RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 ERVV-2B6SEH9 535 aa14.93□□□□□ -0.02
EXOSC1-202ENST00000370885 AMOTQ4VCS5 1084 aa14.93□□□□□ -0.02
EXOSC1-202ENST00000370885 MSH5O43196 834 aa14.92□□□□□ -0.02
EXOSC1-202ENST00000370885 LGR6Q9HBX8 967 aa14.92□□□□□ -0.02
EXOSC1-202ENST00000370885 MAP3K5Q99683 1374 aa14.92□□□□□ -0.02
EXOSC1-202ENST00000370885 SCN11AQ9UI33 1791 aa14.91□□□□□ -0.02
EXOSC1-202ENST00000370885 ATP6V1AP38606 617 aa14.91□□□□□ -0.02
EXOSC1-202ENST00000370885 NLGN2Q8NFZ4 835 aa14.91□□□□□ -0.02
EXOSC1-202ENST00000370885 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.9□□□□□ -0.02
EXOSC1-202ENST00000370885 DIAPH1O60610 1272 aaKnown RBP14.9□□□□□ -0.02
EXOSC1-202ENST00000370885 PHF14O94880 888 aa14.9□□□□□ -0.02
EXOSC1-202ENST00000370885 HSP90AB1P08238 724 aaKnown RBP14.9□□□□□ -0.02
EXOSC1-202ENST00000370885 MTHFSDQ2M296 383 aaKnown RBP14.9□□□□□ -0.02
EXOSC1-202ENST00000370885 NFATC2IPQ8NCF5 419 aa14.9□□□□□ -0.02
EXOSC1-202ENST00000370885 MYH14Q7Z406 1995 aaKnown RBP14.89□□□□□ -0.03
EXOSC1-202ENST00000370885 CABP4P57796 275 aa14.89□□□□□ -0.03
EXOSC1-202ENST00000370885 AK7Q96M32 723 aa14.89□□□□□ -0.03
EXOSC1-202ENST00000370885 ZNF831Q5JPB2 1677 aa14.89□□□□□ -0.03
EXOSC1-202ENST00000370885 VIRMAQ69YN4 1812 aaKnown RBP14.89□□□□□ -0.03
EXOSC1-202ENST00000370885 COL5A3P25940 1745 aaPredicted RBP14.89□□□□□ -0.03
EXOSC1-202ENST00000370885 POLD1P28340 1107 aa14.88□□□□□ -0.03
EXOSC1-202ENST00000370885 C1orf141Q5JVX7 400 aa14.88□□□□□ -0.03
EXOSC1-202ENST00000370885 KLHL34Q8N239 644 aa14.88□□□□□ -0.03
EXOSC1-202ENST00000370885 RBM42Q9BTD8 480 aaKnown RBP14.88□□□□□ -0.03
EXOSC1-202ENST00000370885 ADAMTS7Q9UKP4 1686 aa14.87□□□□□ -0.03
EXOSC1-202ENST00000370885 GNPATO15228 680 aa14.87□□□□□ -0.03
EXOSC1-202ENST00000370885 AKAP4Q5JQC9 854 aa14.87□□□□□ -0.03
EXOSC1-202ENST00000370885 TJP1Q07157 1748 aa14.86□□□□□ -0.03
EXOSC1-202ENST00000370885 RNMTO43148 476 aaKnown RBP14.86□□□□□ -0.03
EXOSC1-202ENST00000370885 PTCD1O75127 700 aaKnown RBP14.86□□□□□ -0.03
EXOSC1-202ENST00000370885 YY1P25490 414 aa14.86□□□□□ -0.03
EXOSC1-202ENST00000370885 MRC1P22897 1456 aa14.85□□□□□ -0.03
EXOSC1-202ENST00000370885 SSFA2P28290 1259 aa14.85□□□□□ -0.03
EXOSC1-202ENST00000370885 PPP2R1AP30153 589 aa14.85□□□□□ -0.03
EXOSC1-202ENST00000370885 FLAD1Q8NFF5 587 aa14.85□□□□□ -0.03
EXOSC1-202ENST00000370885 U2SURPO15042 1029 aaKnown RBP14.84□□□□□ -0.03
EXOSC1-202ENST00000370885 SLC39A6Q13433 755 aa14.84□□□□□ -0.03
EXOSC1-202ENST00000370885 SLC52A2Q9HAB3 445 aa14.84□□□□□ -0.03
EXOSC1-202ENST00000370885 RC3H1Q5TC82 1133 aaKnown RBP14.83□□□□□ -0.04
EXOSC1-202ENST00000370885 PHACTR3Q96KR7 559 aa14.83□□□□□ -0.04
EXOSC1-202ENST00000370885 YBX3P16989 372 aaKnown RBP eCLIP14.82□□□□□ -0.044e-8■□□□□ 10.7
EXOSC1-202ENST00000370885 IL17REQ8NFR9 667 aa14.82□□□□□ -0.04
EXOSC1-202ENST00000370885 ARHGEF1Q92888 912 aaKnown RBP14.82□□□□□ -0.04
EXOSC1-202ENST00000370885 CNTNAP4Q9C0A0 1308 aa14.82□□□□□ -0.04
EXOSC1-202ENST00000370885 KCPQ6ZWJ8 1503 aa14.82□□□□□ -0.04
EXOSC1-202ENST00000370885 CICQ96RK0 1608 aaPredicted RBP14.81□□□□□ -0.04
EXOSC1-202ENST00000370885 C4AP0C0L4 1744 aa14.81□□□□□ -0.04
EXOSC1-202ENST00000370885 INTS5Q6P9B9 1019 aaKnown RBP14.81□□□□□ -0.04
EXOSC1-202ENST00000370885 RSPH6AQ9H0K4 717 aa14.81□□□□□ -0.04
EXOSC1-202ENST00000370885 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
EXOSC1-202ENST00000370885 RPS6KA4O75676 772 aa14.8□□□□□ -0.04
EXOSC1-202ENST00000370885 CRKLP46109 303 aaKnown RBP14.8□□□□□ -0.04
EXOSC1-202ENST00000370885 DNAJC10Q8IXB1 793 aa14.8□□□□□ -0.04
EXOSC1-202ENST00000370885 RTCBQ9Y3I0 505 aaKnown RBP14.8□□□□□ -0.04
EXOSC1-202ENST00000370885 GYS1P13807 737 aa14.79□□□□□ -0.04
EXOSC1-202ENST00000370885 HMGB2P26583 209 aaKnown RBP14.79□□□□□ -0.04
EXOSC1-202ENST00000370885 PRKAR2BP31323 418 aa14.79□□□□□ -0.04
EXOSC1-202ENST00000370885 CHD4Q14839 1912 aa14.79□□□□□ -0.04
EXOSC1-202ENST00000370885 GPR162Q16538 588 aa14.79□□□□□ -0.04
EXOSC1-202ENST00000370885 TRAPPC3LQ5T215 181 aa14.79□□□□□ -0.04
EXOSC1-202ENST00000370885 SIPA1L3O60292 1781 aaPredicted RBP14.78□□□□□ -0.04
EXOSC1-202ENST00000370885 UBR2Q8IWV8 1755 aa14.78□□□□□ -0.04
EXOSC1-202ENST00000370885 MMP10P09238 476 aa14.78□□□□□ -0.04
EXOSC1-202ENST00000370885 PELP1Q8IZL8 1130 aaKnown RBP14.78□□□□□ -0.04
EXOSC1-202ENST00000370885 SRP68Q9UHB9 627 aaKnown RBP14.78□□□□□ -0.04
EXOSC1-202ENST00000370885 CD2APQ9Y5K6 639 aa14.78□□□□□ -0.04
EXOSC1-202ENST00000370885 CYP19A1P11511 503 aaPredicted RBP14.77□□□□□ -0.05
EXOSC1-202ENST00000370885 WWC3Q9ULE0 1092 aa14.77□□□□□ -0.05
EXOSC1-202ENST00000370885 KIAA1551Q9HCM1 1747 aa14.77□□□□□ -0.05
EXOSC1-202ENST00000370885 CEMIPQ8WUJ3 1361 aa14.75□□□□□ -0.05
EXOSC1-202ENST00000370885 GNAT3A8MTJ3 354 aa14.75□□□□□ -0.05
EXOSC1-202ENST00000370885 KCNQ3O43525 872 aa14.75□□□□□ -0.05
EXOSC1-202ENST00000370885 U2AF1L5P0DN76 240 aaPredicted RBP14.75□□□□□ -0.05
EXOSC1-202ENST00000370885 ADRA2BP18089 450 aa14.75□□□□□ -0.05
EXOSC1-202ENST00000370885 U2AF1Q01081 240 aaKnown RBP eCLIP14.75□□□□□ -0.05
EXOSC1-202ENST00000370885 ZNF784Q8NCA9 323 aaPredicted RBP14.75□□□□□ -0.05
EXOSC1-202ENST00000370885 CFAP53Q96M91 514 aa14.75□□□□□ -0.05
EXOSC1-202ENST00000370885 KIF13BQ9NQT8 1826 aa14.75□□□□□ -0.05
EXOSC1-202ENST00000370885 FKBP8Q14318 412 aa14.74□□□□□ -0.05
EXOSC1-202ENST00000370885 GAS2L2Q8NHY3 880 aa14.74□□□□□ -0.05
EXOSC1-202ENST00000370885 ZNF496Q96IT1 587 aaPredicted RBP14.74□□□□□ -0.05
EXOSC1-202ENST00000370885 SOS1Q07889 1333 aaPredicted RBP14.73□□□□□ -0.05
EXOSC1-202ENST00000370885 USP42Q9H9J4 1324 aaKnown RBP14.73□□□□□ -0.05
EXOSC1-202ENST00000370885 RFC4P35249 363 aa14.73□□□□□ -0.05
EXOSC1-202ENST00000370885 DDR1Q08345 913 aa14.73□□□□□ -0.05
EXOSC1-202ENST00000370885 CCDC87Q9NVE4 849 aa14.73□□□□□ -0.05
EXOSC1-202ENST00000370885 ZBTB1Q9Y2K1 713 aa14.73□□□□□ -0.05
EXOSC1-202ENST00000370885 N4BP2Q86UW6 1770 aaPredicted RBP14.73□□□□□ -0.05
EXOSC1-202ENST00000370885 PXDNLA1KZ92 1463 aa14.72□□□□□ -0.05
EXOSC1-202ENST00000370885 DCTN1Q14203 1278 aa14.72□□□□□ -0.05
EXOSC1-202ENST00000370885 NLGN1Q8N2Q7 840 aa14.72□□□□□ -0.05
EXOSC1-202ENST00000370885 FCHSD2O94868 740 aa14.71□□□□□ -0.05
EXOSC1-202ENST00000370885 ZNF790Q6PG37 636 aa14.71□□□□□ -0.05
EXOSC1-202ENST00000370885 MCM10Q7L590 875 aa14.71□□□□□ -0.05
EXOSC1-202ENST00000370885 BCL2L12Q9HB09 334 aa14.71□□□□□ -0.05
EXOSC1-202ENST00000370885 NUDCQ9Y266 331 aa14.71□□□□□ -0.05
EXOSC1-202ENST00000370885 C10orf71Q711Q0 1435 aa14.71□□□□□ -0.05
EXOSC1-202ENST00000370885 TM4SF1P30408 202 aa14.7□□□□□ -0.06
EXOSC1-202ENST00000370885 TEFQ10587 303 aa14.7□□□□□ -0.06
EXOSC1-202ENST00000370885 DDX10Q13206 875 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms