RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 KCNQ3O43525 872 aa22.29■■□□□ 1.16
SSBP3-203ENST00000371319 CARD10Q9BWT7 1032 aa22.29■■□□□ 1.16
SSBP3-203ENST00000371319 ZBTB40Q9NUA8 1239 aa22.29■■□□□ 1.16
SSBP3-203ENST00000371319 PTPRCP08575 1304 aa22.28■■□□□ 1.16
SSBP3-203ENST00000371319 SLC4A2P04920 1241 aa22.28■■□□□ 1.16
SSBP3-203ENST00000371319 IFNL2Q8IZJ0 200 aa22.28■■□□□ 1.16
SSBP3-203ENST00000371319 MRC1P22897 1456 aa22.27■■□□□ 1.16
SSBP3-203ENST00000371319 SHANK3Q9BYB0 1731 aa22.27■■□□□ 1.16
SSBP3-203ENST00000371319 SKAP1Q86WV1 359 aa22.27■■□□□ 1.16
SSBP3-203ENST00000371319 CYP27B1O15528 508 aa22.26■■□□□ 1.15
SSBP3-203ENST00000371319 CCDC30Q5VVM6 783 aa22.26■■□□□ 1.15
SSBP3-203ENST00000371319 LARP1Q6PKG0 1096 aaKnown RBP22.26■■□□□ 1.15
SSBP3-203ENST00000371319 G2E3Q7L622 706 aa22.25■■□□□ 1.15
SSBP3-203ENST00000371319 STRN4Q9NRL3 753 aa22.25■■□□□ 1.15
SSBP3-203ENST00000371319 ZBTB7BO15156 539 aaPredicted RBP22.25■■□□□ 1.15
SSBP3-203ENST00000371319 HOXB7P09629 217 aa22.25■■□□□ 1.15
SSBP3-203ENST00000371319 EVA1CP58658 441 aa22.24■■□□□ 1.15
SSBP3-203ENST00000371319 INTS3Q68E01 1043 aaKnown RBP22.24■■□□□ 1.15
SSBP3-203ENST00000371319 HEG1Q9ULI3 1381 aa22.23■■□□□ 1.15
SSBP3-203ENST00000371319 TOM1O60784 492 aa22.23■■□□□ 1.15
SSBP3-203ENST00000371319 STK31Q9BXU1 1019 aa22.23■■□□□ 1.15
SSBP3-203ENST00000371319 RWDD1Q9H446 243 aaPredicted RBP22.23■■□□□ 1.15
SSBP3-203ENST00000371319 SLC52A2Q9HAB3 445 aa22.23■■□□□ 1.15
SSBP3-203ENST00000371319 NECTIN2Q92692 538 aa22.21■■□□□ 1.15
SSBP3-203ENST00000371319 DCAF5Q96JK2 942 aa22.21■■□□□ 1.15
SSBP3-203ENST00000371319 CHMP4BQ9H444 224 aaKnown RBP22.21■■□□□ 1.15
SSBP3-203ENST00000371319 BTG4Q9NY30 223 aa22.21■■□□□ 1.15
SSBP3-203ENST00000371319 PLCH1Q4KWH8 1693 aa22.21■■□□□ 1.15
SSBP3-203ENST00000371319 HSP90AB1P08238 724 aaKnown RBP22.21■■□□□ 1.15
SSBP3-203ENST00000371319 IL2RBP14784 551 aa22.21■■□□□ 1.15
SSBP3-203ENST00000371319 HDAC1Q13547 482 aaPredicted RBP22.21■■□□□ 1.15
SSBP3-203ENST00000371319 HDGFL1Q5TGJ6 251 aa22.21■■□□□ 1.15
SSBP3-203ENST00000371319 ZCRB1Q8TBF4 217 aaKnown RBP22.21■■□□□ 1.15
SSBP3-203ENST00000371319 N4BP2Q86UW6 1770 aaPredicted RBP22.2■■□□□ 1.14
SSBP3-203ENST00000371319 RBM19Q9Y4C8 960 aaKnown RBP22.2■■□□□ 1.14
SSBP3-203ENST00000371319 PCDH11XQ9BZA7 1347 aa22.19■■□□□ 1.14
SSBP3-203ENST00000371319 PCDH11YQ9BZA8 1340 aa22.19■■□□□ 1.14
SSBP3-203ENST00000371319 PIP4K2BP78356 416 aa22.18■■□□□ 1.14
SSBP3-203ENST00000371319 FLIIQ13045 1269 aa22.18■■□□□ 1.14
SSBP3-203ENST00000371319 NRAPQ86VF7 1730 aa22.17■■□□□ 1.14
SSBP3-203ENST00000371319 C5P01031 1676 aa22.17■■□□□ 1.14
SSBP3-203ENST00000371319 GIGYF1O75420 1035 aaPredicted RBP22.16■■□□□ 1.14
SSBP3-203ENST00000371319 NFATC2IPQ8NCF5 419 aa22.16■■□□□ 1.14
SSBP3-203ENST00000371319 WNK3Q9BYP7 1800 aa22.16■■□□□ 1.14
SSBP3-203ENST00000371319 EIF2S2P20042 333 aaKnown RBP22.16■■□□□ 1.14
SSBP3-203ENST00000371319 DISP2A7MBM2 1401 aa22.15■■□□□ 1.14
SSBP3-203ENST00000371319 NKX1-1Q15270 411 aaPredicted RBP22.15■■□□□ 1.14
SSBP3-203ENST00000371319 ZNF790Q6PG37 636 aa22.15■■□□□ 1.14
SSBP3-203ENST00000371319 CHMP4AQ9BY43 222 aa22.15■■□□□ 1.14
SSBP3-203ENST00000371319 F6X3S4 739 aa22.14■■□□□ 1.13
SSBP3-203ENST00000371319 SLC39A6Q13433 755 aa22.14■■□□□ 1.13
SSBP3-203ENST00000371319 C1orf115Q9H7X2 142 aa22.14■■□□□ 1.13
SSBP3-203ENST00000371319 PXDNLA1KZ92 1463 aa22.13■■□□□ 1.13
SSBP3-203ENST00000371319 UBAP1LF5GYI3 381 aa22.13■■□□□ 1.13
SSBP3-203ENST00000371319 CHPF2Q9P2E5 772 aa22.13■■□□□ 1.13
SSBP3-203ENST00000371319 GLI3P10071 1580 aa22.13■■□□□ 1.13
SSBP3-203ENST00000371319 TOGARAM1Q9Y4F4 1720 aa22.13■■□□□ 1.13
SSBP3-203ENST00000371319 PRAMEF22A3QJZ6 481 aa22.12■■□□□ 1.13
SSBP3-203ENST00000371319 CCT4P50991 539 aaKnown RBP22.12■■□□□ 1.13
SSBP3-203ENST00000371319 FKBP5Q13451 457 aaPredicted RBP22.12■■□□□ 1.13
SSBP3-203ENST00000371319 PDZRN3Q9UPQ7 1066 aa22.12■■□□□ 1.13
SSBP3-203ENST00000371319 PAPPAQ13219 1627 aa22.12■■□□□ 1.13
SSBP3-203ENST00000371319 CABP4P57796 275 aa22.12■■□□□ 1.13
SSBP3-203ENST00000371319 PHAXQ9H814 394 aaKnown RBP22.12■■□□□ 1.13
SSBP3-203ENST00000371319 SMC5Q8IY18 1101 aa22.11■■□□□ 1.13
SSBP3-203ENST00000371319 RGS3P49796 1198 aa22.1■■□□□ 1.13
SSBP3-203ENST00000371319 USP35Q9P2H5 1018 aa22.1■■□□□ 1.13
SSBP3-203ENST00000371319 UBR2Q8IWV8 1755 aa22.1■■□□□ 1.13
SSBP3-203ENST00000371319 ADAMTS2O95450 1211 aa22.09■■□□□ 1.13
SSBP3-203ENST00000371319 SLC4A10Q6U841 1118 aa22.09■■□□□ 1.13
SSBP3-203ENST00000371319 SIRT2Q8IXJ6 389 aa22.09■■□□□ 1.13
SSBP3-203ENST00000371319 NWD2Q9ULI1 1742 aa22.09■■□□□ 1.13
SSBP3-203ENST00000371319 ATP10DQ9P241 1426 aa22.08■■□□□ 1.13
SSBP3-203ENST00000371319 ERVV-2B6SEH9 535 aa22.08■■□□□ 1.13
SSBP3-203ENST00000371319 DDX54Q8TDD1 881 aaKnown RBP22.08■■□□□ 1.13
SSBP3-203ENST00000371319 MEIS3Q99687 375 aa22.08■■□□□ 1.13
SSBP3-203ENST00000371319 DBF4Q9UBU7 674 aaPredicted RBP22.08■■□□□ 1.13
SSBP3-203ENST00000371319 ZNF496Q96IT1 587 aaPredicted RBP22.08■■□□□ 1.12
SSBP3-203ENST00000371319 LAMB4A4D0S4 1761 aa22.07■■□□□ 1.12
SSBP3-203ENST00000371319 PDE4AP27815 886 aa22.07■■□□□ 1.12
SSBP3-203ENST00000371319 ANXA1P04083 346 aa22.06■■□□□ 1.12
SSBP3-203ENST00000371319 PROSER3Q2NL68 480 aa22.06■■□□□ 1.12
SSBP3-203ENST00000371319 NUTM2BA6NNL0 878 aaPredicted RBP22.05■■□□□ 1.12
SSBP3-203ENST00000371319 NUTM2EB1AL46 878 aaPredicted RBP22.05■■□□□ 1.12
SSBP3-203ENST00000371319 NUTM2AQ8IVF1 878 aaPredicted RBP22.05■■□□□ 1.12
SSBP3-203ENST00000371319 TTC5Q8N0Z6 440 aa22.05■■□□□ 1.12
SSBP3-203ENST00000371319 BACH2Q9BYV9 841 aa22.05■■□□□ 1.12
SSBP3-203ENST00000371319 SLIT2O94813 1529 aa22.04■■□□□ 1.12
SSBP3-203ENST00000371319 KCPQ6ZWJ8 1503 aa22.04■■□□□ 1.12
SSBP3-203ENST00000371319 PDIA6Q15084 440 aa22.04■■□□□ 1.12
SSBP3-203ENST00000371319 ADCY9O60503 1353 aa22.04■■□□□ 1.12
SSBP3-203ENST00000371319 ANKRD44Q8N8A2 993 aa22.04■■□□□ 1.12
SSBP3-203ENST00000371319 FMNL2Q96PY5 1086 aa22.04■■□□□ 1.12
SSBP3-203ENST00000371319 SNRPA1P09661 255 aaKnown RBP22.03■■□□□ 1.12
SSBP3-203ENST00000371319 DDX21Q9NR30 783 aaKnown RBP eCLIP22.03■■□□□ 1.12
SSBP3-203ENST00000371319 LRP6O75581 1613 aa22.02■■□□□ 1.12
SSBP3-203ENST00000371319 TNS2Q63HR2 1409 aa22.02■■□□□ 1.12
SSBP3-203ENST00000371319 CEP85Q6P2H3 762 aa22.02■■□□□ 1.12
SSBP3-203ENST00000371319 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
SSBP3-203ENST00000371319 HYPKQ9NX55 129 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms