RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 ANKRD36BQ8N2N9 1353 aa13.54□□□□□ -0.24
RD3-201ENST00000367002 SH2B1Q9NRF2 756 aaPredicted RBP13.54□□□□□ -0.24
RD3-201ENST00000367002 LARP1Q6PKG0 1096 aaKnown RBP13.53□□□□□ -0.24
RD3-201ENST00000367002 C8orf58Q8NAV2 365 aa13.53□□□□□ -0.24
RD3-201ENST00000367002 MPRIPQ6WCQ1 1025 aa13.53□□□□□ -0.24
RD3-201ENST00000367002 TCOF1Q13428 1488 aaKnown RBP13.53□□□□□ -0.24
RD3-201ENST00000367002 ANKLE2Q86XL3 938 aa13.53□□□□□ -0.24
RD3-201ENST00000367002 RBM33Q96EV2 1170 aaKnown RBP13.53□□□□□ -0.24
RD3-201ENST00000367002 FAM177A1Q8N128 213 aaPredicted RBP13.53□□□□□ -0.24
RD3-201ENST00000367002 KCNH5Q8NCM2 988 aa13.53□□□□□ -0.24
RD3-201ENST00000367002 RBM27Q9P2N5 1060 aaKnown RBP13.53□□□□□ -0.24
RD3-201ENST00000367002 NUP160Q12769 1436 aa13.52□□□□□ -0.24
RD3-201ENST00000367002 HSP90AB2PQ58FF8 381 aa13.52□□□□□ -0.24
RD3-201ENST00000367002 SMC5Q8IY18 1101 aa13.52□□□□□ -0.24
RD3-201ENST00000367002 CCP110O43303 1012 aa13.52□□□□□ -0.25
RD3-201ENST00000367002 PPP1R42Q7Z4L9 355 aa13.52□□□□□ -0.25
RD3-201ENST00000367002 ACBD3Q9H3P7 528 aa13.52□□□□□ -0.25
RD3-201ENST00000367002 ECHDC1Q9NTX5 307 aa13.52□□□□□ -0.25
RD3-201ENST00000367002 DBF4Q9UBU7 674 aaPredicted RBP13.52□□□□□ -0.25
RD3-201ENST00000367002 ANKRD44Q8N8A2 993 aa13.52□□□□□ -0.25
RD3-201ENST00000367002 TMX3Q96JJ7 454 aa13.52□□□□□ -0.25
RD3-201ENST00000367002 PRDM11Q9NQV5 511 aa13.52□□□□□ -0.25
RD3-201ENST00000367002 AMOTL2Q9Y2J4 779 aa13.52□□□□□ -0.25
RD3-201ENST00000367002 PI4KAP2A4QPH2 592 aa13.51□□□□□ -0.25
RD3-201ENST00000367002 PI4KAP1Q8N8J0 262 aa13.51□□□□□ -0.25
RD3-201ENST00000367002 NACAP1Q9BZK3 213 aa13.51□□□□□ -0.25
RD3-201ENST00000367002 TFIP11Q9UBB9 837 aaKnown RBP13.51□□□□□ -0.25
RD3-201ENST00000367002 FANCAO15360 1455 aa13.51□□□□□ -0.25
RD3-201ENST00000367002 RNF123Q5XPI4 1314 aa13.51□□□□□ -0.25
RD3-201ENST00000367002 C16orf71Q8IYS4 520 aaPredicted RBP13.51□□□□□ -0.25
RD3-201ENST00000367002 ZBTB40Q9NUA8 1239 aa13.51□□□□□ -0.25
RD3-201ENST00000367002 PTCD1O75127 700 aaKnown RBP13.51□□□□□ -0.25
RD3-201ENST00000367002 OFD1O75665 1012 aa13.51□□□□□ -0.25
RD3-201ENST00000367002 CKAP2LQ8IYA6 745 aa13.51□□□□□ -0.25
RD3-201ENST00000367002 STX6O43752 255 aa13.5□□□□□ -0.25
RD3-201ENST00000367002 TSPYL6Q8N831 410 aa13.5□□□□□ -0.25
RD3-201ENST00000367002 U3KPZ7 1027 aaPredicted RBP13.5□□□□□ -0.25
RD3-201ENST00000367002 PDE1AP54750 535 aa13.5□□□□□ -0.25
RD3-201ENST00000367002 NUP133Q8WUM0 1156 aa13.5□□□□□ -0.25
RD3-201ENST00000367002 MPHOSPH8Q99549 860 aa13.5□□□□□ -0.25
RD3-201ENST00000367002 TRIM34Q9BYJ4 488 aa13.5□□□□□ -0.25
RD3-201ENST00000367002 POLKQ9UBT6 870 aa13.5□□□□□ -0.25
RD3-201ENST00000367002 FOXO3O43524 673 aa13.5□□□□□ -0.25
RD3-201ENST00000367002 VAMP4O75379 141 aa13.5□□□□□ -0.25
RD3-201ENST00000367002 IDH1O75874 414 aaKnown RBP13.5□□□□□ -0.25
RD3-201ENST00000367002 ANXA1P04083 346 aa13.5□□□□□ -0.25
RD3-201ENST00000367002 SNX21Q969T3 373 aa13.5□□□□□ -0.25
RD3-201ENST00000367002 MRPL50Q8N5N7 158 aaKnown RBP13.5□□□□□ -0.25
RD3-201ENST00000367002 RUFY1Q96T51 708 aa13.5□□□□□ -0.25
RD3-201ENST00000367002 TXLNAP40222 546 aa13.49□□□□□ -0.25
RD3-201ENST00000367002 DHX8Q14562 1220 aaKnown RBP13.49□□□□□ -0.25
RD3-201ENST00000367002 ZSCAN25Q6NSZ9 544 aa13.49□□□□□ -0.25
RD3-201ENST00000367002 SMARCE1Q969G3 411 aa13.49□□□□□ -0.25
RD3-201ENST00000367002 MYD88Q99836 296 aa13.49□□□□□ -0.25
RD3-201ENST00000367002 PIK3C2GO75747 1445 aa13.49□□□□□ -0.25
RD3-201ENST00000367002 CCDC69A6NI79 296 aa13.49□□□□□ -0.25
RD3-201ENST00000367002 ACEP12821 1306 aa13.49□□□□□ -0.25
RD3-201ENST00000367002 TTC21BQ7Z4L5 1316 aa13.49□□□□□ -0.25
RD3-201ENST00000367002 KDM5BQ9UGL1 1544 aa13.49□□□□□ -0.25
RD3-201ENST00000367002 CDKL5O76039 1030 aa13.48□□□□□ -0.25
RD3-201ENST00000367002 AMOTQ4VCS5 1084 aa13.48□□□□□ -0.25
RD3-201ENST00000367002 GUCY1B3Q02153 619 aa13.48□□□□□ -0.25
RD3-201ENST00000367002 IMMTQ16891 758 aaKnown RBP13.48□□□□□ -0.25
RD3-201ENST00000367002 ZSCAN23Q3MJ62 389 aa13.48□□□□□ -0.25
RD3-201ENST00000367002 CAGE1Q8TC20 777 aa13.48□□□□□ -0.25
RD3-201ENST00000367002 PPFIBP1Q86W92 1011 aa13.48□□□□□ -0.25
RD3-201ENST00000367002 PDCL2Q8N4E4 241 aa13.48□□□□□ -0.25
RD3-201ENST00000367002 RHPN1Q8TCX5 695 aa13.48□□□□□ -0.25
RD3-201ENST00000367002 PHF8Q9UPP1 1060 aa13.48□□□□□ -0.25
RD3-201ENST00000367002 DMRT2Q9Y5R5 561 aa13.48□□□□□ -0.25
RD3-201ENST00000367002 PHACTR3Q96KR7 559 aa13.47□□□□□ -0.25
RD3-201ENST00000367002 PLCH2O75038 1416 aa13.47□□□□□ -0.25
RD3-201ENST00000367002 PZPP20742 1482 aa13.47□□□□□ -0.25
RD3-201ENST00000367002 HCLS1P14317 486 aaPredicted RBP13.47□□□□□ -0.25
RD3-201ENST00000367002 GJB2P29033 226 aa13.47□□□□□ -0.25
RD3-201ENST00000367002 CLCN1P35523 988 aa13.47□□□□□ -0.25
RD3-201ENST00000367002 CFAP100Q494V2 611 aa13.47□□□□□ -0.25
RD3-201ENST00000367002 IFIT1P09914 478 aaKnown RBP13.47□□□□□ -0.25
RD3-201ENST00000367002 EVI5LQ96CN4 794 aa13.47□□□□□ -0.25
RD3-201ENST00000367002 DCTPP1Q9H773 170 aa13.47□□□□□ -0.25
RD3-201ENST00000367002 CCDC66A2RUB6 948 aa13.46□□□□□ -0.25
RD3-201ENST00000367002 PIP4K2AP48426 406 aaPredicted RBP13.46□□□□□ -0.25
RD3-201ENST00000367002 TDO2P48775 406 aa13.46□□□□□ -0.25
RD3-201ENST00000367002 KRT24Q2M2I5 525 aa13.46□□□□□ -0.25
RD3-201ENST00000367002 GNL3LQ9NVN8 582 aaKnown RBP13.46□□□□□ -0.25
RD3-201ENST00000367002 SETQ01105 290 aaPredicted RBP13.46□□□□□ -0.25
RD3-201ENST00000367002 AK7Q96M32 723 aa13.46□□□□□ -0.25
RD3-201ENST00000367002 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.25
RD3-201ENST00000367002 A0A087WZG4 1122 aa13.46□□□□□ -0.26
RD3-201ENST00000367002 ADCY5O95622 1261 aa13.46□□□□□ -0.26
RD3-201ENST00000367002 SLC3A2P08195 630 aaKnown RBP13.46□□□□□ -0.26
RD3-201ENST00000367002 SFPQP23246 707 aaKnown RBP eCLIP13.46□□□□□ -0.26
RD3-201ENST00000367002 SAMD1Q6SPF0 538 aaPredicted RBP13.46□□□□□ -0.26
RD3-201ENST00000367002 ANO10Q9NW15 660 aa13.46□□□□□ -0.26
RD3-201ENST00000367002 DACH1Q9UI36 760 aa13.46□□□□□ -0.26
RD3-201ENST00000367002 RAPGEF6Q8TEU7 1601 aa13.46□□□□□ -0.26
RD3-201ENST00000367002 CBFA2T2O43439 604 aa13.45□□□□□ -0.26
RD3-201ENST00000367002 CEBPAP49715 358 aaPredicted RBP13.45□□□□□ -0.26
RD3-201ENST00000367002 UBAC1Q9BSL1 405 aa13.45□□□□□ -0.26
RD3-201ENST00000367002 HYPKQ9NX55 129 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms