RNA–Protein interactions for RNA: ENST00000367718.5

TNFSF4-202, Transcript of TNF superfamily member 4, humanhuman

TSL 1 (best) BASIC

Gene TNFSF4, Length 3,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-202ENST00000367718 ZNF692Q9BU19 519 aaPredicted RBP6.94□□□□□ -1.3
TNFSF4-202ENST00000367718 DDX49Q9Y6V7 483 aaKnown RBP6.94□□□□□ -1.3
TNFSF4-202ENST00000367718 GNAT3A8MTJ3 354 aa6.93□□□□□ -1.3
TNFSF4-202ENST00000367718 PRPF40AO75400 957 aaKnown RBP6.93□□□□□ -1.3
TNFSF4-202ENST00000367718 SLFNL1Q499Z3 407 aa6.93□□□□□ -1.3
TNFSF4-202ENST00000367718 CWC27Q6UX04 472 aaKnown RBP6.93□□□□□ -1.3
TNFSF4-202ENST00000367718 RRAGDQ9NQL2 400 aaPredicted RBP6.93□□□□□ -1.3
TNFSF4-202ENST00000367718 PTPRUQ92729 1446 aa6.93□□□□□ -1.3
TNFSF4-202ENST00000367718 ATP5J2-PTCD1G3V325 749 aa6.93□□□□□ -1.3
TNFSF4-202ENST00000367718 PTCD1O75127 700 aaKnown RBP6.93□□□□□ -1.3
TNFSF4-202ENST00000367718 COL9A3Q14050 684 aaPredicted RBP6.93□□□□□ -1.3
TNFSF4-202ENST00000367718 PHF8Q9UPP1 1060 aa6.93□□□□□ -1.3
TNFSF4-202ENST00000367718 AXIN2Q9Y2T1 843 aa6.93□□□□□ -1.3
TNFSF4-202ENST00000367718 LMTK2Q8IWU2 1503 aa6.93□□□□□ -1.3
TNFSF4-202ENST00000367718 EDC4Q6P2E9 1401 aaKnown RBP6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 PNPLA6Q8IY17 1366 aa6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 UBTFL1P0CB47 393 aaPredicted RBP6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 TTC22Q5TAA0 569 aa6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 CCDC8Q9H0W5 538 aaPredicted RBP6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 TMEM131LA2VDJ0 1609 aa6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 ABCC4O15439 1325 aa6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 BMP2KLQ5H9B9 411 aa6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 PPP1R42Q7Z4L9 355 aa6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 UBE2Q2Q8WVN8 375 aa6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 NAP1L5Q96NT1 182 aaPredicted RBP6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 IL16Q14005 1332 aa6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 BTBD11A6QL63 1104 aa6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 K7ELQ4 463 aaPredicted RBP6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 ANKRD44Q8N8A2 993 aa6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 GCC1Q96CN9 775 aa6.92□□□□□ -1.3
TNFSF4-202ENST00000367718 GNAI2P04899 355 aa6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 DSG3P32926 999 aa6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 HAP1P54257 671 aaPredicted RBP6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 PROSER2Q86WR7 435 aaPredicted RBP6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 DCTPP1Q9H773 170 aa6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 C9orf78Q9NZ63 289 aaPredicted RBP6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 NAP1L2Q9ULW6 460 aaPredicted RBP6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 NSFL1CQ9UNZ2 370 aaKnown RBP6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 RIMS1Q86UR5 1692 aaKnown RBP6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 MAP2P11137 1827 aaKnown RBP6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 PDE1AP54750 535 aa6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 THEMISQ8N1K5 641 aaPredicted RBP6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 KAT6BQ8WYB5 2073 aa6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 RTL1A6NKG5 1358 aa6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 NINLQ9Y2I6 1382 aa6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 SETBP1Q9Y6X0 1596 aa6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 SOS1Q07889 1333 aaPredicted RBP6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 PREX1Q8TCU6 1659 aa6.91□□□□□ -1.3
TNFSF4-202ENST00000367718 AK9Q5TCS8 1911 aa6.9□□□□□ -1.3
TNFSF4-202ENST00000367718 IFT172Q9UG01 1749 aa6.9□□□□□ -1.3
TNFSF4-202ENST00000367718 FAM177BA6PVY3 158 aa6.9□□□□□ -1.3
TNFSF4-202ENST00000367718 USP44Q9H0E7 712 aa6.9□□□□□ -1.3
TNFSF4-202ENST00000367718 STRN4Q9NRL3 753 aa6.9□□□□□ -1.3
TNFSF4-202ENST00000367718 RIMBP3CA6NJZ7 1639 aa6.9□□□□□ -1.31
TNFSF4-202ENST00000367718 RIMBP3BA6NNM3 1639 aa6.9□□□□□ -1.31
TNFSF4-202ENST00000367718 RIMBP3Q9UFD9 1639 aa6.9□□□□□ -1.31
TNFSF4-202ENST00000367718 CT47B1P0C2W7 299 aaPredicted RBP6.9□□□□□ -1.31
TNFSF4-202ENST00000367718 KCNJ4P48050 445 aa6.9□□□□□ -1.31
TNFSF4-202ENST00000367718 CACNB1Q02641 598 aaPredicted RBP6.9□□□□□ -1.31
TNFSF4-202ENST00000367718 STK3Q13188 491 aa6.9□□□□□ -1.31
TNFSF4-202ENST00000367718 LRRCC1Q9C099 1032 aa6.9□□□□□ -1.31
TNFSF4-202ENST00000367718 CPSF1Q10570 1443 aaKnown RBP6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 MX1P20591 662 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 CCDC30Q5VVM6 783 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 FAM173BQ6P4H8 233 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 MAP3K2Q9Y2U5 619 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 ARHGAP31Q2M1Z3 1444 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 INTS3Q68E01 1043 aaKnown RBP6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 FERMT3Q86UX7 667 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 NFATC2IPQ8NCF5 419 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 USP26Q9BXU7 913 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 USP6P35125 1406 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 ADAMTS13Q76LX8 1427 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 HSP90AB3PQ58FF7 597 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 C1orf141Q5JVX7 400 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 ANKRD24Q8TF21 1146 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 LRRC2Q9BYS8 371 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 BOLA2Q9H3K6 86 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 TLR7Q9NYK1 1049 aaKnown RBP6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 MED14O60244 1454 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 ATP7BP35670 1465 aa6.89□□□□□ -1.31
TNFSF4-202ENST00000367718 HMMRO75330 724 aa6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 GCP02774 474 aa6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 RAB11FIP4Q86YS3 637 aa6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 NECAB1Q8N987 351 aa6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 FBXW7Q969H0 707 aa6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 PUS7Q96PZ0 661 aaKnown RBP6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 CEP170BQ9Y4F5 1589 aaPredicted RBP6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 RICTORQ6R327 1708 aa6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 PLEKHG3A1L390 1219 aa6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 CASC1Q6TDU7 716 aa6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 STK11IPQ8N1F8 1099 aa6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 CHMP4CQ96CF2 233 aa6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 SRCIN1Q9C0H9 1055 aa6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 ZFYVE9O95405 1425 aa6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 KIAA1210Q9ULL0 1709 aa6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 SYTL4Q96C24 671 aaPredicted RBP6.88□□□□□ -1.31
TNFSF4-202ENST00000367718 DLC1Q96QB1 1528 aa6.87□□□□□ -1.31
TNFSF4-202ENST00000367718 SYCE3A1L190 88 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms