RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 MIS18AQ9NYP9 233 aa15.88■□□□□ 0.13
TUBE1-202ENST00000368662 GLI3P10071 1580 aa15.88■□□□□ 0.13
TUBE1-202ENST00000368662 NFATC2IPQ8NCF5 419 aa15.88■□□□□ 0.13
TUBE1-202ENST00000368662 SIPA1L3O60292 1781 aaPredicted RBP15.87■□□□□ 0.13
TUBE1-202ENST00000368662 ONECUT3O60422 494 aaPredicted RBP15.87■□□□□ 0.13
TUBE1-202ENST00000368662 TWISTNBQ3B726 338 aaPredicted RBP15.87■□□□□ 0.13
TUBE1-202ENST00000368662 THSD7AQ9UPZ6 1657 aa15.87■□□□□ 0.13
TUBE1-202ENST00000368662 RNF123Q5XPI4 1314 aa15.87■□□□□ 0.13
TUBE1-202ENST00000368662 A0A0G2JS52 829 aa15.86■□□□□ 0.13
TUBE1-202ENST00000368662 MYT1Q01538 1121 aa15.86■□□□□ 0.13
TUBE1-202ENST00000368662 KDM3BQ7LBC6 1761 aa15.86■□□□□ 0.13
TUBE1-202ENST00000368662 RARSP54136 660 aaKnown RBP15.86■□□□□ 0.13
TUBE1-202ENST00000368662 CHMP4AQ9BY43 222 aa15.86■□□□□ 0.13
TUBE1-202ENST00000368662 VAMP4O75379 141 aa15.85■□□□□ 0.13
TUBE1-202ENST00000368662 ALDH1L2Q3SY69 923 aa15.85■□□□□ 0.13
TUBE1-202ENST00000368662 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.85■□□□□ 0.13
TUBE1-202ENST00000368662 C8orf58Q8NAV2 365 aa15.85■□□□□ 0.13
TUBE1-202ENST00000368662 NEFLP07196 543 aa15.85■□□□□ 0.13
TUBE1-202ENST00000368662 ZNF790Q6PG37 636 aa15.84■□□□□ 0.13
TUBE1-202ENST00000368662 TTC5Q8N0Z6 440 aa15.84■□□□□ 0.13
TUBE1-202ENST00000368662 MARCH10Q8NA82 808 aaPredicted RBP15.84■□□□□ 0.13
TUBE1-202ENST00000368662 TMOD3Q9NYL9 352 aa15.84■□□□□ 0.13
TUBE1-202ENST00000368662 HOXB7P09629 217 aa15.83■□□□□ 0.13
TUBE1-202ENST00000368662 RRP1P56182 461 aaKnown RBP15.83■□□□□ 0.13
TUBE1-202ENST00000368662 EIF4A1P60842 406 aaKnown RBP15.83■□□□□ 0.13
TUBE1-202ENST00000368662 TSPYL6Q8N831 410 aa15.83■□□□□ 0.13
TUBE1-202ENST00000368662 ELL2O00472 640 aaPredicted RBP15.83■□□□□ 0.12
TUBE1-202ENST00000368662 RBM6P78332 1123 aaKnown RBP15.82■□□□□ 0.12
TUBE1-202ENST00000368662 TOGARAM1Q9Y4F4 1720 aa15.82■□□□□ 0.12
TUBE1-202ENST00000368662 SMC4Q9NTJ3 1288 aa15.82■□□□□ 0.12
TUBE1-202ENST00000368662 BCAR3O75815 825 aa15.81■□□□□ 0.12
TUBE1-202ENST00000368662 BRPF1P55201 1214 aaPredicted RBP15.8■□□□□ 0.12
TUBE1-202ENST00000368662 KRT24Q2M2I5 525 aa15.8■□□□□ 0.12
TUBE1-202ENST00000368662 SEPT12Q8IYM1 358 aa15.8■□□□□ 0.12
TUBE1-202ENST00000368662 SSH1Q8WYL5 1049 aa15.8■□□□□ 0.12
TUBE1-202ENST00000368662 HEG1Q9ULI3 1381 aa15.8■□□□□ 0.12
TUBE1-202ENST00000368662 KIF16BQ96L93 1317 aa15.8■□□□□ 0.12
TUBE1-202ENST00000368662 BCL9O00512 1426 aa15.79■□□□□ 0.12
TUBE1-202ENST00000368662 KCNQ3O43525 872 aa15.79■□□□□ 0.12
TUBE1-202ENST00000368662 SLC39A6Q13433 755 aa15.79■□□□□ 0.12
TUBE1-202ENST00000368662 FMNL2Q96PY5 1086 aa15.79■□□□□ 0.12
TUBE1-202ENST00000368662 CCDC30Q5VVM6 783 aa15.79■□□□□ 0.12
TUBE1-202ENST00000368662 PIGBQ92521 554 aa15.79■□□□□ 0.12
TUBE1-202ENST00000368662 CANXP27824 592 aaKnown RBP15.78■□□□□ 0.12
TUBE1-202ENST00000368662 SYTL4Q96C24 671 aaPredicted RBP15.78■□□□□ 0.12
TUBE1-202ENST00000368662 DOT1LQ8TEK3 1739 aa15.78■□□□□ 0.12
TUBE1-202ENST00000368662 PAPPAQ13219 1627 aa15.78■□□□□ 0.12
TUBE1-202ENST00000368662 GIGYF1O75420 1035 aaPredicted RBP15.77■□□□□ 0.12
TUBE1-202ENST00000368662 BCL2L13Q9BXK5 485 aa15.77■□□□□ 0.12
TUBE1-202ENST00000368662 ITGB4P16144 1822 aa15.77■□□□□ 0.12
TUBE1-202ENST00000368662 IPO8O15397 1037 aaKnown RBP15.77■□□□□ 0.11
TUBE1-202ENST00000368662 RXRBP28702 533 aa15.77■□□□□ 0.11
TUBE1-202ENST00000368662 PRIM1P49642 420 aaKnown RBP15.77■□□□□ 0.11
TUBE1-202ENST00000368662 ZNF496Q96IT1 587 aaPredicted RBP15.77■□□□□ 0.11
TUBE1-202ENST00000368662 STK31Q9BXU1 1019 aa15.77■□□□□ 0.11
TUBE1-202ENST00000368662 SNRPA1P09661 255 aaKnown RBP15.76■□□□□ 0.11
TUBE1-202ENST00000368662 HDGFL1Q5TGJ6 251 aa15.76■□□□□ 0.11
TUBE1-202ENST00000368662 MS4A1P11836 297 aa15.76■□□□□ 0.11
TUBE1-202ENST00000368662 MRPL50Q8N5N7 158 aaKnown RBP15.76■□□□□ 0.11
TUBE1-202ENST00000368662 FRAT1Q92837 279 aaPredicted RBP15.76■□□□□ 0.11
TUBE1-202ENST00000368662 ZKSCAN2Q63HK3 967 aa15.75■□□□□ 0.11
TUBE1-202ENST00000368662 KAT6BQ8WYB5 2073 aa15.75■□□□□ 0.11
TUBE1-202ENST00000368662 UBR2Q8IWV8 1755 aa15.75■□□□□ 0.11
TUBE1-202ENST00000368662 PLIN1O60240 522 aa15.74■□□□□ 0.11
TUBE1-202ENST00000368662 ACSBG1Q96GR2 724 aa15.74■□□□□ 0.11
TUBE1-202ENST00000368662 GTF3C3Q9Y5Q9 886 aa15.74■□□□□ 0.11
TUBE1-202ENST00000368662 PDE3AQ14432 1141 aa15.74■□□□□ 0.11
TUBE1-202ENST00000368662 ERICH6BQ5W0A0 696 aa15.74■□□□□ 0.11
TUBE1-202ENST00000368662 KRT27Q7Z3Y8 459 aa15.74■□□□□ 0.11
TUBE1-202ENST00000368662 VSIG10Q8N0Z9 540 aa15.74■□□□□ 0.11
TUBE1-202ENST00000368662 ARHGAP45Q92619 1136 aa15.74■□□□□ 0.11
TUBE1-202ENST00000368662 ATG3Q9NT62 314 aa15.74■□□□□ 0.11
TUBE1-202ENST00000368662 KCPQ6ZWJ8 1503 aa15.74■□□□□ 0.11
TUBE1-202ENST00000368662 RGS17Q9UGC6 210 aaPredicted RBP15.73■□□□□ 0.11
TUBE1-202ENST00000368662 ASAP1Q9ULH1 1129 aa15.73■□□□□ 0.11
TUBE1-202ENST00000368662 SLC4A2P04920 1241 aa15.73■□□□□ 0.11
TUBE1-202ENST00000368662 EIF2S2P20042 333 aaKnown RBP15.73■□□□□ 0.11
TUBE1-202ENST00000368662 FKBP8Q14318 412 aa15.73■□□□□ 0.11
TUBE1-202ENST00000368662 TEX13AQ9BXU3 409 aaPredicted RBP15.73■□□□□ 0.11
TUBE1-202ENST00000368662 NOB1Q9ULX3 412 aaKnown RBP15.73■□□□□ 0.11
TUBE1-202ENST00000368662 ATF7IPQ6VMQ6 1270 aa15.72■□□□□ 0.11
TUBE1-202ENST00000368662 SMARCC1Q92922 1105 aaPredicted RBP15.72■□□□□ 0.11
TUBE1-202ENST00000368662 DBF4Q9UBU7 674 aaPredicted RBP15.72■□□□□ 0.11
TUBE1-202ENST00000368662 CACNA1FO60840 1977 aa15.72■□□□□ 0.11
TUBE1-202ENST00000368662 PTPRCP08575 1304 aa15.72■□□□□ 0.11
TUBE1-202ENST00000368662 TCERG1O14776 1098 aaKnown RBP15.71■□□□□ 0.11
TUBE1-202ENST00000368662 PTCD1O75127 700 aaKnown RBP15.71■□□□□ 0.11
TUBE1-202ENST00000368662 FAM196AQ6ZSG2 479 aa15.71■□□□□ 0.11
TUBE1-202ENST00000368662 FTSJ3Q8IY81 847 aaKnown RBP15.7■□□□□ 0.1
TUBE1-202ENST00000368662 API5Q9BZZ5 524 aaKnown RBP15.7■□□□□ 0.1
TUBE1-202ENST00000368662 NHSQ6T4R5 1651 aa15.7■□□□□ 0.1
TUBE1-202ENST00000368662 IRX6P78412 446 aaPredicted RBP15.7■□□□□ 0.1
TUBE1-202ENST00000368662 NECTIN2Q92692 538 aa15.7■□□□□ 0.1
TUBE1-202ENST00000368662 ERBB4Q15303 1308 aa15.69■□□□□ 0.1
TUBE1-202ENST00000368662 PRAMEF22A3QJZ6 481 aa15.69■□□□□ 0.1
TUBE1-202ENST00000368662 KCNQ2O43526 872 aa15.69■□□□□ 0.1
TUBE1-202ENST00000368662 TRIM27P14373 513 aa15.69■□□□□ 0.1
TUBE1-202ENST00000368662 POTEAQ6S8J7 498 aa15.69■□□□□ 0.1
TUBE1-202ENST00000368662 DZIP1LQ8IYY4 767 aaKnown RBP15.69■□□□□ 0.1
TUBE1-202ENST00000368662 RBM42Q9BTD8 480 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms