RNA–Protein interactions for RNA: ENST00000370367.3

KHDC3L-201, Transcript of KH domain containing 3 like, subcortical maternal complex member, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KHDC3L, Length 1,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3L-201ENST00000370367 ATP6V1AP38606 617 aa28.07■■■□□ 2.08
KHDC3L-201ENST00000370367 PPP2R1AP30153 589 aa28.06■■■□□ 2.08
KHDC3L-201ENST00000370367 LINC00116Q8NCU8 138 aa28.06■■■□□ 2.08
KHDC3L-201ENST00000370367 FHDC1Q9C0D6 1143 aaPredicted RBP28.06■■■□□ 2.08
KHDC3L-201ENST00000370367 U2SURPO15042 1029 aaKnown RBP28.05■■■□□ 2.08
KHDC3L-201ENST00000370367 ITPK1Q13572 414 aa28.05■■■□□ 2.08
KHDC3L-201ENST00000370367 COL24A1Q17RW2 1714 aa28.05■■■□□ 2.08
KHDC3L-201ENST00000370367 DCAF8L1A6NGE4 600 aa28.04■■■□□ 2.08
KHDC3L-201ENST00000370367 SSFA2P28290 1259 aa28.04■■■□□ 2.08
KHDC3L-201ENST00000370367 MTHFSDQ2M296 383 aaKnown RBP28.04■■■□□ 2.08
KHDC3L-201ENST00000370367 SYT17Q9BSW7 474 aa28.04■■■□□ 2.08
KHDC3L-201ENST00000370367 ZNF831Q5JPB2 1677 aa28.03■■■□□ 2.08
KHDC3L-201ENST00000370367 MSH5O43196 834 aa28.03■■■□□ 2.08
KHDC3L-201ENST00000370367 NFATC2IPQ8NCF5 419 aa28.03■■■□□ 2.08
KHDC3L-201ENST00000370367 NUDCQ9Y266 331 aa28.03■■■□□ 2.08
KHDC3L-201ENST00000370367 MRC1P22897 1456 aa28.02■■■□□ 2.08
KHDC3L-201ENST00000370367 SLC52A2Q9HAB3 445 aa28.01■■■□□ 2.07
KHDC3L-201ENST00000370367 RNMTO43148 476 aaKnown RBP28■■■□□ 2.07
KHDC3L-201ENST00000370367 GAS2L2Q8NHY3 880 aa28■■■□□ 2.07
KHDC3L-201ENST00000370367 SLC4A9Q96Q91 983 aa28■■■□□ 2.07
KHDC3L-201ENST00000370367 RBM42Q9BTD8 480 aaKnown RBP28■■■□□ 2.07
KHDC3L-201ENST00000370367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.99■■■□□ 2.07
KHDC3L-201ENST00000370367 RC3H1Q5TC82 1133 aaKnown RBP27.98■■■□□ 2.07
KHDC3L-201ENST00000370367 SCN11AQ9UI33 1791 aa27.98■■■□□ 2.07
KHDC3L-201ENST00000370367 CNTNAP4Q9C0A0 1308 aa27.97■■■□□ 2.07
KHDC3L-201ENST00000370367 GNPATO15228 680 aa27.97■■■□□ 2.07
KHDC3L-201ENST00000370367 AMIGO3Q86WK7 504 aa27.97■■■□□ 2.07
KHDC3L-201ENST00000370367 LGR6Q9HBX8 967 aa27.97■■■□□ 2.07
KHDC3L-201ENST00000370367 ADAMTS7Q9UKP4 1686 aa27.97■■■□□ 2.07
KHDC3L-201ENST00000370367 UBR3Q6ZT12 1888 aa27.95■■■□□ 2.07
KHDC3L-201ENST00000370367 PHF14O94880 888 aa27.95■■■□□ 2.06
KHDC3L-201ENST00000370367 RSPH6AQ9H0K4 717 aa27.95■■■□□ 2.06
KHDC3L-201ENST00000370367 ADRA2BP18089 450 aa27.94■■■□□ 2.06
KHDC3L-201ENST00000370367 PTCD1O75127 700 aaKnown RBP27.93■■■□□ 2.06
KHDC3L-201ENST00000370367 RTCBQ9Y3I0 505 aaKnown RBP27.93■■■□□ 2.06
KHDC3L-201ENST00000370367 GNAT3A8MTJ3 354 aa27.92■■■□□ 2.06
KHDC3L-201ENST00000370367 FCHSD2O94868 740 aa27.92■■■□□ 2.06
KHDC3L-201ENST00000370367 PRKAR2BP31323 418 aa27.92■■■□□ 2.06
KHDC3L-201ENST00000370367 MSL1Q68DK7 614 aa27.92■■■□□ 2.06
KHDC3L-201ENST00000370367 U2AF1L5P0DN76 240 aaPredicted RBP27.91■■■□□ 2.06
KHDC3L-201ENST00000370367 U2AF1Q01081 240 aaKnown RBP eCLIP27.91■■■□□ 2.06
KHDC3L-201ENST00000370367 CICQ96RK0 1608 aaPredicted RBP27.91■■■□□ 2.06
KHDC3L-201ENST00000370367 RPS6KA4O75676 772 aa27.89■■■□□ 2.06
KHDC3L-201ENST00000370367 TRAPPC3LQ5T215 181 aa27.89■■■□□ 2.06
KHDC3L-201ENST00000370367 COL5A3P25940 1745 aaPredicted RBP27.89■■■□□ 2.05
KHDC3L-201ENST00000370367 SMIM5Q71RC9 77 aa27.87■■■□□ 2.05
KHDC3L-201ENST00000370367 PHACTR3Q96KR7 559 aa27.87■■■□□ 2.05
KHDC3L-201ENST00000370367 RALBP1Q15311 655 aa27.86■■■□□ 2.05
KHDC3L-201ENST00000370367 VSIG10Q8N0Z9 540 aa27.86■■■□□ 2.05
KHDC3L-201ENST00000370367 IL17REQ8NFR9 667 aa27.86■■■□□ 2.05
KHDC3L-201ENST00000370367 CEMIPQ8WUJ3 1361 aa27.86■■■□□ 2.05
KHDC3L-201ENST00000370367 CRKLP46109 303 aaKnown RBP27.85■■■□□ 2.05
KHDC3L-201ENST00000370367 TEFQ10587 303 aa27.85■■■□□ 2.05
KHDC3L-201ENST00000370367 KLHL34Q8N239 644 aa27.85■■■□□ 2.05
KHDC3L-201ENST00000370367 CD2APQ9Y5K6 639 aa27.85■■■□□ 2.05
KHDC3L-201ENST00000370367 KCPQ6ZWJ8 1503 aa27.83■■■□□ 2.05
KHDC3L-201ENST00000370367 SLC39A6Q13433 755 aa27.83■■■□□ 2.05
KHDC3L-201ENST00000370367 ARHGEF1Q92888 912 aaKnown RBP27.83■■■□□ 2.05
KHDC3L-201ENST00000370367 NLGN1Q8N2Q7 840 aa27.82■■■□□ 2.04
KHDC3L-201ENST00000370367 TJP1Q07157 1748 aa27.81■■■□□ 2.04
KHDC3L-201ENST00000370367 RFC4P35249 363 aa27.81■■■□□ 2.04
KHDC3L-201ENST00000370367 DDX10Q13206 875 aaKnown RBP27.81■■■□□ 2.04
KHDC3L-201ENST00000370367 TTC5Q8N0Z6 440 aa27.81■■■□□ 2.04
KHDC3L-201ENST00000370367 DNAJC10Q8IXB1 793 aa27.8■■■□□ 2.04
KHDC3L-201ENST00000370367 HTATSF1O43719 755 aaKnown RBP27.79■■■□□ 2.04
KHDC3L-201ENST00000370367 ZEB1P37275 1124 aaPredicted RBP27.79■■■□□ 2.04
KHDC3L-201ENST00000370367 INTS5Q6P9B9 1019 aaKnown RBP27.79■■■□□ 2.04
KHDC3L-201ENST00000370367 NLGN2Q8NFZ4 835 aa27.79■■■□□ 2.04
KHDC3L-201ENST00000370367 CYP19A1P11511 503 aaPredicted RBP27.78■■■□□ 2.04
KHDC3L-201ENST00000370367 ZNF790Q6PG37 636 aa27.78■■■□□ 2.04
KHDC3L-201ENST00000370367 CCDC87Q9NVE4 849 aa27.78■■■□□ 2.04
KHDC3L-201ENST00000370367 MYH14Q7Z406 1995 aaKnown RBP27.77■■■□□ 2.04
KHDC3L-201ENST00000370367 VIRMAQ69YN4 1812 aaKnown RBP27.77■■■□□ 2.04
KHDC3L-201ENST00000370367 NEFMP07197 916 aa27.77■■■□□ 2.04
KHDC3L-201ENST00000370367 YY1P25490 414 aa27.77■■■□□ 2.04
KHDC3L-201ENST00000370367 RTF1Q92541 710 aaKnown RBP27.77■■■□□ 2.04
KHDC3L-201ENST00000370367 UTRNP46939 3433 aa27.77■■■□□ 2.04
KHDC3L-201ENST00000370367 GYS1P13807 737 aa27.76■■■□□ 2.03
KHDC3L-201ENST00000370367 PNNQ9H307 717 aaKnown RBP27.76■■■□□ 2.03
KHDC3L-201ENST00000370367 MMP10P09238 476 aa27.75■■■□□ 2.03
KHDC3L-201ENST00000370367 GPR162Q16538 588 aa27.75■■■□□ 2.03
KHDC3L-201ENST00000370367 UBR2Q8IWV8 1755 aa27.75■■■□□ 2.03
KHDC3L-201ENST00000370367 TEX13AQ9BXU3 409 aaPredicted RBP27.74■■■□□ 2.03
KHDC3L-201ENST00000370367 SOS1Q07889 1333 aaPredicted RBP27.73■■■□□ 2.03
KHDC3L-201ENST00000370367 USP42Q9H9J4 1324 aaKnown RBP27.73■■■□□ 2.03
KHDC3L-201ENST00000370367 STARD3NLO95772 234 aa27.73■■■□□ 2.03
KHDC3L-201ENST00000370367 ZNF496Q96IT1 587 aaPredicted RBP27.73■■■□□ 2.03
KHDC3L-201ENST00000370367 HEG1Q9ULI3 1381 aa27.73■■■□□ 2.03
KHDC3L-201ENST00000370367 MYBBP1AQ9BQG0 1328 aaKnown RBP27.72■■■□□ 2.03
KHDC3L-201ENST00000370367 FMNL2Q96PY5 1086 aa27.72■■■□□ 2.03
KHDC3L-201ENST00000370367 SIPA1L3O60292 1781 aaPredicted RBP27.72■■■□□ 2.03
KHDC3L-201ENST00000370367 BTBD11A6QL63 1104 aa27.71■■■□□ 2.03
KHDC3L-201ENST00000370367 PLEKHF1Q96S99 279 aa27.71■■■□□ 2.03
KHDC3L-201ENST00000370367 ZBTB1Q9Y2K1 713 aa27.69■■■□□ 2.02
KHDC3L-201ENST00000370367 C4AP0C0L4 1744 aa27.69■■■□□ 2.02
KHDC3L-201ENST00000370367 GRIN3BO60391 1043 aa27.68■■■□□ 2.02
KHDC3L-201ENST00000370367 MCM10Q7L590 875 aa27.68■■■□□ 2.02
KHDC3L-201ENST00000370367 COL15A1P39059 1388 aa27.67■■■□□ 2.02
KHDC3L-201ENST00000370367 GOLGB1Q14789 3259 aaKnown RBP27.66■■■□□ 2.02
KHDC3L-201ENST00000370367 ZPR1O75312 459 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms