RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 TRPM3Q9HCF6 1732 aaPredicted RBP22.53■■□□□ 1.2
LMNA-207ENST00000368301 C1orf167Q5SNV9 1468 aa22.53■■□□□ 1.2
LMNA-207ENST00000368301 MED1Q15648 1581 aaPredicted RBP22.53■■□□□ 1.2
LMNA-207ENST00000368301 PXDNQ92626 1479 aa22.53■■□□□ 1.2
LMNA-207ENST00000368301 ANKRD24Q8TF21 1146 aa22.53■■□□□ 1.2
LMNA-207ENST00000368301 KIF2CQ99661 725 aa22.53■■□□□ 1.2
LMNA-207ENST00000368301 CDC45O75419 566 aa22.52■■□□□ 1.2
LMNA-207ENST00000368301 GNAI2P04899 355 aa22.52■■□□□ 1.2
LMNA-207ENST00000368301 EIF2S2P20042 333 aaKnown RBP22.52■■□□□ 1.2
LMNA-207ENST00000368301 EIF4A1P60842 406 aaKnown RBP22.52■■□□□ 1.2
LMNA-207ENST00000368301 DDX17Q92841 729 aaKnown RBP22.52■■□□□ 1.2
LMNA-207ENST00000368301 C19orf44Q9H6X5 657 aa22.5■■□□□ 1.19
LMNA-207ENST00000368301 EXOC6BQ9Y2D4 811 aa22.5■■□□□ 1.19
LMNA-207ENST00000368301 PNMA6EA0A0J9YXQ4 647 aa22.49■■□□□ 1.19
LMNA-207ENST00000368301 AKAP4Q5JQC9 854 aa22.49■■□□□ 1.19
LMNA-207ENST00000368301 LMO7Q8WWI1 1683 aa22.49■■□□□ 1.19
LMNA-207ENST00000368301 CACNA1FO60840 1977 aa22.49■■□□□ 1.19
LMNA-207ENST00000368301 HMMRO75330 724 aa22.49■■□□□ 1.19
LMNA-207ENST00000368301 PLEKHO1Q53GL0 409 aaPredicted RBP22.49■■□□□ 1.19
LMNA-207ENST00000368301 SOS1Q07889 1333 aaPredicted RBP22.49■■□□□ 1.19
LMNA-207ENST00000368301 KDM3BQ7LBC6 1761 aa22.48■■□□□ 1.19
LMNA-207ENST00000368301 ZC3H6P61129 1189 aaKnown RBP22.48■■□□□ 1.19
LMNA-207ENST00000368301 ANXA1P04083 346 aa22.47■■□□□ 1.19
LMNA-207ENST00000368301 SDSP20132 328 aa22.47■■□□□ 1.19
LMNA-207ENST00000368301 HSCBQ8IWL3 235 aa22.47■■□□□ 1.19
LMNA-207ENST00000368301 CHPF2Q9P2E5 772 aa22.47■■□□□ 1.19
LMNA-207ENST00000368301 LRRFIP2Q9Y608 721 aaKnown RBP22.47■■□□□ 1.19
LMNA-207ENST00000368301 NCAPD2Q15021 1401 aa22.47■■□□□ 1.19
LMNA-207ENST00000368301 BTBD11A6QL63 1104 aa22.47■■□□□ 1.19
LMNA-207ENST00000368301 TEFQ10587 303 aa22.47■■□□□ 1.19
LMNA-207ENST00000368301 RBM42Q9BTD8 480 aaKnown RBP22.47■■□□□ 1.19
LMNA-207ENST00000368301 USP44Q9H0E7 712 aa22.47■■□□□ 1.19
LMNA-207ENST00000368301 RGPD5Q99666 1765 aa22.47■■□□□ 1.19
LMNA-207ENST00000368301 CD2BP2O95400 341 aaKnown RBP22.46■■□□□ 1.19
LMNA-207ENST00000368301 GNAI3P08754 354 aa22.46■■□□□ 1.19
LMNA-207ENST00000368301 RNMTO43148 476 aaKnown RBP22.45■■□□□ 1.18
LMNA-207ENST00000368301 GSE1Q14687 1217 aa22.45■■□□□ 1.18
LMNA-207ENST00000368301 TSHZ3Q63HK5 1081 aa22.45■■□□□ 1.18
LMNA-207ENST00000368301 TMEM94Q12767 1356 aa22.44■■□□□ 1.18
LMNA-207ENST00000368301 STRCP1A6NGW2 1772 aa22.44■■□□□ 1.18
LMNA-207ENST00000368301 AMOTQ4VCS5 1084 aa22.43■■□□□ 1.18
LMNA-207ENST00000368301 KIF1AQ12756 1690 aa22.43■■□□□ 1.18
LMNA-207ENST00000368301 N4BP2Q86UW6 1770 aaPredicted RBP22.43■■□□□ 1.18
LMNA-207ENST00000368301 ATP8B2P98198 1209 aa22.43■■□□□ 1.18
LMNA-207ENST00000368301 C1orf141Q5JVX7 400 aa22.43■■□□□ 1.18
LMNA-207ENST00000368301 SNX21Q969T3 373 aa22.42■■□□□ 1.18
LMNA-207ENST00000368301 MST1RQ04912 1400 aa22.42■■□□□ 1.18
LMNA-207ENST00000368301 PXDNLA1KZ92 1463 aa22.42■■□□□ 1.18
LMNA-207ENST00000368301 ALS2Q96Q42 1657 aa22.42■■□□□ 1.18
LMNA-207ENST00000368301 PRAMEF22A3QJZ6 481 aa22.41■■□□□ 1.18
LMNA-207ENST00000368301 ATF3P18847 181 aa22.41■■□□□ 1.18
LMNA-207ENST00000368301 PDE1AP54750 535 aa22.41■■□□□ 1.18
LMNA-207ENST00000368301 CAMTA1Q9Y6Y1 1673 aa22.41■■□□□ 1.18
LMNA-207ENST00000368301 ERBB3P21860 1342 aa22.41■■□□□ 1.18
LMNA-207ENST00000368301 UBTFL1P0CB47 393 aaPredicted RBP22.4■■□□□ 1.18
LMNA-207ENST00000368301 PI4KAP2A4QPH2 592 aa22.39■■□□□ 1.18
LMNA-207ENST00000368301 PI4KAP1Q8N8J0 262 aa22.39■■□□□ 1.18
LMNA-207ENST00000368301 CABLES1Q8TDN4 633 aa22.39■■□□□ 1.18
LMNA-207ENST00000368301 NCOA3Q9Y6Q9 1424 aa22.39■■□□□ 1.18
LMNA-207ENST00000368301 HOXB7P09629 217 aa22.39■■□□□ 1.17
LMNA-207ENST00000368301 LRRCC1Q9C099 1032 aa22.38■■□□□ 1.17
LMNA-207ENST00000368301 SALL3Q9BXA9 1300 aa22.38■■□□□ 1.17
LMNA-207ENST00000368301 IBTKQ9P2D0 1353 aaPredicted RBP22.38■■□□□ 1.17
LMNA-207ENST00000368301 PROSER3Q2NL68 480 aa22.38■■□□□ 1.17
LMNA-207ENST00000368301 SRCIN1Q9C0H9 1055 aa22.38■■□□□ 1.17
LMNA-207ENST00000368301 CHMP5Q9NZZ3 219 aa22.38■■□□□ 1.17
LMNA-207ENST00000368301 HSPA2P54652 639 aa22.37■■□□□ 1.17
LMNA-207ENST00000368301 OSBPL3Q9H4L5 887 aa22.37■■□□□ 1.17
LMNA-207ENST00000368301 NBPF7P0C2Y1 421 aaPredicted RBP22.37■■□□□ 1.17
LMNA-207ENST00000368301 USP26Q9BXU7 913 aa22.37■■□□□ 1.17
LMNA-207ENST00000368301 HSP90AB1P08238 724 aaKnown RBP22.36■■□□□ 1.17
LMNA-207ENST00000368301 BEND3Q5T5X7 828 aa22.36■■□□□ 1.17
LMNA-207ENST00000368301 ADCY9O60503 1353 aa22.36■■□□□ 1.17
LMNA-207ENST00000368301 DDIT3P35638 169 aa22.36■■□□□ 1.17
LMNA-207ENST00000368301 DNAAF4Q8WXU2 420 aa22.36■■□□□ 1.17
LMNA-207ENST00000368301 GIGYF1O75420 1035 aaPredicted RBP22.35■■□□□ 1.17
LMNA-207ENST00000368301 FOXD4L1Q9NU39 408 aa22.35■■□□□ 1.17
LMNA-207ENST00000368301 NLRP2Q9NX02 1062 aa22.35■■□□□ 1.17
LMNA-207ENST00000368301 PPP1R42Q7Z4L9 355 aa22.34■■□□□ 1.17
LMNA-207ENST00000368301 CHRNA2Q15822 529 aa22.33■■□□□ 1.17
LMNA-207ENST00000368301 SSH3Q8TE77 659 aa22.33■■□□□ 1.17
LMNA-207ENST00000368301 IL1RAPL2Q9NP60 686 aa22.33■■□□□ 1.17
LMNA-207ENST00000368301 OVOS2A0A0G2JMS6 1433 aa22.33■■□□□ 1.16
LMNA-207ENST00000368301 HEG1Q9ULI3 1381 aa22.33■■□□□ 1.16
LMNA-207ENST00000368301 MX1P20591 662 aa22.33■■□□□ 1.16
LMNA-207ENST00000368301 SIPA1L3O60292 1781 aaPredicted RBP22.32■■□□□ 1.16
LMNA-207ENST00000368301 DBF4Q9UBU7 674 aaPredicted RBP22.32■■□□□ 1.16
LMNA-207ENST00000368301 K7ELQ4 463 aaPredicted RBP22.31■■□□□ 1.16
LMNA-207ENST00000368301 SLC39A6Q13433 755 aa22.31■■□□□ 1.16
LMNA-207ENST00000368301 TUBGCP6Q96RT7 1819 aa22.31■■□□□ 1.16
LMNA-207ENST00000368301 MCM4P33991 863 aa22.3■■□□□ 1.16
LMNA-207ENST00000368301 POLA2Q14181 598 aa22.3■■□□□ 1.16
LMNA-207ENST00000368301 CASC1Q6TDU7 716 aa22.3■■□□□ 1.16
LMNA-207ENST00000368301 RAPGEF4Q8WZA2 1011 aa22.3■■□□□ 1.16
LMNA-207ENST00000368301 MEGF6O75095 1541 aa22.3■■□□□ 1.16
LMNA-207ENST00000368301 MAP3K2Q9Y2U5 619 aa22.3■■□□□ 1.16
LMNA-207ENST00000368301 COL18A1P39060 1754 aa22.29■■□□□ 1.16
LMNA-207ENST00000368301 SRGAP3O43295 1099 aa22.29■■□□□ 1.16
LMNA-207ENST00000368301 SURF6O75683 361 aaKnown RBP22.29■■□□□ 1.16
LMNA-207ENST00000368301 KDM6AO15550 1401 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms