RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 CYP27B1O15528 508 aa20.91■□□□□ 0.94
VAMP4-202ENST00000367740 KDM2BQ8NHM5 1336 aa20.9■□□□□ 0.94
VAMP4-202ENST00000367740 GNPATO15228 680 aa20.9■□□□□ 0.94
VAMP4-202ENST00000367740 FCHSD2O94868 740 aa20.9■□□□□ 0.94
VAMP4-202ENST00000367740 TATP17735 454 aaPredicted RBP20.9■□□□□ 0.94
VAMP4-202ENST00000367740 SMG6Q86US8 1419 aaKnown RBP20.89■□□□□ 0.94
VAMP4-202ENST00000367740 LOC102724428A0A0B4J2F2 783 aa20.89■□□□□ 0.93
VAMP4-202ENST00000367740 DPEP1P16444 411 aa20.89■□□□□ 0.93
VAMP4-202ENST00000367740 SIK1P57059 783 aa20.89■□□□□ 0.93
VAMP4-202ENST00000367740 PIGBQ92521 554 aa20.89■□□□□ 0.93
VAMP4-202ENST00000367740 COG3Q96JB2 828 aa20.89■□□□□ 0.93
VAMP4-202ENST00000367740 ITPK1Q13572 414 aa20.88■□□□□ 0.93
VAMP4-202ENST00000367740 RRAGCQ9HB90 399 aa20.88■□□□□ 0.93
VAMP4-202ENST00000367740 SMC1BQ8NDV3 1235 aa20.87■□□□□ 0.93
VAMP4-202ENST00000367740 COL5A3P25940 1745 aaPredicted RBP20.85■□□□□ 0.93
VAMP4-202ENST00000367740 KCNA3P22001 575 aa20.85■□□□□ 0.93
VAMP4-202ENST00000367740 RRS1Q15050 365 aaKnown RBP20.85■□□□□ 0.93
VAMP4-202ENST00000367740 RNF181Q9P0P0 153 aa20.84■□□□□ 0.93
VAMP4-202ENST00000367740 CCDC87Q9NVE4 849 aa20.83■□□□□ 0.93
VAMP4-202ENST00000367740 ZNF831Q5JPB2 1677 aa20.83■□□□□ 0.92
VAMP4-202ENST00000367740 DCAF5Q96JK2 942 aa20.82■□□□□ 0.92
VAMP4-202ENST00000367740 TMF1P82094 1093 aa20.81■□□□□ 0.92
VAMP4-202ENST00000367740 NLGN1Q8N2Q7 840 aa20.81■□□□□ 0.92
VAMP4-202ENST00000367740 INSRP06213 1382 aa20.81■□□□□ 0.92
VAMP4-202ENST00000367740 ATP6V1AP38606 617 aa20.8■□□□□ 0.92
VAMP4-202ENST00000367740 NKX1-1Q15270 411 aaPredicted RBP20.8■□□□□ 0.92
VAMP4-202ENST00000367740 ASAP1Q9ULH1 1129 aa20.8■□□□□ 0.92
VAMP4-202ENST00000367740 TIAM2Q8IVF5 1701 aa20.8■□□□□ 0.92
VAMP4-202ENST00000367740 KDRP35968 1356 aa20.8■□□□□ 0.92
VAMP4-202ENST00000367740 NCAPD2Q15021 1401 aa20.78■□□□□ 0.92
VAMP4-202ENST00000367740 GYS1P13807 737 aa20.78■□□□□ 0.92
VAMP4-202ENST00000367740 HSP90AB2PQ58FF8 381 aa20.78■□□□□ 0.92
VAMP4-202ENST00000367740 PUS7Q96PZ0 661 aaKnown RBP20.78■□□□□ 0.92
VAMP4-202ENST00000367740 PIM2Q9P1W9 311 aa20.78■□□□□ 0.92
VAMP4-202ENST00000367740 KIF20BQ96Q89 1820 aa20.77■□□□□ 0.92
VAMP4-202ENST00000367740 TRAPPC3LQ5T215 181 aa20.77■□□□□ 0.92
VAMP4-202ENST00000367740 RNF39Q9H2S5 420 aa20.77■□□□□ 0.92
VAMP4-202ENST00000367740 TMOD3Q9NYL9 352 aa20.77■□□□□ 0.92
VAMP4-202ENST00000367740 RTCBQ9Y3I0 505 aaKnown RBP20.77■□□□□ 0.92
VAMP4-202ENST00000367740 FLT4P35916 1363 aa20.76■□□□□ 0.91
VAMP4-202ENST00000367740 DALRD3Q5D0E6 543 aaKnown RBP20.76■□□□□ 0.91
VAMP4-202ENST00000367740 PARP3Q9Y6F1 533 aa20.76■□□□□ 0.91
VAMP4-202ENST00000367740 KDM6AO15550 1401 aaPredicted RBP20.76■□□□□ 0.91
VAMP4-202ENST00000367740 MYH14Q7Z406 1995 aaKnown RBP20.76■□□□□ 0.91
VAMP4-202ENST00000367740 ARHGEF1Q92888 912 aaKnown RBP20.75■□□□□ 0.91
VAMP4-202ENST00000367740 ZC3H4Q9UPT8 1303 aaKnown RBP20.74■□□□□ 0.91
VAMP4-202ENST00000367740 CCDC88AQ3V6T2 1871 aa20.73■□□□□ 0.91
VAMP4-202ENST00000367740 SIN3AQ96ST3 1273 aa20.73■□□□□ 0.91
VAMP4-202ENST00000367740 CARD11Q9BXL7 1154 aa20.73■□□□□ 0.91
VAMP4-202ENST00000367740 ATG3Q9NT62 314 aa20.73■□□□□ 0.91
VAMP4-202ENST00000367740 KIF24Q5T7B8 1368 aa20.72■□□□□ 0.91
VAMP4-202ENST00000367740 SLC4A9Q96Q91 983 aa20.72■□□□□ 0.91
VAMP4-202ENST00000367740 GGNBP2Q9H3C7 697 aa20.72■□□□□ 0.91
VAMP4-202ENST00000367740 ANKRD26Q9UPS8 1709 aa20.72■□□□□ 0.91
VAMP4-202ENST00000367740 RASSF7Q02833 373 aa20.71■□□□□ 0.91
VAMP4-202ENST00000367740 DLEC1Q9Y238 1755 aa20.71■□□□□ 0.91
VAMP4-202ENST00000367740 FYB1O15117 783 aa20.7■□□□□ 0.9
VAMP4-202ENST00000367740 VEGFAP15692 232 aaPredicted RBP20.7■□□□□ 0.9
VAMP4-202ENST00000367740 CHRNA5P30532 468 aa20.7■□□□□ 0.9
VAMP4-202ENST00000367740 RFC4P35249 363 aa20.7■□□□□ 0.9
VAMP4-202ENST00000367740 SPG7Q9UQ90 795 aa20.7■□□□□ 0.9
VAMP4-202ENST00000367740 CNTNAP4Q9C0A0 1308 aa20.7■□□□□ 0.9
VAMP4-202ENST00000367740 RC3H1Q5TC82 1133 aaKnown RBP20.69■□□□□ 0.9
VAMP4-202ENST00000367740 GLTPD2A6NH11 291 aa20.68■□□□□ 0.9
VAMP4-202ENST00000367740 ADAMTS7Q9UKP4 1686 aa20.67■□□□□ 0.9
VAMP4-202ENST00000367740 FOXN1O15353 648 aa20.67■□□□□ 0.9
VAMP4-202ENST00000367740 RPS6KA4O75676 772 aa20.67■□□□□ 0.9
VAMP4-202ENST00000367740 DDR1Q08345 913 aa20.67■□□□□ 0.9
VAMP4-202ENST00000367740 PHKG2P15735 406 aa20.66■□□□□ 0.9
VAMP4-202ENST00000367740 AFDNP55196 1824 aaKnown RBP20.65■□□□□ 0.9
VAMP4-202ENST00000367740 TONSLQ96HA7 1378 aa20.65■□□□□ 0.9
VAMP4-202ENST00000367740 PRDM10Q9NQV6 1147 aa20.65■□□□□ 0.9
VAMP4-202ENST00000367740 MKRN1Q9UHC7 482 aaKnown RBP20.65■□□□□ 0.9
VAMP4-202ENST00000367740 TJP1Q07157 1748 aa20.64■□□□□ 0.9
VAMP4-202ENST00000367740 POTECB2RU33 542 aa20.64■□□□□ 0.89
VAMP4-202ENST00000367740 LMNB1P20700 586 aa20.64■□□□□ 0.89
VAMP4-202ENST00000367740 NEUROD1Q13562 356 aa20.64■□□□□ 0.89
VAMP4-202ENST00000367740 FKBP8Q14318 412 aa20.64■□□□□ 0.89
VAMP4-202ENST00000367740 TESK2Q96S53 571 aa20.64■□□□□ 0.89
VAMP4-202ENST00000367740 RBM42Q9BTD8 480 aaKnown RBP20.64■□□□□ 0.89
VAMP4-202ENST00000367740 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.64■□□□□ 0.89
VAMP4-202ENST00000367740 SRP68Q9UHB9 627 aaKnown RBP20.64■□□□□ 0.89
VAMP4-202ENST00000367740 IFNL2Q8IZJ0 200 aa20.63■□□□□ 0.89
VAMP4-202ENST00000367740 CREBZFQ9NS37 354 aa20.63■□□□□ 0.89
VAMP4-202ENST00000367740 EMILIN1Q9Y6C2 1016 aa20.63■□□□□ 0.89
VAMP4-202ENST00000367740 NRXN2Q9P2S2 1712 aa20.62■□□□□ 0.89
VAMP4-202ENST00000367740 USP42Q9H9J4 1324 aaKnown RBP20.62■□□□□ 0.89
VAMP4-202ENST00000367740 FAM161AQ3B820 660 aa20.62■□□□□ 0.89
VAMP4-202ENST00000367740 PCDH10Q9P2E7 1040 aa20.62■□□□□ 0.89
VAMP4-202ENST00000367740 DICER1Q9UPY3 1922 aaKnown RBP20.62■□□□□ 0.89
VAMP4-202ENST00000367740 VIRMAQ69YN4 1812 aaKnown RBP20.62■□□□□ 0.89
VAMP4-202ENST00000367740 POLRMTO00411 1230 aaKnown RBP20.6■□□□□ 0.89
VAMP4-202ENST00000367740 CNTNAP1P78357 1384 aa20.59■□□□□ 0.89
VAMP4-202ENST00000367740 EYA1Q99502 592 aa20.58■□□□□ 0.89
VAMP4-202ENST00000367740 NFKBIEO00221 500 aa20.56■□□□□ 0.88
VAMP4-202ENST00000367740 TM4SF1P30408 202 aa20.56■□□□□ 0.88
VAMP4-202ENST00000367740 CRKLP46109 303 aaKnown RBP20.56■□□□□ 0.88
VAMP4-202ENST00000367740 CTCFP49711 727 aaPredicted RBP20.56■□□□□ 0.88
VAMP4-202ENST00000367740 ERVV-2B6SEH9 535 aa20.55■□□□□ 0.88
VAMP4-202ENST00000367740 FER1L6Q2WGJ9 1857 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms