RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 GTF3C3Q9Y5Q9 886 aa12.44□□□□□ -0.42
VTA1-201ENST00000367621 IL16Q14005 1332 aa12.43□□□□□ -0.42
VTA1-201ENST00000367621 POTEB3A0JP26 581 aa12.43□□□□□ -0.42
VTA1-201ENST00000367621 FAM83GA6ND36 823 aa12.43□□□□□ -0.42
VTA1-201ENST00000367621 POTEBQ6S5H4 581 aa12.43□□□□□ -0.42
VTA1-201ENST00000367621 HS3ST6Q96QI5 342 aa12.43□□□□□ -0.42
VTA1-201ENST00000367621 BOLA1Q9Y3E2 137 aa12.43□□□□□ -0.42
VTA1-201ENST00000367621 LTN1O94822 1766 aa12.43□□□□□ -0.42
VTA1-201ENST00000367621 KRTAP3-3Q9BYR6 98 aa12.42□□□□□ -0.42
VTA1-201ENST00000367621 KRTAP3-2Q9BYR7 98 aa12.42□□□□□ -0.42
VTA1-201ENST00000367621 COL16A1Q07092 1604 aaPredicted RBP12.41□□□□□ -0.42
VTA1-201ENST00000367621 NEFMP07197 916 aa12.41□□□□□ -0.42
VTA1-201ENST00000367621 ZNF853P0CG23 659 aa12.41□□□□□ -0.42
VTA1-201ENST00000367621 THUMPD2Q9BTF0 503 aaKnown RBP12.41□□□□□ -0.42
VTA1-201ENST00000367621 PRDM11Q9NQV5 511 aa12.41□□□□□ -0.42
VTA1-201ENST00000367621 LMO7Q8WWI1 1683 aa12.41□□□□□ -0.42
VTA1-201ENST00000367621 CAMTA1Q9Y6Y1 1673 aa12.41□□□□□ -0.42
VTA1-201ENST00000367621 FAM205CA6NFA0 338 aa12.39□□□□□ -0.43
VTA1-201ENST00000367621 PLCB2Q00722 1185 aa12.39□□□□□ -0.43
VTA1-201ENST00000367621 DCTN1Q14203 1278 aa12.39□□□□□ -0.43
VTA1-201ENST00000367621 RCAN3Q9UKA8 241 aa12.39□□□□□ -0.43
VTA1-201ENST00000367621 CIZ1Q9ULV3 898 aaPredicted RBP12.39□□□□□ -0.43
VTA1-201ENST00000367621 COL22A1Q8NFW1 1626 aaPredicted RBP12.39□□□□□ -0.43
VTA1-201ENST00000367621 ABCA3Q99758 1704 aa12.38□□□□□ -0.43
VTA1-201ENST00000367621 HOXB3P14651 431 aaPredicted RBP12.38□□□□□ -0.43
VTA1-201ENST00000367621 LMOD3Q0VAK6 560 aa12.38□□□□□ -0.43
VTA1-201ENST00000367621 GAS2L2Q8NHY3 880 aa12.38□□□□□ -0.43
VTA1-201ENST00000367621 NLRP2Q9NX02 1062 aa12.38□□□□□ -0.43
VTA1-201ENST00000367621 FANCIQ9NVI1 1328 aa12.37□□□□□ -0.43
VTA1-201ENST00000367621 CRB1P82279 1406 aa12.37□□□□□ -0.43
VTA1-201ENST00000367621 G3V3G9 751 aa12.37□□□□□ -0.43
VTA1-201ENST00000367621 HTATSF1O43719 755 aaKnown RBP12.37□□□□□ -0.43
VTA1-201ENST00000367621 HAP1P54257 671 aaPredicted RBP12.37□□□□□ -0.43
VTA1-201ENST00000367621 MCM10Q7L590 875 aa12.37□□□□□ -0.43
VTA1-201ENST00000367621 TSR2Q969E8 191 aaKnown RBP12.37□□□□□ -0.43
VTA1-201ENST00000367621 MYH16Q9H6N6 1097 aa12.37□□□□□ -0.43
VTA1-201ENST00000367621 COL5A2P05997 1499 aaPredicted RBP12.37□□□□□ -0.43
VTA1-201ENST00000367621 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
VTA1-201ENST00000367621 IL17REQ8NFR9 667 aa12.36□□□□□ -0.43
VTA1-201ENST00000367621 IFT57Q9NWB7 429 aa12.36□□□□□ -0.43
VTA1-201ENST00000367621 PHLPP1O60346 1717 aa12.35□□□□□ -0.43
VTA1-201ENST00000367621 CSB-PGBD3P0DP91 1061 aa12.35□□□□□ -0.43
VTA1-201ENST00000367621 PLEKHO1Q53GL0 409 aaPredicted RBP12.35□□□□□ -0.43
VTA1-201ENST00000367621 LARP1Q6PKG0 1096 aaKnown RBP12.35□□□□□ -0.43
VTA1-201ENST00000367621 CFAP44Q96MT7 982 aa12.35□□□□□ -0.43
VTA1-201ENST00000367621 FAM208AQ9UK61 1670 aaKnown RBP12.35□□□□□ -0.43
VTA1-201ENST00000367621 MAP3K5Q99683 1374 aa12.34□□□□□ -0.43
VTA1-201ENST00000367621 MEGF6O75095 1541 aa12.34□□□□□ -0.43
VTA1-201ENST00000367621 GNAT3A8MTJ3 354 aa12.34□□□□□ -0.43
VTA1-201ENST00000367621 CHL1O00533 1208 aa12.34□□□□□ -0.43
VTA1-201ENST00000367621 CALD1Q05682 793 aaKnown RBP12.34□□□□□ -0.43
VTA1-201ENST00000367621 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
VTA1-201ENST00000367621 AMOTQ4VCS5 1084 aa12.34□□□□□ -0.43
VTA1-201ENST00000367621 CARD10Q9BWT7 1032 aa12.34□□□□□ -0.43
VTA1-201ENST00000367621 MBIPQ9NS73 344 aa12.34□□□□□ -0.43
VTA1-201ENST00000367621 PLEKHG2Q9H7P9 1386 aa12.33□□□□□ -0.44
VTA1-201ENST00000367621 ECM2O94769 699 aaPredicted RBP12.33□□□□□ -0.44
VTA1-201ENST00000367621 HOXB1P14653 301 aaPredicted RBP12.33□□□□□ -0.44
VTA1-201ENST00000367621 RRP1P56182 461 aaKnown RBP12.33□□□□□ -0.44
VTA1-201ENST00000367621 GNAI1P63096 354 aa12.33□□□□□ -0.44
VTA1-201ENST00000367621 BTG4Q9NY30 223 aa12.33□□□□□ -0.44
VTA1-201ENST00000367621 RGPD2P0DJD1 1756 aa12.33□□□□□ -0.44
VTA1-201ENST00000367621 CEMIPQ8WUJ3 1361 aa12.32□□□□□ -0.44
VTA1-201ENST00000367621 RARSP54136 660 aaKnown RBP12.32□□□□□ -0.44
VTA1-201ENST00000367621 IRX6P78412 446 aaPredicted RBP12.32□□□□□ -0.44
VTA1-201ENST00000367621 AKAP4Q5JQC9 854 aa12.32□□□□□ -0.44
VTA1-201ENST00000367621 ZNF530Q6P9A1 599 aaPredicted RBP12.32□□□□□ -0.44
VTA1-201ENST00000367621 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
VTA1-201ENST00000367621 RGPD5Q99666 1765 aa12.32□□□□□ -0.44
VTA1-201ENST00000367621 JCADQ9P266 1359 aa12.31□□□□□ -0.44
VTA1-201ENST00000367621 BCAR3O75815 825 aa12.31□□□□□ -0.44
VTA1-201ENST00000367621 ADAMTS2O95450 1211 aa12.31□□□□□ -0.44
VTA1-201ENST00000367621 CT47B1P0C2W7 299 aaPredicted RBP12.31□□□□□ -0.44
VTA1-201ENST00000367621 TATP17735 454 aaPredicted RBP12.31□□□□□ -0.44
VTA1-201ENST00000367621 HSPA1LP34931 641 aa12.31□□□□□ -0.44
VTA1-201ENST00000367621 TOM1L2Q6ZVM7 507 aa12.31□□□□□ -0.44
VTA1-201ENST00000367621 RAPGEF4Q8WZA2 1011 aa12.31□□□□□ -0.44
VTA1-201ENST00000367621 RTF1Q92541 710 aaKnown RBP12.31□□□□□ -0.44
VTA1-201ENST00000367621 STRN4Q9NRL3 753 aa12.31□□□□□ -0.44
VTA1-201ENST00000367621 LAS1LQ9Y4W2 734 aaKnown RBP12.31□□□□□ -0.44
VTA1-201ENST00000367621 OVOS2A0A0G2JMS6 1433 aa12.3□□□□□ -0.44
VTA1-201ENST00000367621 NUTM2BA6NNL0 878 aaPredicted RBP12.3□□□□□ -0.44
VTA1-201ENST00000367621 NUTM2EB1AL46 878 aaPredicted RBP12.3□□□□□ -0.44
VTA1-201ENST00000367621 CYP27B1O15528 508 aa12.3□□□□□ -0.44
VTA1-201ENST00000367621 EVA1CP58658 441 aa12.3□□□□□ -0.44
VTA1-201ENST00000367621 DOK7Q18PE1 504 aa12.3□□□□□ -0.44
VTA1-201ENST00000367621 NUTM2AQ8IVF1 878 aaPredicted RBP12.3□□□□□ -0.44
VTA1-201ENST00000367621 TSPYL6Q8N831 410 aa12.3□□□□□ -0.44
VTA1-201ENST00000367621 MIS18AQ9NYP9 233 aa12.3□□□□□ -0.44
VTA1-201ENST00000367621 COL14A1Q05707 1796 aaKnown RBP12.29□□□□□ -0.44
VTA1-201ENST00000367621 RNMTO43148 476 aaKnown RBP12.29□□□□□ -0.44
VTA1-201ENST00000367621 PLIN1O60240 522 aa12.29□□□□□ -0.44
VTA1-201ENST00000367621 VAMP4O75379 141 aa12.29□□□□□ -0.44
VTA1-201ENST00000367621 PHKG2P15735 406 aa12.29□□□□□ -0.44
VTA1-201ENST00000367621 MPRIPQ6WCQ1 1025 aa12.29□□□□□ -0.44
VTA1-201ENST00000367621 C8orf58Q8NAV2 365 aa12.29□□□□□ -0.44
VTA1-201ENST00000367621 SLIT2O94813 1529 aa12.28□□□□□ -0.44
VTA1-201ENST00000367621 NEFLP07196 543 aa12.28□□□□□ -0.44
VTA1-201ENST00000367621 SPG7Q9UQ90 795 aa12.28□□□□□ -0.44
VTA1-201ENST00000367621 LRRC37A3O60309 1634 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms