RNA–Protein interactions for RNA: ENST00000368902.1

SCNM1-201, Transcript of sodium channel modifier 1, humanhuman

TSL 2 BASIC

Gene SCNM1, Length 869 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-201ENST00000368902 CICQ96RK0 1608 aaPredicted RBP11.85□□□□□ -0.51
SCNM1-201ENST00000368902 UBR3Q6ZT12 1888 aa11.85□□□□□ -0.51
SCNM1-201ENST00000368902 IGSF1Q8N6C5 1336 aa11.85□□□□□ -0.51
SCNM1-201ENST00000368902 PLEKHO1Q53GL0 409 aaPredicted RBP11.84□□□□□ -0.51
SCNM1-201ENST00000368902 SULT6B1Q6IMI4 303 aa11.84□□□□□ -0.51
SCNM1-201ENST00000368902 ZNF526Q8TF50 670 aaPredicted RBP11.84□□□□□ -0.51
SCNM1-201ENST00000368902 DIAPH1O60610 1272 aaKnown RBP11.83□□□□□ -0.52
SCNM1-201ENST00000368902 PHF14O94880 888 aa11.83□□□□□ -0.52
SCNM1-201ENST00000368902 NKX1-1Q15270 411 aaPredicted RBP11.83□□□□□ -0.52
SCNM1-201ENST00000368902 AEBP1Q8IUX7 1158 aa11.83□□□□□ -0.52
SCNM1-201ENST00000368902 IFNL2Q8IZJ0 200 aa11.83□□□□□ -0.52
SCNM1-201ENST00000368902 NCAPD2Q15021 1401 aa11.83□□□□□ -0.52
SCNM1-201ENST00000368902 ANKRD26Q9UPS8 1709 aa11.83□□□□□ -0.52
SCNM1-201ENST00000368902 PHKG2P15735 406 aa11.82□□□□□ -0.52
SCNM1-201ENST00000368902 AMOTQ4VCS5 1084 aa11.82□□□□□ -0.52
SCNM1-201ENST00000368902 MPRIPQ6WCQ1 1025 aa11.82□□□□□ -0.52
SCNM1-201ENST00000368902 WWC3Q9ULE0 1092 aa11.82□□□□□ -0.52
SCNM1-201ENST00000368902 HSPA6P17066 643 aa11.81□□□□□ -0.52
SCNM1-201ENST00000368902 AMIGO3Q86WK7 504 aa11.81□□□□□ -0.52
SCNM1-201ENST00000368902 MAP2P11137 1827 aaKnown RBP11.81□□□□□ -0.52
SCNM1-201ENST00000368902 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.8□□□□□ -0.52
SCNM1-201ENST00000368902 HSP90AB1P08238 724 aaKnown RBP11.8□□□□□ -0.52
SCNM1-201ENST00000368902 HMOX1P09601 288 aa11.8□□□□□ -0.52
SCNM1-201ENST00000368902 PPP2R1AP30153 589 aa11.8□□□□□ -0.52
SCNM1-201ENST00000368902 DDX10Q13206 875 aaKnown RBP11.8□□□□□ -0.52
SCNM1-201ENST00000368902 CFAP53Q96M91 514 aa11.8□□□□□ -0.52
SCNM1-201ENST00000368902 PLEKHG2Q9H7P9 1386 aa11.79□□□□□ -0.52
SCNM1-201ENST00000368902 PXDNLA1KZ92 1463 aa11.79□□□□□ -0.52
SCNM1-201ENST00000368902 U2SURPO15042 1029 aaKnown RBP11.79□□□□□ -0.52
SCNM1-201ENST00000368902 SSFA2P28290 1259 aa11.79□□□□□ -0.52
SCNM1-201ENST00000368902 ZNF530Q6P9A1 599 aaPredicted RBP11.79□□□□□ -0.52
SCNM1-201ENST00000368902 C1orf141Q5JVX7 400 aa11.78□□□□□ -0.52
SCNM1-201ENST00000368902 PIGBQ92521 554 aa11.78□□□□□ -0.52
SCNM1-201ENST00000368902 TMOD3Q9NYL9 352 aa11.78□□□□□ -0.52
SCNM1-201ENST00000368902 KIAA1551Q9HCM1 1747 aa11.77□□□□□ -0.52
SCNM1-201ENST00000368902 ERVV-2B6SEH9 535 aa11.77□□□□□ -0.53
SCNM1-201ENST00000368902 GNPATO15228 680 aa11.77□□□□□ -0.53
SCNM1-201ENST00000368902 SMIM5Q71RC9 77 aa11.77□□□□□ -0.53
SCNM1-201ENST00000368902 LINC00116Q8NCU8 138 aa11.77□□□□□ -0.53
SCNM1-201ENST00000368902 DCAF5Q96JK2 942 aa11.77□□□□□ -0.53
SCNM1-201ENST00000368902 NUDCQ9Y266 331 aa11.77□□□□□ -0.53
SCNM1-201ENST00000368902 KDRP35968 1356 aa11.77□□□□□ -0.53
SCNM1-201ENST00000368902 C10orf71Q711Q0 1435 aa11.77□□□□□ -0.53
SCNM1-201ENST00000368902 ZNF831Q5JPB2 1677 aa11.76□□□□□ -0.53
SCNM1-201ENST00000368902 LOC102724428A0A0B4J2F2 783 aa11.76□□□□□ -0.53
SCNM1-201ENST00000368902 SIK1P57059 783 aa11.76□□□□□ -0.53
SCNM1-201ENST00000368902 KIF13BQ9NQT8 1826 aa11.76□□□□□ -0.53
SCNM1-201ENST00000368902 CABP4P57796 275 aa11.75□□□□□ -0.53
SCNM1-201ENST00000368902 KIF3CO14782 793 aa11.74□□□□□ -0.53
SCNM1-201ENST00000368902 MMP10P09238 476 aa11.74□□□□□ -0.53
SCNM1-201ENST00000368902 ITPK1Q13572 414 aa11.74□□□□□ -0.53
SCNM1-201ENST00000368902 RALBP1Q15311 655 aa11.74□□□□□ -0.53
SCNM1-201ENST00000368902 MTHFSDQ2M296 383 aaKnown RBP11.74□□□□□ -0.53
SCNM1-201ENST00000368902 AKAP4Q5JQC9 854 aa11.74□□□□□ -0.53
SCNM1-201ENST00000368902 ASAP1Q9ULH1 1129 aa11.74□□□□□ -0.53
SCNM1-201ENST00000368902 C4AP0C0L4 1744 aa11.74□□□□□ -0.53
SCNM1-201ENST00000368902 U2AF1L5P0DN76 240 aaPredicted RBP11.73□□□□□ -0.53
SCNM1-201ENST00000368902 COL5A3P25940 1745 aaPredicted RBP11.73□□□□□ -0.53
SCNM1-201ENST00000368902 U2AF1Q01081 240 aaKnown RBP eCLIP11.73□□□□□ -0.53
SCNM1-201ENST00000368902 ATG3Q9NT62 314 aa11.73□□□□□ -0.53
SCNM1-201ENST00000368902 N4BP2Q86UW6 1770 aaPredicted RBP11.72□□□□□ -0.53
SCNM1-201ENST00000368902 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
SCNM1-201ENST00000368902 NFATC2IPQ8NCF5 419 aa11.72□□□□□ -0.53
SCNM1-201ENST00000368902 RNMTO43148 476 aaKnown RBP11.71□□□□□ -0.53
SCNM1-201ENST00000368902 FCHSD2O94868 740 aa11.71□□□□□ -0.53
SCNM1-201ENST00000368902 PRKAR2BP31323 418 aa11.71□□□□□ -0.53
SCNM1-201ENST00000368902 APLP1P51693 650 aa11.71□□□□□ -0.53
SCNM1-201ENST00000368902 GAS2L2Q8NHY3 880 aa11.71□□□□□ -0.53
SCNM1-201ENST00000368902 LGR6Q9HBX8 967 aa11.71□□□□□ -0.53
SCNM1-201ENST00000368902 BCS1LQ9Y276 419 aa11.71□□□□□ -0.53
SCNM1-201ENST00000368902 BRCA1P38398 1863 aaKnown RBP11.7□□□□□ -0.54
SCNM1-201ENST00000368902 WDR90Q96KV7 1748 aa11.7□□□□□ -0.54
SCNM1-201ENST00000368902 TGFB2P61812 414 aa11.7□□□□□ -0.54
SCNM1-201ENST00000368902 RC3H1Q5TC82 1133 aaKnown RBP11.7□□□□□ -0.54
SCNM1-201ENST00000368902 NLGN1Q8N2Q7 840 aa11.7□□□□□ -0.54
SCNM1-201ENST00000368902 RSPH6AQ9H0K4 717 aa11.7□□□□□ -0.54
SCNM1-201ENST00000368902 COL3A1P02461 1466 aaPredicted RBP11.7□□□□□ -0.54
SCNM1-201ENST00000368902 TRAPPC3LQ5T215 181 aa11.69□□□□□ -0.54
SCNM1-201ENST00000368902 PHACTR3Q96KR7 559 aa11.69□□□□□ -0.54
SCNM1-201ENST00000368902 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
SCNM1-201ENST00000368902 RTCBQ9Y3I0 505 aaKnown RBP11.69□□□□□ -0.54
SCNM1-201ENST00000368902 KDM6AO15550 1401 aaPredicted RBP11.69□□□□□ -0.54
SCNM1-201ENST00000368902 CNTNAP4Q9C0A0 1308 aa11.68□□□□□ -0.54
SCNM1-201ENST00000368902 GNAT3A8MTJ3 354 aa11.68□□□□□ -0.54
SCNM1-201ENST00000368902 TOMM70O94826 608 aa11.68□□□□□ -0.54
SCNM1-201ENST00000368902 SLC52A2Q9HAB3 445 aa11.68□□□□□ -0.54
SCNM1-201ENST00000368902 CCDC87Q9NVE4 849 aa11.68□□□□□ -0.54
SCNM1-201ENST00000368902 A0A0G2JLW4 131 aa11.67□□□□□ -0.54
SCNM1-201ENST00000368902 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
SCNM1-201ENST00000368902 PTCD1O75127 700 aaKnown RBP11.67□□□□□ -0.54
SCNM1-201ENST00000368902 NMRK2Q9NPI5 230 aa11.67□□□□□ -0.54
SCNM1-201ENST00000368902 ARFGEF1Q9Y6D6 1849 aa11.67□□□□□ -0.54
SCNM1-201ENST00000368902 NEFMP07197 916 aa11.66□□□□□ -0.54
SCNM1-201ENST00000368902 DPEP1P16444 411 aa11.66□□□□□ -0.54
SCNM1-201ENST00000368902 ARHGAP27Q6ZUM4 889 aa11.66□□□□□ -0.54
SCNM1-201ENST00000368902 IL17REQ8NFR9 667 aa11.66□□□□□ -0.54
SCNM1-201ENST00000368902 CNKSR2Q8WXI2 1034 aa11.66□□□□□ -0.54
SCNM1-201ENST00000368902 SLC4A9Q96Q91 983 aa11.66□□□□□ -0.54
SCNM1-201ENST00000368902 TJP1Q07157 1748 aa11.66□□□□□ -0.54
SCNM1-201ENST00000368902 KCPQ6ZWJ8 1503 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms