RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 PCF11O94913 1555 aaKnown RBP12.34□□□□□ -0.43
YBX3-204ENST00000366290 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
YBX3-204ENST00000366290 FYCO1Q9BQS8 1478 aa12.34□□□□□ -0.43
YBX3-204ENST00000366290 TTC24A2A3L6 582 aaPredicted RBP12.33□□□□□ -0.44
YBX3-204ENST00000366290 NBPF20Q3BBV1 942 aa12.33□□□□□ -0.44
YBX3-204ENST00000366290 CDCA8Q53HL2 280 aa12.33□□□□□ -0.44
YBX3-204ENST00000366290 PLEKHM2Q8IWE5 1019 aa12.33□□□□□ -0.44
YBX3-204ENST00000366290 PLPP7Q8NBV4 271 aa12.33□□□□□ -0.44
YBX3-204ENST00000366290 CHIC2Q9UKJ5 165 aa12.33□□□□□ -0.44
YBX3-204ENST00000366290 CDV3Q9UKY7 258 aaKnown RBP12.33□□□□□ -0.44
YBX3-204ENST00000366290 CDK11AQ9UQ88 783 aaPredicted RBP12.33□□□□□ -0.44
YBX3-204ENST00000366290 TTC37Q6PGP7 1564 aa12.33□□□□□ -0.44
YBX3-204ENST00000366290 J3QL48 77 aa12.32□□□□□ -0.44
YBX3-204ENST00000366290 SIAH2O43255 324 aa12.32□□□□□ -0.44
YBX3-204ENST00000366290 DEPDC4Q8N2C3 294 aa12.32□□□□□ -0.44
YBX3-204ENST00000366290 EHBP1Q8NDI1 1231 aa12.32□□□□□ -0.44
YBX3-204ENST00000366290 TROQ12816 1431 aaPredicted RBP12.31□□□□□ -0.44
YBX3-204ENST00000366290 ST8SIA5O15466 376 aa12.31□□□□□ -0.44
YBX3-204ENST00000366290 RAPGEF3O95398 923 aa12.31□□□□□ -0.44
YBX3-204ENST00000366290 PDIA4P13667 645 aaKnown RBP12.31□□□□□ -0.44
YBX3-204ENST00000366290 CRIPAKQ8N1N5 446 aa12.31□□□□□ -0.44
YBX3-204ENST00000366290 AAASQ9NRG9 546 aa12.31□□□□□ -0.44
YBX3-204ENST00000366290 CFAP74Q9C0B2 1584 aa12.3□□□□□ -0.44
YBX3-204ENST00000366290 MAP7D1Q3KQU3 841 aa12.3□□□□□ -0.44
YBX3-204ENST00000366290 KANK4Q5T7N3 995 aaPredicted RBP12.3□□□□□ -0.44
YBX3-204ENST00000366290 CCDC85AQ96PX6 553 aaPredicted RBP12.3□□□□□ -0.44
YBX3-204ENST00000366290 VRTNQ9H8Y1 702 aa12.3□□□□□ -0.44
YBX3-204ENST00000366290 PLCH2O75038 1416 aa12.29□□□□□ -0.44
YBX3-204ENST00000366290 CEP162Q5TB80 1403 aa12.29□□□□□ -0.44
YBX3-204ENST00000366290 ESPNB1AK53 854 aa12.29□□□□□ -0.44
YBX3-204ENST00000366290 NCOA4Q13772 614 aa12.29□□□□□ -0.44
YBX3-204ENST00000366290 TSGA10IPQ3SY00 556 aa12.29□□□□□ -0.44
YBX3-204ENST00000366290 RNF20Q5VTR2 975 aa12.29□□□□□ -0.44
YBX3-204ENST00000366290 KIF14Q15058 1648 aa12.29□□□□□ -0.44
YBX3-204ENST00000366290 FANCAO15360 1455 aa12.28□□□□□ -0.44
YBX3-204ENST00000366290 LZTS3O60299 673 aaPredicted RBP12.28□□□□□ -0.44
YBX3-204ENST00000366290 KCTD15Q96SI1 283 aaPredicted RBP12.28□□□□□ -0.44
YBX3-204ENST00000366290 MAP4K5Q9Y4K4 846 aa12.28□□□□□ -0.44
YBX3-204ENST00000366290 ADAMTSL3P82987 1691 aa12.28□□□□□ -0.44
YBX3-204ENST00000366290 FRMPD1Q5SYB0 1578 aa12.27□□□□□ -0.44
YBX3-204ENST00000366290 ATG7O95352 703 aa12.27□□□□□ -0.45
YBX3-204ENST00000366290 DOLKQ9UPQ8 538 aa12.27□□□□□ -0.45
YBX3-204ENST00000366290 MYO5CQ9NQX4 1742 aa12.27□□□□□ -0.45
YBX3-204ENST00000366290 AKNAQ7Z591 1439 aa12.27□□□□□ -0.45
YBX3-204ENST00000366290 RICTORQ6R327 1708 aa12.26□□□□□ -0.45
YBX3-204ENST00000366290 EML3Q32P44 896 aa12.26□□□□□ -0.45
YBX3-204ENST00000366290 VASH1Q7L8A9 365 aaPredicted RBP12.26□□□□□ -0.45
YBX3-204ENST00000366290 SEPT12Q8IYM1 358 aa12.26□□□□□ -0.45
YBX3-204ENST00000366290 MKRN1Q9UHC7 482 aaKnown RBP12.26□□□□□ -0.45
YBX3-204ENST00000366290 PTPRMP28827 1452 aa12.26□□□□□ -0.45
YBX3-204ENST00000366290 SMCPP49901 116 aaPredicted RBP12.25□□□□□ -0.45
YBX3-204ENST00000366290 DENND4BO75064 1496 aaPredicted RBP12.24□□□□□ -0.45
YBX3-204ENST00000366290 ALDH1A1P00352 501 aa12.24□□□□□ -0.45
YBX3-204ENST00000366290 CSB-PGBD3P0DP91 1061 aa12.24□□□□□ -0.45
YBX3-204ENST00000366290 RAB15P59190 212 aa12.24□□□□□ -0.45
YBX3-204ENST00000366290 ARID5BQ14865 1188 aa12.24□□□□□ -0.45
YBX3-204ENST00000366290 CTC1Q2NKJ3 1217 aa12.24□□□□□ -0.45
YBX3-204ENST00000366290 TRAIPQ9BWF2 469 aa12.24□□□□□ -0.45
YBX3-204ENST00000366290 DACH1Q9UI36 760 aa12.24□□□□□ -0.45
YBX3-204ENST00000366290 ZMYM4Q5VZL5 1548 aa12.23□□□□□ -0.45
YBX3-204ENST00000366290 ATP5J2-PTCD1G3V325 749 aa12.23□□□□□ -0.45
YBX3-204ENST00000366290 OXLD1Q5BKU9 147 aa12.23□□□□□ -0.45
YBX3-204ENST00000366290 CCDC125Q86Z20 511 aa12.23□□□□□ -0.45
YBX3-204ENST00000366290 HPS1Q92902 700 aa12.23□□□□□ -0.45
YBX3-204ENST00000366290 CDK15Q96Q40 435 aa12.23□□□□□ -0.45
YBX3-204ENST00000366290 PCDHB11Q9Y5F2 797 aa12.23□□□□□ -0.45
YBX3-204ENST00000366290 TLL2Q9Y6L7 1015 aa12.23□□□□□ -0.45
YBX3-204ENST00000366290 INTS6LQ5JSJ4 861 aaKnown RBP12.22□□□□□ -0.45
YBX3-204ENST00000366290 CDCA7Q9BWT1 371 aaPredicted RBP12.22□□□□□ -0.45
YBX3-204ENST00000366290 NOD1Q9Y239 953 aa12.22□□□□□ -0.45
YBX3-204ENST00000366290 CDC42BPBQ9Y5S2 1711 aa12.22□□□□□ -0.45
YBX3-204ENST00000366290 BCORL1Q5H9F3 1711 aa12.21□□□□□ -0.45
YBX3-204ENST00000366290 POTECB2RU33 542 aa12.21□□□□□ -0.45
YBX3-204ENST00000366290 AXIN1O15169 862 aa12.21□□□□□ -0.45
YBX3-204ENST00000366290 PDE4CQ08493 712 aa12.21□□□□□ -0.45
YBX3-204ENST00000366290 EFCAB2Q5VUJ9 269 aa12.21□□□□□ -0.45
YBX3-204ENST00000366290 MPNDQ8N594 471 aa12.21□□□□□ -0.45
YBX3-204ENST00000366290 USTQ9Y2C2 406 aa12.21□□□□□ -0.45
YBX3-204ENST00000366290 PREX2Q70Z35 1606 aa12.21□□□□□ -0.46
YBX3-204ENST00000366290 FAM196BA6NMK8 535 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 USP17L15C9J2P7 530 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 USP17L10C9JJH3 530 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 USP17L13C9JLJ4 530 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 USP17L12C9JPN9 530 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 USP17L11C9JVI0 530 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 USP17L21D6R901 530 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 USP17L18D6R9N7 530 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 USP17L22D6RA61 530 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 USP17L17D6RBQ6 530 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 USP17L19D6RCP7 530 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 USP17L20D6RJB6 530 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 RASA1P20936 1047 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 USP17L24Q0WX57 530 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 ELOAQ14241 798 aaKnown RBP12.2□□□□□ -0.46
YBX3-204ENST00000366290 CRTC2Q53ET0 693 aaPredicted RBP12.2□□□□□ -0.46
YBX3-204ENST00000366290 ZNF787Q6DD87 383 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 ARHGEF40Q8TER5 1519 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 MAGI2Q86UL8 1455 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 CDC42BPAQ5VT25 1732 aa12.2□□□□□ -0.46
YBX3-204ENST00000366290 POGZQ7Z3K3 1410 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms