RNA–Protein interactions for RNA: ENST00000368356.8

FDPS-202, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 2 BASIC

Gene FDPS, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-202ENST00000368356 IL17REQ8NFR9 667 aa20.56■□□□□ 0.88
FDPS-202ENST00000368356 CEMIPQ8WUJ3 1361 aa20.56■□□□□ 0.88
FDPS-202ENST00000368356 KCNQ2O43526 872 aa20.55■□□□□ 0.88
FDPS-202ENST00000368356 HSP90AB1P08238 724 aaKnown RBP20.55■□□□□ 0.88
FDPS-202ENST00000368356 DCTN1Q14203 1278 aa20.55■□□□□ 0.88
FDPS-202ENST00000368356 NKX1-1Q15270 411 aaPredicted RBP20.55■□□□□ 0.88
FDPS-202ENST00000368356 MCM10Q7L590 875 aa20.55■□□□□ 0.88
FDPS-202ENST00000368356 PTF1AQ7RTS3 328 aa20.55■□□□□ 0.88
FDPS-202ENST00000368356 SLFN5Q08AF3 891 aa20.54■□□□□ 0.88
FDPS-202ENST00000368356 CDCA7LQ96GN5 454 aa20.54■□□□□ 0.88
FDPS-202ENST00000368356 TOGARAM1Q9Y4F4 1720 aa20.54■□□□□ 0.88
FDPS-202ENST00000368356 SIPA1L3O60292 1781 aaPredicted RBP20.54■□□□□ 0.88
FDPS-202ENST00000368356 TRMT2AQ8IZ69 625 aaKnown RBP20.53■□□□□ 0.88
FDPS-202ENST00000368356 THUMPD2Q9BTF0 503 aaKnown RBP20.53■□□□□ 0.88
FDPS-202ENST00000368356 E9PSI1 815 aa20.53■□□□□ 0.88
FDPS-202ENST00000368356 RNMTO43148 476 aaKnown RBP20.53■□□□□ 0.88
FDPS-202ENST00000368356 MPRIPQ6WCQ1 1025 aa20.53■□□□□ 0.88
FDPS-202ENST00000368356 SYTL4Q96C24 671 aaPredicted RBP20.53■□□□□ 0.88
FDPS-202ENST00000368356 DCAF5Q96JK2 942 aa20.53■□□□□ 0.88
FDPS-202ENST00000368356 LGR6Q9HBX8 967 aa20.53■□□□□ 0.88
FDPS-202ENST00000368356 SPINK5Q9NQ38 1064 aaPredicted RBP20.53■□□□□ 0.88
FDPS-202ENST00000368356 KDM6AO15550 1401 aaPredicted RBP20.52■□□□□ 0.88
FDPS-202ENST00000368356 ITGB4P16144 1822 aa20.52■□□□□ 0.87
FDPS-202ENST00000368356 ZNF853P0CG23 659 aa20.51■□□□□ 0.87
FDPS-202ENST00000368356 PRIM1P49642 420 aaKnown RBP20.5■□□□□ 0.87
FDPS-202ENST00000368356 CFAP44Q96MT7 982 aa20.5■□□□□ 0.87
FDPS-202ENST00000368356 IFT57Q9NWB7 429 aa20.5■□□□□ 0.87
FDPS-202ENST00000368356 GNAI1P63096 354 aa20.49■□□□□ 0.87
FDPS-202ENST00000368356 DUSP27Q5VZP5 1158 aa20.49■□□□□ 0.87
FDPS-202ENST00000368356 MRC1P22897 1456 aa20.49■□□□□ 0.87
FDPS-202ENST00000368356 CENPBP07199 599 aaPredicted RBP20.48■□□□□ 0.87
FDPS-202ENST00000368356 MYH16Q9H6N6 1097 aa20.48■□□□□ 0.87
FDPS-202ENST00000368356 LY75O60449 1722 aa20.47■□□□□ 0.87
FDPS-202ENST00000368356 CHL1O00533 1208 aa20.47■□□□□ 0.87
FDPS-202ENST00000368356 TAF7Q15545 349 aaPredicted RBP20.47■□□□□ 0.87
FDPS-202ENST00000368356 BABAM1Q9NWV8 329 aa20.47■□□□□ 0.87
FDPS-202ENST00000368356 TEFQ10587 303 aa20.46■□□□□ 0.87
FDPS-202ENST00000368356 TXNRD1Q16881 649 aa20.46■□□□□ 0.87
FDPS-202ENST00000368356 KDM3BQ7LBC6 1761 aa20.46■□□□□ 0.87
FDPS-202ENST00000368356 ERVV-2B6SEH9 535 aa20.45■□□□□ 0.86
FDPS-202ENST00000368356 NBPF14Q5TI25 921 aa20.45■□□□□ 0.86
FDPS-202ENST00000368356 SLC52A2Q9HAB3 445 aa20.45■□□□□ 0.86
FDPS-202ENST00000368356 FANCIQ9NVI1 1328 aa20.44■□□□□ 0.86
FDPS-202ENST00000368356 LAS1LQ9Y4W2 734 aaKnown RBP20.44■□□□□ 0.86
FDPS-202ENST00000368356 PROM2Q8N271 834 aa20.43■□□□□ 0.86
FDPS-202ENST00000368356 MBIPQ9NS73 344 aa20.43■□□□□ 0.86
FDPS-202ENST00000368356 PAPPAQ13219 1627 aa20.42■□□□□ 0.86
FDPS-202ENST00000368356 NFATC2IPQ8NCF5 419 aa20.42■□□□□ 0.86
FDPS-202ENST00000368356 TSR2Q969E8 191 aaKnown RBP20.42■□□□□ 0.86
FDPS-202ENST00000368356 SLC27A3Q5K4L6 730 aa20.41■□□□□ 0.86
FDPS-202ENST00000368356 TMOD3Q9NYL9 352 aa20.41■□□□□ 0.86
FDPS-202ENST00000368356 CABP4P57796 275 aa20.4■□□□□ 0.86
FDPS-202ENST00000368356 TSPYL4Q9UJ04 414 aa20.4■□□□□ 0.86
FDPS-202ENST00000368356 PALLDQ8WX93 1383 aa20.39■□□□□ 0.86
FDPS-202ENST00000368356 PSDA5PKW4 1024 aaPredicted RBP20.39■□□□□ 0.85
FDPS-202ENST00000368356 BTBD11A6QL63 1104 aa20.39■□□□□ 0.85
FDPS-202ENST00000368356 R3HDM1Q15032 1099 aaKnown RBP20.39■□□□□ 0.85
FDPS-202ENST00000368356 PIGBQ92521 554 aa20.38■□□□□ 0.85
FDPS-202ENST00000368356 SMARCC1Q92922 1105 aaPredicted RBP20.38■□□□□ 0.85
FDPS-202ENST00000368356 MIS18AQ9NYP9 233 aa20.38■□□□□ 0.85
FDPS-202ENST00000368356 UBR2Q8IWV8 1755 aa20.37■□□□□ 0.85
FDPS-202ENST00000368356 EXOSC9Q06265 439 aaKnown RBP20.36■□□□□ 0.85
FDPS-202ENST00000368356 ANO8Q9HCE9 1232 aaPredicted RBP20.36■□□□□ 0.85
FDPS-202ENST00000368356 STK32BQ9NY57 414 aa20.36■□□□□ 0.85
FDPS-202ENST00000368356 CT47B1P0C2W7 299 aaPredicted RBP20.36■□□□□ 0.85
FDPS-202ENST00000368356 HMGB2P26583 209 aaKnown RBP20.36■□□□□ 0.85
FDPS-202ENST00000368356 CCNL1Q9UK58 526 aaPredicted RBP20.36■□□□□ 0.85
FDPS-202ENST00000368356 C5P01031 1676 aa20.35■□□□□ 0.85
FDPS-202ENST00000368356 TAF1LQ8IZX4 1826 aa20.35■□□□□ 0.85
FDPS-202ENST00000368356 ZNF790Q6PG37 636 aa20.35■□□□□ 0.85
FDPS-202ENST00000368356 LRRC4BQ9NT99 713 aa20.35■□□□□ 0.85
FDPS-202ENST00000368356 QSER1Q2KHR3 1735 aa20.34■□□□□ 0.85
FDPS-202ENST00000368356 EIF4A1P60842 406 aaKnown RBP20.33■□□□□ 0.84
FDPS-202ENST00000368356 SLC15A2Q16348 729 aa20.33■□□□□ 0.84
FDPS-202ENST00000368356 HEG1Q9ULI3 1381 aa20.33■□□□□ 0.84
FDPS-202ENST00000368356 KCNQ3O43525 872 aa20.32■□□□□ 0.84
FDPS-202ENST00000368356 C8orf58Q8NAV2 365 aa20.32■□□□□ 0.84
FDPS-202ENST00000368356 SOS1Q07889 1333 aaPredicted RBP20.32■□□□□ 0.84
FDPS-202ENST00000368356 LRP5O75197 1615 aa20.32■□□□□ 0.84
FDPS-202ENST00000368356 CASZ1Q86V15 1759 aa20.32■□□□□ 0.84
FDPS-202ENST00000368356 VAMP4O75379 141 aa20.31■□□□□ 0.84
FDPS-202ENST00000368356 SLC39A6Q13433 755 aa20.31■□□□□ 0.84
FDPS-202ENST00000368356 ZNF428Q96B54 188 aa20.31■□□□□ 0.84
FDPS-202ENST00000368356 ZNF831Q5JPB2 1677 aa20.31■□□□□ 0.84
FDPS-202ENST00000368356 CACNA1FO60840 1977 aa20.31■□□□□ 0.84
FDPS-202ENST00000368356 TWISTNBQ3B726 338 aaPredicted RBP20.3■□□□□ 0.84
FDPS-202ENST00000368356 TSPYL6Q8N831 410 aa20.3■□□□□ 0.84
FDPS-202ENST00000368356 ATG3Q9NT62 314 aa20.3■□□□□ 0.84
FDPS-202ENST00000368356 ASAP1Q9ULH1 1129 aa20.3■□□□□ 0.84
FDPS-202ENST00000368356 KRT24Q2M2I5 525 aa20.29■□□□□ 0.84
FDPS-202ENST00000368356 TTC5Q8N0Z6 440 aa20.29■□□□□ 0.84
FDPS-202ENST00000368356 RCAN3Q9UKA8 241 aa20.29■□□□□ 0.84
FDPS-202ENST00000368356 TUBGCP6Q96RT7 1819 aa20.29■□□□□ 0.84
FDPS-202ENST00000368356 KCPQ6ZWJ8 1503 aa20.29■□□□□ 0.84
FDPS-202ENST00000368356 LOC102724428A0A0B4J2F2 783 aa20.28■□□□□ 0.84
FDPS-202ENST00000368356 HOXB7P09629 217 aa20.28■□□□□ 0.84
FDPS-202ENST00000368356 KCNQ4P56696 695 aa20.28■□□□□ 0.84
FDPS-202ENST00000368356 SIK1P57059 783 aa20.28■□□□□ 0.84
FDPS-202ENST00000368356 C4BP0C0L5 1744 aa20.28■□□□□ 0.84
FDPS-202ENST00000368356 ELL2O00472 640 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms