RNA–Protein interactions for RNA: ENST00000369729.7

SFR1-202, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFR1, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-202ENST00000369729 TEFQ10587 303 aa11.47□□□□□ -0.57
SFR1-202ENST00000369729 BABAM1Q9NWV8 329 aa11.47□□□□□ -0.57
SFR1-202ENST00000369729 MEGF6O75095 1541 aa11.47□□□□□ -0.57
SFR1-202ENST00000369729 NRAPQ86VF7 1730 aa11.47□□□□□ -0.57
SFR1-202ENST00000369729 BCL9LQ86UU0 1499 aa11.47□□□□□ -0.57
SFR1-202ENST00000369729 PHKG2P15735 406 aa11.46□□□□□ -0.57
SFR1-202ENST00000369729 DDB1Q16531 1140 aa11.46□□□□□ -0.57
SFR1-202ENST00000369729 DCAF5Q96JK2 942 aa11.46□□□□□ -0.57
SFR1-202ENST00000369729 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.46□□□□□ -0.58
SFR1-202ENST00000369729 A0A0G2JS52 829 aa11.45□□□□□ -0.58
SFR1-202ENST00000369729 MYT1Q01538 1121 aa11.45□□□□□ -0.58
SFR1-202ENST00000369729 MCM10Q7L590 875 aa11.45□□□□□ -0.58
SFR1-202ENST00000369729 DDX54Q8TDD1 881 aaKnown RBP11.45□□□□□ -0.58
SFR1-202ENST00000369729 CFAP44Q96MT7 982 aa11.45□□□□□ -0.58
SFR1-202ENST00000369729 CHMP4AQ9BY43 222 aa11.45□□□□□ -0.58
SFR1-202ENST00000369729 LAS1LQ9Y4W2 734 aaKnown RBP11.45□□□□□ -0.58
SFR1-202ENST00000369729 RNMTO43148 476 aaKnown RBP11.45□□□□□ -0.58
SFR1-202ENST00000369729 CT47B1P0C2W7 299 aaPredicted RBP11.45□□□□□ -0.58
SFR1-202ENST00000369729 CLCN6P51797 869 aa11.45□□□□□ -0.58
SFR1-202ENST00000369729 TAF7Q15545 349 aaPredicted RBP11.45□□□□□ -0.58
SFR1-202ENST00000369729 ZNF579Q8NAF0 562 aaKnown RBP11.45□□□□□ -0.58
SFR1-202ENST00000369729 GJD4Q96KN9 370 aaPredicted RBP11.45□□□□□ -0.58
SFR1-202ENST00000369729 QTRT2Q9H974 415 aaKnown RBP11.45□□□□□ -0.58
SFR1-202ENST00000369729 DISP2A7MBM2 1401 aa11.44□□□□□ -0.58
SFR1-202ENST00000369729 MPRIPQ6WCQ1 1025 aa11.44□□□□□ -0.58
SFR1-202ENST00000369729 CDCA7LQ96GN5 454 aa11.44□□□□□ -0.58
SFR1-202ENST00000369729 ATRNO75882 1429 aa11.43□□□□□ -0.58
SFR1-202ENST00000369729 ERVV-2B6SEH9 535 aa11.43□□□□□ -0.58
SFR1-202ENST00000369729 DCTN1Q14203 1278 aa11.43□□□□□ -0.58
SFR1-202ENST00000369729 NKX1-1Q15270 411 aaPredicted RBP11.43□□□□□ -0.58
SFR1-202ENST00000369729 FAM98CQ17RN3 349 aaKnown RBP11.43□□□□□ -0.58
SFR1-202ENST00000369729 TRMT2AQ8IZ69 625 aaKnown RBP11.43□□□□□ -0.58
SFR1-202ENST00000369729 DCBLD2Q96PD2 775 aa11.43□□□□□ -0.58
SFR1-202ENST00000369729 PKD1L3Q7Z443 1732 aa11.43□□□□□ -0.58
SFR1-202ENST00000369729 TNS2Q63HR2 1409 aa11.42□□□□□ -0.58
SFR1-202ENST00000369729 CYP27B1O15528 508 aa11.42□□□□□ -0.58
SFR1-202ENST00000369729 CABP4P57796 275 aa11.42□□□□□ -0.58
SFR1-202ENST00000369729 DUSP27Q5VZP5 1158 aa11.42□□□□□ -0.58
SFR1-202ENST00000369729 IL17REQ8NFR9 667 aa11.42□□□□□ -0.58
SFR1-202ENST00000369729 THUMPD2Q9BTF0 503 aaKnown RBP11.42□□□□□ -0.58
SFR1-202ENST00000369729 TSPYL4Q9UJ04 414 aa11.42□□□□□ -0.58
SFR1-202ENST00000369729 CEMIPQ8WUJ3 1361 aa11.42□□□□□ -0.58
SFR1-202ENST00000369729 CHL1O00533 1208 aa11.41□□□□□ -0.58
SFR1-202ENST00000369729 ZNF853P0CG23 659 aa11.41□□□□□ -0.58
SFR1-202ENST00000369729 ZNF428Q96B54 188 aa11.41□□□□□ -0.58
SFR1-202ENST00000369729 FANCIQ9NVI1 1328 aa11.41□□□□□ -0.58
SFR1-202ENST00000369729 DLG5Q8TDM6 1919 aa11.41□□□□□ -0.58
SFR1-202ENST00000369729 BTBD11A6QL63 1104 aa11.4□□□□□ -0.58
SFR1-202ENST00000369729 RBM6P78332 1123 aaKnown RBP11.4□□□□□ -0.58
SFR1-202ENST00000369729 SLC52A2Q9HAB3 445 aa11.4□□□□□ -0.58
SFR1-202ENST00000369729 LGR6Q9HBX8 967 aa11.4□□□□□ -0.58
SFR1-202ENST00000369729 SOS1Q07889 1333 aaPredicted RBP11.4□□□□□ -0.58
SFR1-202ENST00000369729 TTC5Q8N0Z6 440 aa11.4□□□□□ -0.59
SFR1-202ENST00000369729 ONECUT3O60422 494 aaPredicted RBP11.39□□□□□ -0.59
SFR1-202ENST00000369729 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.39□□□□□ -0.59
SFR1-202ENST00000369729 TSR2Q969E8 191 aaKnown RBP11.39□□□□□ -0.59
SFR1-202ENST00000369729 MBIPQ9NS73 344 aa11.39□□□□□ -0.59
SFR1-202ENST00000369729 TMOD3Q9NYL9 352 aa11.39□□□□□ -0.59
SFR1-202ENST00000369729 RCAN3Q9UKA8 241 aa11.39□□□□□ -0.59
SFR1-202ENST00000369729 GALR2O43603 387 aaPredicted RBP11.38□□□□□ -0.59
SFR1-202ENST00000369729 RXRBP28702 533 aa11.38□□□□□ -0.59
SFR1-202ENST00000369729 WNK3Q9BYP7 1800 aa11.38□□□□□ -0.59
SFR1-202ENST00000369729 EXOSC9Q06265 439 aaKnown RBP11.37□□□□□ -0.59
SFR1-202ENST00000369729 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
SFR1-202ENST00000369729 NFATC2IPQ8NCF5 419 aa11.37□□□□□ -0.59
SFR1-202ENST00000369729 KDM6AO15550 1401 aaPredicted RBP11.36□□□□□ -0.59
SFR1-202ENST00000369729 NEFLP07196 543 aa11.36□□□□□ -0.59
SFR1-202ENST00000369729 LRRC37A3O60309 1634 aa11.36□□□□□ -0.59
SFR1-202ENST00000369729 HOXB7P09629 217 aa11.35□□□□□ -0.59
SFR1-202ENST00000369729 TWISTNBQ3B726 338 aaPredicted RBP11.35□□□□□ -0.59
SFR1-202ENST00000369729 ADAMTS7Q9UKP4 1686 aa11.35□□□□□ -0.59
SFR1-202ENST00000369729 MRC1P22897 1456 aa11.35□□□□□ -0.59
SFR1-202ENST00000369729 ALDH1L2Q3SY69 923 aa11.35□□□□□ -0.59
SFR1-202ENST00000369729 ZNF790Q6PG37 636 aa11.35□□□□□ -0.59
SFR1-202ENST00000369729 MARCH10Q8NA82 808 aaPredicted RBP11.35□□□□□ -0.59
SFR1-202ENST00000369729 SYTL4Q96C24 671 aaPredicted RBP11.35□□□□□ -0.59
SFR1-202ENST00000369729 FMNL2Q96PY5 1086 aa11.35□□□□□ -0.59
SFR1-202ENST00000369729 MIS18AQ9NYP9 233 aa11.35□□□□□ -0.59
SFR1-202ENST00000369729 SCN11AQ9UI33 1791 aa11.34□□□□□ -0.59
SFR1-202ENST00000369729 GLI3P10071 1580 aa11.34□□□□□ -0.59
SFR1-202ENST00000369729 HMGB2P26583 209 aaKnown RBP11.34□□□□□ -0.59
SFR1-202ENST00000369729 CANXP27824 592 aaKnown RBP11.34□□□□□ -0.59
SFR1-202ENST00000369729 THSD7AQ9UPZ6 1657 aa11.33□□□□□ -0.59
SFR1-202ENST00000369729 MS4A1P11836 297 aa11.33□□□□□ -0.6
SFR1-202ENST00000369729 EIF4A1P60842 406 aaKnown RBP11.33□□□□□ -0.6
SFR1-202ENST00000369729 CCDC30Q5VVM6 783 aa11.33□□□□□ -0.6
SFR1-202ENST00000369729 KRT27Q7Z3Y8 459 aa11.33□□□□□ -0.6
SFR1-202ENST00000369729 SMARCC1Q92922 1105 aaPredicted RBP11.33□□□□□ -0.6
SFR1-202ENST00000369729 STK31Q9BXU1 1019 aa11.33□□□□□ -0.6
SFR1-202ENST00000369729 SHANK3Q9BYB0 1731 aa11.32□□□□□ -0.6
SFR1-202ENST00000369729 IPO8O15397 1037 aaKnown RBP11.32□□□□□ -0.6
SFR1-202ENST00000369729 PRIM1P49642 420 aaKnown RBP11.32□□□□□ -0.6
SFR1-202ENST00000369729 FAM196AQ6ZSG2 479 aa11.32□□□□□ -0.6
SFR1-202ENST00000369729 TEX13AQ9BXU3 409 aaPredicted RBP11.32□□□□□ -0.6
SFR1-202ENST00000369729 SMC4Q9NTJ3 1288 aa11.32□□□□□ -0.6
SFR1-202ENST00000369729 SUPT16HQ9Y5B9 1047 aaKnown RBP11.32□□□□□ -0.6
SFR1-202ENST00000369729 BCL9O00512 1426 aa11.32□□□□□ -0.6
SFR1-202ENST00000369729 ELL2O00472 640 aaPredicted RBP11.31□□□□□ -0.6
SFR1-202ENST00000369729 VAMP4O75379 141 aa11.31□□□□□ -0.6
SFR1-202ENST00000369729 SNRPA1P09661 255 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms