RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 FANCIQ9NVI1 1328 aa22.24■■□□□ 1.15
UBE3D-203ENST00000369747 A0A0G2JS52 829 aa22.24■■□□□ 1.15
UBE3D-203ENST00000369747 RARSP54136 660 aaKnown RBP22.24■■□□□ 1.15
UBE3D-203ENST00000369747 MYT1Q01538 1121 aa22.24■■□□□ 1.15
UBE3D-203ENST00000369747 DCAF5Q96JK2 942 aa22.24■■□□□ 1.15
UBE3D-203ENST00000369747 EP400Q96L91 3159 aa22.24■■□□□ 1.15
UBE3D-203ENST00000369747 SCN11AQ9UI33 1791 aa22.24■■□□□ 1.15
UBE3D-203ENST00000369747 GNAI1P63096 354 aa22.23■■□□□ 1.15
UBE3D-203ENST00000369747 ZNF772Q68DY9 489 aaPredicted RBP22.23■■□□□ 1.15
UBE3D-203ENST00000369747 NKX1-1Q15270 411 aaPredicted RBP22.23■■□□□ 1.15
UBE3D-203ENST00000369747 MBIPQ9NS73 344 aa22.23■■□□□ 1.15
UBE3D-203ENST00000369747 HSP90AB1P08238 724 aaKnown RBP22.22■■□□□ 1.15
UBE3D-203ENST00000369747 THSD7AQ9UPZ6 1657 aa22.22■■□□□ 1.15
UBE3D-203ENST00000369747 CHL1O00533 1208 aa22.21■■□□□ 1.15
UBE3D-203ENST00000369747 TEFQ10587 303 aa22.21■■□□□ 1.15
UBE3D-203ENST00000369747 RGS17Q9UGC6 210 aaPredicted RBP22.21■■□□□ 1.15
UBE3D-203ENST00000369747 PDE3AQ14432 1141 aa22.21■■□□□ 1.15
UBE3D-203ENST00000369747 MARCH10Q8NA82 808 aaPredicted RBP22.21■■□□□ 1.15
UBE3D-203ENST00000369747 ONECUT3O60422 494 aaPredicted RBP22.2■■□□□ 1.14
UBE3D-203ENST00000369747 TAF7Q15545 349 aaPredicted RBP22.2■■□□□ 1.14
UBE3D-203ENST00000369747 KDM2BQ8NHM5 1336 aa22.2■■□□□ 1.14
UBE3D-203ENST00000369747 NFATC2IPQ8NCF5 419 aa22.19■■□□□ 1.14
UBE3D-203ENST00000369747 SLC52A2Q9HAB3 445 aa22.18■■□□□ 1.14
UBE3D-203ENST00000369747 TOGARAM1Q9Y4F4 1720 aa22.18■■□□□ 1.14
UBE3D-203ENST00000369747 SIPA1L3O60292 1781 aaPredicted RBP22.18■■□□□ 1.14
UBE3D-203ENST00000369747 SEPT12Q8IYM1 358 aa22.18■■□□□ 1.14
UBE3D-203ENST00000369747 TSPYL4Q9UJ04 414 aa22.18■■□□□ 1.14
UBE3D-203ENST00000369747 EXOSC9Q06265 439 aaKnown RBP22.17■■□□□ 1.14
UBE3D-203ENST00000369747 BTBD11A6QL63 1104 aa22.16■■□□□ 1.14
UBE3D-203ENST00000369747 CT47B1P0C2W7 299 aaPredicted RBP22.16■■□□□ 1.14
UBE3D-203ENST00000369747 CABP4P57796 275 aa22.16■■□□□ 1.14
UBE3D-203ENST00000369747 RBM6P78332 1123 aaKnown RBP22.16■■□□□ 1.14
UBE3D-203ENST00000369747 MRC1P22897 1456 aa22.15■■□□□ 1.14
UBE3D-203ENST00000369747 CANXP27824 592 aaKnown RBP22.15■■□□□ 1.14
UBE3D-203ENST00000369747 KAT6BQ8WYB5 2073 aa22.15■■□□□ 1.14
UBE3D-203ENST00000369747 ERVV-2B6SEH9 535 aa22.14■■□□□ 1.14
UBE3D-203ENST00000369747 TCERG1O14776 1098 aaKnown RBP22.14■■□□□ 1.14
UBE3D-203ENST00000369747 KRT24Q2M2I5 525 aa22.14■■□□□ 1.14
UBE3D-203ENST00000369747 FRAT1Q92837 279 aaPredicted RBP22.14■■□□□ 1.14
UBE3D-203ENST00000369747 KCNQ3O43525 872 aa22.14■■□□□ 1.13
UBE3D-203ENST00000369747 FAM182BQ5T319 152 aa22.14■■□□□ 1.13
UBE3D-203ENST00000369747 PANK1Q8TE04 598 aa22.14■■□□□ 1.13
UBE3D-203ENST00000369747 POTEAQ6S8J7 498 aa22.13■■□□□ 1.13
UBE3D-203ENST00000369747 CENPQQ7L2Z9 268 aaPredicted RBP22.13■■□□□ 1.13
UBE3D-203ENST00000369747 TSPYL6Q8N831 410 aa22.13■■□□□ 1.13
UBE3D-203ENST00000369747 C8orf58Q8NAV2 365 aa22.13■■□□□ 1.13
UBE3D-203ENST00000369747 BCL2L13Q9BXK5 485 aa22.13■■□□□ 1.13
UBE3D-203ENST00000369747 ELL2O00472 640 aaPredicted RBP22.12■■□□□ 1.13
UBE3D-203ENST00000369747 KDM3BQ7LBC6 1761 aa22.12■■□□□ 1.13
UBE3D-203ENST00000369747 SLC39A6Q13433 755 aa22.12■■□□□ 1.13
UBE3D-203ENST00000369747 BABAM1Q9NWV8 329 aa22.12■■□□□ 1.13
UBE3D-203ENST00000369747 DOT1LQ8TEK3 1739 aa22.1■■□□□ 1.13
UBE3D-203ENST00000369747 RXRBP28702 533 aa22.1■■□□□ 1.13
UBE3D-203ENST00000369747 COG6Q9Y2V7 657 aa22.1■■□□□ 1.13
UBE3D-203ENST00000369747 ITGB4P16144 1822 aa22.1■■□□□ 1.13
UBE3D-203ENST00000369747 PRIM1P49642 420 aaKnown RBP22.1■■□□□ 1.13
UBE3D-203ENST00000369747 SYTL4Q96C24 671 aaPredicted RBP22.1■■□□□ 1.13
UBE3D-203ENST00000369747 ACSBG1Q96GR2 724 aa22.1■■□□□ 1.13
UBE3D-203ENST00000369747 TMOD3Q9NYL9 352 aa22.09■■□□□ 1.13
UBE3D-203ENST00000369747 TNNQ9UQP3 1299 aa22.09■■□□□ 1.13
UBE3D-203ENST00000369747 BRWD3Q6RI45 1802 aa22.09■■□□□ 1.13
UBE3D-203ENST00000369747 ZNF790Q6PG37 636 aa22.08■■□□□ 1.13
UBE3D-203ENST00000369747 PIGBQ92521 554 aa22.08■■□□□ 1.13
UBE3D-203ENST00000369747 MS4A1P11836 297 aa22.08■■□□□ 1.12
UBE3D-203ENST00000369747 RLBP1P12271 317 aa22.08■■□□□ 1.12
UBE3D-203ENST00000369747 EIF4A1P60842 406 aaKnown RBP22.08■■□□□ 1.12
UBE3D-203ENST00000369747 SKAP1Q86WV1 359 aa22.08■■□□□ 1.12
UBE3D-203ENST00000369747 TWISTNBQ3B726 338 aaPredicted RBP22.07■■□□□ 1.12
UBE3D-203ENST00000369747 BCL9O00512 1426 aa22.06■■□□□ 1.12
UBE3D-203ENST00000369747 KCNQ2O43526 872 aa22.06■■□□□ 1.12
UBE3D-203ENST00000369747 VAMP4O75379 141 aa22.06■■□□□ 1.12
UBE3D-203ENST00000369747 CLUAP1Q96AJ1 413 aa22.06■■□□□ 1.12
UBE3D-203ENST00000369747 SSH1Q8WYL5 1049 aa22.04■■□□□ 1.12
UBE3D-203ENST00000369747 SMC4Q9NTJ3 1288 aa22.04■■□□□ 1.12
UBE3D-203ENST00000369747 KRT27Q7Z3Y8 459 aa22.04■■□□□ 1.12
UBE3D-203ENST00000369747 ASAP1Q9ULH1 1129 aa22.04■■□□□ 1.12
UBE3D-203ENST00000369747 ZKSCAN2Q63HK3 967 aa22.03■■□□□ 1.12
UBE3D-203ENST00000369747 TTC5Q8N0Z6 440 aa22.03■■□□□ 1.12
UBE3D-203ENST00000369747 ZNF496Q96IT1 587 aaPredicted RBP22.03■■□□□ 1.12
UBE3D-203ENST00000369747 RGS12O14924 1447 aa22.03■■□□□ 1.12
UBE3D-203ENST00000369747 PTF1AQ7RTS3 328 aa22.02■■□□□ 1.12
UBE3D-203ENST00000369747 MSH5O43196 834 aa22.02■■□□□ 1.11
UBE3D-203ENST00000369747 AAMPQ13685 434 aa22.02■■□□□ 1.11
UBE3D-203ENST00000369747 PAPPAQ13219 1627 aa22.01■■□□□ 1.11
UBE3D-203ENST00000369747 PRAMEF22A3QJZ6 481 aa22.01■■□□□ 1.11
UBE3D-203ENST00000369747 IGHDP01880 384 aa22.01■■□□□ 1.11
UBE3D-203ENST00000369747 ATG3Q9NT62 314 aa22.01■■□□□ 1.11
UBE3D-203ENST00000369747 HEG1Q9ULI3 1381 aa22.01■■□□□ 1.11
UBE3D-203ENST00000369747 PTCD1O75127 700 aaKnown RBP22■■□□□ 1.11
UBE3D-203ENST00000369747 PDE4AP27815 886 aa22■■□□□ 1.11
UBE3D-203ENST00000369747 GIGYF1O75420 1035 aaPredicted RBP22■■□□□ 1.11
UBE3D-203ENST00000369747 UBR2Q8IWV8 1755 aa21.99■■□□□ 1.11
UBE3D-203ENST00000369747 KCPQ6ZWJ8 1503 aa21.98■■□□□ 1.11
UBE3D-203ENST00000369747 DZIP1LQ8IYY4 767 aaKnown RBP21.98■■□□□ 1.11
UBE3D-203ENST00000369747 NECTIN2Q92692 538 aa21.98■■□□□ 1.11
UBE3D-203ENST00000369747 BACH2Q9BYV9 841 aa21.98■■□□□ 1.11
UBE3D-203ENST00000369747 TRIM27P14373 513 aa21.98■■□□□ 1.11
UBE3D-203ENST00000369747 MVPQ14764 893 aaKnown RBP21.98■■□□□ 1.11
UBE3D-203ENST00000369747 ALDH1L2Q3SY69 923 aa21.98■■□□□ 1.11
UBE3D-203ENST00000369747 FMNL2Q96PY5 1086 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms