□□□□ -1.28
IFIT1-201ENST00000371804 SSFA2P28290 1259 aa7.04□□□□□ -1.28
IFIT1-201ENST00000371804 NINLQ9Y2I6 1382 aa7.04□□□□□ -1.28
IFIT1-201ENST00000371804 ADGRF5Q8IZF2 1346 aa7.04□□□□□ -1.28
IFIT1-201ENST00000371804 RRBP1Q9P2E9 1410 aaKnown RBP7.04□□□□□ -1.28
IFIT1-201ENST00000371804 TPM3P06753 285 aa7.04□□□□□ -1.28
IFIT1-201ENST00000371804 BIRC2Q13490 618 aa7.04□□□□□ -1.28
IFIT1-201ENST00000371804 FAM98CQ17RN3 349 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms