RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 GDAP1L1Q96MZ0 367 aa9.09□□□□□ -0.95
UFL1-201ENST00000369278 DISP3Q9P2K9 1392 aa9.09□□□□□ -0.95
UFL1-201ENST00000369278 STX6O43752 255 aa9.09□□□□□ -0.95
UFL1-201ENST00000369278 GNG11P61952 73 aa9.09□□□□□ -0.95
UFL1-201ENST00000369278 HS1BP3Q53T59 392 aa9.09□□□□□ -0.95
UFL1-201ENST00000369278 ZNF397Q8NF99 534 aaPredicted RBP9.09□□□□□ -0.95
UFL1-201ENST00000369278 CPLX1O14810 134 aa9.08□□□□□ -0.96
UFL1-201ENST00000369278 MLECQ14165 292 aa9.08□□□□□ -0.96
UFL1-201ENST00000369278 FEZ1Q99689 392 aa9.08□□□□□ -0.96
UFL1-201ENST00000369278 HDAC5Q9UQL6 1122 aa9.08□□□□□ -0.96
UFL1-201ENST00000369278 GJB2P29033 226 aa9.08□□□□□ -0.96
UFL1-201ENST00000369278 ZNF445P59923 1031 aa9.08□□□□□ -0.96
UFL1-201ENST00000369278 UGGT2Q9NYU1 1516 aa9.08□□□□□ -0.96
UFL1-201ENST00000369278 PUF60Q9UHX1 559 aaKnown RBP9.08□□□□□ -0.96
UFL1-201ENST00000369278 LOC102724159A0A0B4J2E5 919 aa9.08□□□□□ -0.96
UFL1-201ENST00000369278 SLU7O95391 586 aaKnown RBP9.08□□□□□ -0.96
UFL1-201ENST00000369278 TMPOP42166 694 aaKnown RBP9.08□□□□□ -0.96
UFL1-201ENST00000369278 PWP2Q15269 919 aaKnown RBP9.08□□□□□ -0.96
UFL1-201ENST00000369278 TTC31Q49AM3 519 aaPredicted RBP9.08□□□□□ -0.96
UFL1-201ENST00000369278 BANK1Q8NDB2 785 aa9.08□□□□□ -0.96
UFL1-201ENST00000369278 SNX21Q969T3 373 aa9.08□□□□□ -0.96
UFL1-201ENST00000369278 KIAA0754O94854 1291 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 STK38Q15208 465 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 CEP57Q86XR8 500 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 LRRC2Q9BYS8 371 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 PDRG1Q9NUG6 133 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 RAI14Q9P0K7 980 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 MX1P20591 662 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 CALRP27797 417 aaKnown RBP9.07□□□□□ -0.96
UFL1-201ENST00000369278 TERF1P54274 439 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 HNRNPH2P55795 449 aaKnown RBP9.07□□□□□ -0.96
UFL1-201ENST00000369278 NUCB1Q02818 461 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 ZCCHC17Q9NP64 241 aaKnown RBP9.07□□□□□ -0.96
UFL1-201ENST00000369278 SUPT6HQ7KZ85 1726 aaKnown RBP9.07□□□□□ -0.96
UFL1-201ENST00000369278 CCDC69A6NI79 296 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 SYNE3Q6ZMZ3 975 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 FBXO3Q9UK99 471 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 NCOA3Q9Y6Q9 1424 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 GPRASP1Q5JY77 1395 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 TDO2P48775 406 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 AIMP1Q12904 312 aaKnown RBP9.07□□□□□ -0.96
UFL1-201ENST00000369278 KARSQ15046 597 aaKnown RBP9.07□□□□□ -0.96
UFL1-201ENST00000369278 KIF4BQ2VIQ3 1234 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 KLHL10Q6JEL2 608 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 FSD1Q9BTV5 496 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 CYP46A1Q9Y6A2 500 aa9.07□□□□□ -0.96
UFL1-201ENST00000369278 PZPP20742 1482 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 SEC31AO94979 1220 aaKnown RBP9.06□□□□□ -0.96
UFL1-201ENST00000369278 CLSTN1O94985 981 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 RHOXF2BP0C7M4 288 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 MCM2P49736 904 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 JAKMIP3Q5VZ66 844 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 CEP57L1Q8IYX8 460 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 RHOXF2Q9BQY4 288 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 NAT10Q9H0A0 1025 aaKnown RBP9.06□□□□□ -0.96
UFL1-201ENST00000369278 C9orf78Q9NZ63 289 aaPredicted RBP9.06□□□□□ -0.96
UFL1-201ENST00000369278 ARHGEF11O15085 1522 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 FRMD3A2A2Y4 597 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 FAM83GA6ND36 823 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 SMTNL1A8MU46 457 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 LMOD1P29536 600 aaPredicted RBP9.06□□□□□ -0.96
UFL1-201ENST00000369278 TYRO3Q06418 890 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 GPATCH3Q96I76 525 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 LRRCC1Q9C099 1032 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 ACBD3Q9H3P7 528 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 CDR1P51861 262 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 UBE2HP62256 183 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 KRT24Q2M2I5 525 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 ESF1Q9H501 851 aaKnown RBP9.06□□□□□ -0.96
UFL1-201ENST00000369278 TSPYL4Q9UJ04 414 aa9.06□□□□□ -0.96
UFL1-201ENST00000369278 MATR3P43243 847 aaKnown RBP eCLIP9.05□□□□□ -0.96
UFL1-201ENST00000369278 TEFQ10587 303 aa9.05□□□□□ -0.96
UFL1-201ENST00000369278 TSR1Q2NL82 804 aaKnown RBP9.05□□□□□ -0.96
UFL1-201ENST00000369278 SRCIN1Q9C0H9 1055 aa9.05□□□□□ -0.96
UFL1-201ENST00000369278 SPAG9O60271 1321 aaKnown RBP9.05□□□□□ -0.96
UFL1-201ENST00000369278 ZSCAN26Q16670 478 aa9.05□□□□□ -0.96
UFL1-201ENST00000369278 WDR63Q8IWG1 891 aa9.05□□□□□ -0.96
UFL1-201ENST00000369278 CARD6Q9BX69 1037 aa9.05□□□□□ -0.96
UFL1-201ENST00000369278 FAM160A1Q05DH4 1040 aa9.05□□□□□ -0.96
UFL1-201ENST00000369278 AOPEPQ8N6M6 819 aa9.05□□□□□ -0.96
UFL1-201ENST00000369278 FAM200AQ8TCP9 573 aa9.05□□□□□ -0.96
UFL1-201ENST00000369278 RUFY2Q8WXA3 655 aa9.05□□□□□ -0.96
UFL1-201ENST00000369278 DNAJC5BQ9UF47 199 aa9.05□□□□□ -0.96
UFL1-201ENST00000369278 PAXBP1Q9Y5B6 917 aa9.05□□□□□ -0.96
UFL1-201ENST00000369278 CTTNBP2Q8WZ74 1663 aa9.05□□□□□ -0.96
UFL1-201ENST00000369278 TRIM66O15016 1216 aa9.04□□□□□ -0.96
UFL1-201ENST00000369278 GNAI1P63096 354 aa9.04□□□□□ -0.96
UFL1-201ENST00000369278 CCT2P78371 535 aaKnown RBP9.04□□□□□ -0.96
UFL1-201ENST00000369278 CCDC12Q8WUD4 166 aaPredicted RBP9.04□□□□□ -0.96
UFL1-201ENST00000369278 ARFGAP3Q9NP61 516 aa9.04□□□□□ -0.96
UFL1-201ENST00000369278 TCOF1Q13428 1488 aaKnown RBP9.04□□□□□ -0.96
UFL1-201ENST00000369278 TPM1P09493 284 aa9.04□□□□□ -0.96
UFL1-201ENST00000369278 UBTFL1P0CB47 393 aaPredicted RBP9.04□□□□□ -0.96
UFL1-201ENST00000369278 ARID5BQ14865 1188 aa9.04□□□□□ -0.96
UFL1-201ENST00000369278 TXLNBQ8N3L3 684 aa9.04□□□□□ -0.96
UFL1-201ENST00000369278 OAS2P29728 719 aaKnown RBP9.04□□□□□ -0.96
UFL1-201ENST00000369278 GABPB1Q06547 395 aaPredicted RBP9.04□□□□□ -0.96
UFL1-201ENST00000369278 SMARCC1Q92922 1105 aaPredicted RBP9.04□□□□□ -0.96
UFL1-201ENST00000369278 FAM212AQ96EL1 285 aa9.04□□□□□ -0.96
UFL1-201ENST00000369278 EPC1Q9H2F5 836 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms