RNA–Protein interactions for RNA: ENST00000366522.6

EFCAB2-202, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 2 BASIC

Gene EFCAB2, Length 6,167 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-202ENST00000366522 PAIP2Q9BPZ3 127 aaKnown RBP17.13■□□□□ 0.33
EFCAB2-202ENST00000366522 CYP46A1Q9Y6A2 500 aa17.13■□□□□ 0.33
EFCAB2-202ENST00000366522 USP5P45974 858 aa17.13■□□□□ 0.33
EFCAB2-202ENST00000366522 SPATA32Q96LK8 384 aa17.13■□□□□ 0.33
EFCAB2-202ENST00000366522 LARP6Q9BRS8 491 aaKnown RBP17.13■□□□□ 0.33
EFCAB2-202ENST00000366522 FYCO1Q9BQS8 1478 aa17.12■□□□□ 0.33
EFCAB2-202ENST00000366522 FKBP4Q02790 459 aaKnown RBP eCLIP17.12■□□□□ 0.33
EFCAB2-202ENST00000366522 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
EFCAB2-202ENST00000366522 MCM5P33992 734 aa17.12■□□□□ 0.33
EFCAB2-202ENST00000366522 KRT85P78386 507 aa17.12■□□□□ 0.33
EFCAB2-202ENST00000366522 RRBP1Q9P2E9 1410 aaKnown RBP17.12■□□□□ 0.33
EFCAB2-202ENST00000366522 TMCO5BA8MYB1 307 aa17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 KIF5CO60282 957 aa17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 LMAN1P49257 510 aa17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 BRD4O60885 1362 aaPredicted RBP17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 FAM114A1Q8IWE2 563 aa17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 NUP62CLQ9H1M0 184 aa17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 LRP2BPQ9P2M1 347 aa17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 HSPA4P34932 840 aa17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 CCT4P50991 539 aaKnown RBP17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 IFFO1Q0D2I5 559 aa17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 IMMTQ16891 758 aaKnown RBP17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 FERMT3Q86UX7 667 aa17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 ANKLE2Q86XL3 938 aa17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 FEZ1Q99689 392 aa17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 FANCD2Q9BXW9 1451 aa17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 UPF3BQ9BZI7 483 aaKnown RBP17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 CCDC113Q9H0I3 377 aa17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 ZNF287Q9HBT7 754 aa17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 PRDM2Q13029 1718 aa17.11■□□□□ 0.33
EFCAB2-202ENST00000366522 CHD1LQ86WJ1 897 aa17.1■□□□□ 0.33
EFCAB2-202ENST00000366522 IL1RAPL2Q9NP60 686 aa17.1■□□□□ 0.33
EFCAB2-202ENST00000366522 JAKMIP1Q96N16 626 aaKnown RBP17.1■□□□□ 0.33
EFCAB2-202ENST00000366522 ZNF652Q9Y2D9 606 aa17.1■□□□□ 0.33
EFCAB2-202ENST00000366522 CRACR2BQ8N4Y2 399 aaPredicted RBP17.1■□□□□ 0.33
EFCAB2-202ENST00000366522 TTC31Q49AM3 519 aaPredicted RBP17.1■□□□□ 0.33
EFCAB2-202ENST00000366522 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
EFCAB2-202ENST00000366522 ZNF692Q9BU19 519 aaPredicted RBP17.1■□□□□ 0.33
EFCAB2-202ENST00000366522 SMARCA5O60264 1052 aaPredicted RBP17.09■□□□□ 0.33
EFCAB2-202ENST00000366522 TRMT1Q9NXH9 659 aaKnown RBP17.09■□□□□ 0.33
EFCAB2-202ENST00000366522 ZPR1O75312 459 aa17.09■□□□□ 0.33
EFCAB2-202ENST00000366522 CTNNA3Q9UI47 895 aa17.09■□□□□ 0.33
EFCAB2-202ENST00000366522 PRIMPOLQ96LW4 560 aa17.09■□□□□ 0.33
EFCAB2-202ENST00000366522 PRAM1Q96QH2 718 aa17.09■□□□□ 0.33
EFCAB2-202ENST00000366522 SRCIN1Q9C0H9 1055 aa17.09■□□□□ 0.33
EFCAB2-202ENST00000366522 DNA2P51530 1060 aa17.09■□□□□ 0.33
EFCAB2-202ENST00000366522 ZNF397Q8NF99 534 aaPredicted RBP17.09■□□□□ 0.33
EFCAB2-202ENST00000366522 PDRG1Q9NUG6 133 aa17.09■□□□□ 0.33
EFCAB2-202ENST00000366522 ARHGAP5Q13017 1502 aa17.09■□□□□ 0.33
EFCAB2-202ENST00000366522 KRT222Q8N1A0 295 aa17.08■□□□□ 0.33
EFCAB2-202ENST00000366522 SRRTQ9BXP5 876 aaKnown RBP17.08■□□□□ 0.33
EFCAB2-202ENST00000366522 WASF1Q92558 559 aa17.08■□□□□ 0.33
EFCAB2-202ENST00000366522 C20orf194Q5TEA3 1177 aa17.08■□□□□ 0.32
EFCAB2-202ENST00000366522 RBM28Q9NW13 759 aaKnown RBP17.08■□□□□ 0.32
EFCAB2-202ENST00000366522 STARD3NLO95772 234 aa17.08■□□□□ 0.32
EFCAB2-202ENST00000366522 SARNPP82979 210 aaKnown RBP17.08■□□□□ 0.32
EFCAB2-202ENST00000366522 NUTM1Q86Y26 1132 aa17.08■□□□□ 0.32
EFCAB2-202ENST00000366522 GCC1Q96CN9 775 aa17.08■□□□□ 0.32
EFCAB2-202ENST00000366522 PPP1R12BO60237 982 aaPredicted RBP17.08■□□□□ 0.32
EFCAB2-202ENST00000366522 CETN2P41208 172 aa17.07■□□□□ 0.32
EFCAB2-202ENST00000366522 NEMFO60524 1076 aa17.07■□□□□ 0.32
EFCAB2-202ENST00000366522 CEP126Q9P2H0 1117 aa17.07■□□□□ 0.32
EFCAB2-202ENST00000366522 SEC63Q9UGP8 760 aaKnown RBP17.07■□□□□ 0.32
EFCAB2-202ENST00000366522 CCDC83Q8IWF9 413 aa17.07■□□□□ 0.32
EFCAB2-202ENST00000366522 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.07■□□□□ 0.32
EFCAB2-202ENST00000366522 V9GYY5 206 aaPredicted RBP17.07■□□□□ 0.32
EFCAB2-202ENST00000366522 URI1O94763 535 aaPredicted RBP17.07■□□□□ 0.32
EFCAB2-202ENST00000366522 SWAP70Q9UH65 585 aa17.07■□□□□ 0.32
EFCAB2-202ENST00000366522 ANAPC15P60006 121 aa17.06■□□□□ 0.32
EFCAB2-202ENST00000366522 PDIA4P13667 645 aaKnown RBP17.06■□□□□ 0.32
EFCAB2-202ENST00000366522 BTBD11A6QL63 1104 aa17.06■□□□□ 0.32
EFCAB2-202ENST00000366522 WDR78Q5VTH9 848 aa17.06■□□□□ 0.32
EFCAB2-202ENST00000366522 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
EFCAB2-202ENST00000366522 POLR3DP05423 398 aaPredicted RBP17.06■□□□□ 0.32
EFCAB2-202ENST00000366522 DDX23Q9BUQ8 820 aaKnown RBP17.06■□□□□ 0.32
EFCAB2-202ENST00000366522 CASTP20810 708 aaKnown RBP17.06■□□□□ 0.32
EFCAB2-202ENST00000366522 SSFA2P28290 1259 aa17.06■□□□□ 0.32
EFCAB2-202ENST00000366522 SULT6B1Q6IMI4 303 aa17.06■□□□□ 0.32
EFCAB2-202ENST00000366522 SFPQP23246 707 aaKnown RBP eCLIP17.05■□□□□ 0.32
EFCAB2-202ENST00000366522 DDX46Q7L014 1031 aaKnown RBP17.05■□□□□ 0.32
EFCAB2-202ENST00000366522 AACSQ86V21 672 aa17.05■□□□□ 0.32
EFCAB2-202ENST00000366522 GDPD2Q9HCC8 539 aa17.05■□□□□ 0.32
EFCAB2-202ENST00000366522 MAP3K11Q16584 847 aa17.05■□□□□ 0.32
EFCAB2-202ENST00000366522 RBM27Q9P2N5 1060 aaKnown RBP17.05■□□□□ 0.32
EFCAB2-202ENST00000366522 MVPQ14764 893 aaKnown RBP17.04■□□□□ 0.32
EFCAB2-202ENST00000366522 DRC1Q96MC2 740 aa17.04■□□□□ 0.32
EFCAB2-202ENST00000366522 C16orf45Q96MC5 204 aaPredicted RBP17.04■□□□□ 0.32
EFCAB2-202ENST00000366522 NAP1L3Q99457 506 aaPredicted RBP17.04■□□□□ 0.32
EFCAB2-202ENST00000366522 CDK19Q9BWU1 502 aa17.04■□□□□ 0.32
EFCAB2-202ENST00000366522 SPA17Q15506 151 aa17.04■□□□□ 0.32
EFCAB2-202ENST00000366522 MSL1Q68DK7 614 aa17.04■□□□□ 0.32
EFCAB2-202ENST00000366522 POGZQ7Z3K3 1410 aa17.04■□□□□ 0.32
EFCAB2-202ENST00000366522 CAVIN4Q5BKX8 364 aa17.04■□□□□ 0.32
EFCAB2-202ENST00000366522 CFAP100Q494V2 611 aa17.04■□□□□ 0.32
EFCAB2-202ENST00000366522 GUCY1B3Q02153 619 aa17.04■□□□□ 0.32
EFCAB2-202ENST00000366522 UBE4AQ14139 1066 aa17.04■□□□□ 0.32
EFCAB2-202ENST00000366522 PAXBP1Q9Y5B6 917 aa17.04■□□□□ 0.32
EFCAB2-202ENST00000366522 AIDAQ96BJ3 306 aa17.03■□□□□ 0.32
EFCAB2-202ENST00000366522 CEP131Q9UPN4 1083 aa17.03■□□□□ 0.32
EFCAB2-202ENST00000366522 KIF4BQ2VIQ3 1234 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms