RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 INHAP05111 366 aa9.43□□□□□ -0.9
RNU4-28P-201ENST00000364739 CLDN10P78369 228 aa9.43□□□□□ -0.9
RNU4-28P-201ENST00000364739 PLEKHM2Q8IWE5 1019 aa9.43□□□□□ -0.9
RNU4-28P-201ENST00000364739 CCDC155Q8N6L0 562 aa9.43□□□□□ -0.9
RNU4-28P-201ENST00000364739 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.43□□□□□ -0.9
RNU4-28P-201ENST00000364739 LOC100996750A0A140TA64 210 aa9.42□□□□□ -0.9
RNU4-28P-201ENST00000364739 SLC35F4A4IF30 521 aa9.42□□□□□ -0.9
RNU4-28P-201ENST00000364739 ZBTB7BO15156 539 aaPredicted RBP9.42□□□□□ -0.9
RNU4-28P-201ENST00000364739 RFX1P22670 979 aa9.42□□□□□ -0.9
RNU4-28P-201ENST00000364739 GPC1P35052 558 aa9.42□□□□□ -0.9
RNU4-28P-201ENST00000364739 PHKA2P46019 1235 aa9.42□□□□□ -0.9
RNU4-28P-201ENST00000364739 ESCO1Q5FWF5 840 aa9.42□□□□□ -0.9
RNU4-28P-201ENST00000364739 KRTAP4-6Q9BYQ5 205 aa9.42□□□□□ -0.9
RNU4-28P-201ENST00000364739 KCNMA1Q12791 1236 aa9.41□□□□□ -0.9
RNU4-28P-201ENST00000364739 CDCA8Q53HL2 280 aa9.41□□□□□ -0.9
RNU4-28P-201ENST00000364739 ZSCAN10Q96SZ4 725 aaPredicted RBP9.41□□□□□ -0.9
RNU4-28P-201ENST00000364739 FHDC1Q9C0D6 1143 aaPredicted RBP9.41□□□□□ -0.9
RNU4-28P-201ENST00000364739 TLR1Q15399 786 aa9.4□□□□□ -0.9
RNU4-28P-201ENST00000364739 OGFOD1Q8N543 542 aa9.4□□□□□ -0.9
RNU4-28P-201ENST00000364739 ZNF594Q96JF6 807 aaPredicted RBP9.4□□□□□ -0.9
RNU4-28P-201ENST00000364739 CFAP70Q5T0N1 1121 aa9.39□□□□□ -0.91
RNU4-28P-201ENST00000364739 TMEM214Q6NUQ4 689 aaKnown RBP9.39□□□□□ -0.91
RNU4-28P-201ENST00000364739 NBPF10Q6P3W6 841 aaKnown RBP9.39□□□□□ -0.91
RNU4-28P-201ENST00000364739 NBPF15Q8N660 670 aa9.39□□□□□ -0.91
RNU4-28P-201ENST00000364739 TPCN2Q8NHX9 752 aa9.39□□□□□ -0.91
RNU4-28P-201ENST00000364739 DNAAF2Q9NVR5 837 aaKnown RBP9.39□□□□□ -0.91
RNU4-28P-201ENST00000364739 KANK4Q5T7N3 995 aaPredicted RBP9.38□□□□□ -0.91
RNU4-28P-201ENST00000364739 CCDC102BQ68D86 513 aa9.38□□□□□ -0.91
RNU4-28P-201ENST00000364739 ZNF358Q9NW07 568 aa9.38□□□□□ -0.91
RNU4-28P-201ENST00000364739 CUEDC1Q9NWM3 386 aaPredicted RBP9.38□□□□□ -0.91
RNU4-28P-201ENST00000364739 USP3Q9Y6I4 520 aa9.38□□□□□ -0.91
RNU4-28P-201ENST00000364739 WASLO00401 505 aaPredicted RBP9.37□□□□□ -0.91
RNU4-28P-201ENST00000364739 RASA1P20936 1047 aa9.37□□□□□ -0.91
RNU4-28P-201ENST00000364739 SMTNP53814 917 aa9.37□□□□□ -0.91
RNU4-28P-201ENST00000364739 TRIM50Q86XT4 487 aa9.37□□□□□ -0.91
RNU4-28P-201ENST00000364739 GAS2L1Q99501 681 aaPredicted RBP9.37□□□□□ -0.91
RNU4-28P-201ENST00000364739 SFI1A8K8P3 1242 aa9.36□□□□□ -0.91
RNU4-28P-201ENST00000364739 SPATA31C2B4DYI2 1134 aa9.36□□□□□ -0.91
RNU4-28P-201ENST00000364739 CRTC2Q53ET0 693 aaPredicted RBP9.36□□□□□ -0.91
RNU4-28P-201ENST00000364739 C4orf17Q53FE4 359 aa9.36□□□□□ -0.91
RNU4-28P-201ENST00000364739 TAS1R3Q7RTX0 852 aa9.36□□□□□ -0.91
RNU4-28P-201ENST00000364739 TNS4Q8IZW8 715 aa9.36□□□□□ -0.91
RNU4-28P-201ENST00000364739 VWA5B2Q8N398 1253 aa9.36□□□□□ -0.91
RNU4-28P-201ENST00000364739 GPR161Q8N6U8 529 aaKnown RBP9.36□□□□□ -0.91
RNU4-28P-201ENST00000364739 TIMMDC1Q9NPL8 285 aa9.36□□□□□ -0.91
RNU4-28P-201ENST00000364739 A6NJY4 79 aa9.35□□□□□ -0.91
RNU4-28P-201ENST00000364739 LGR5O75473 907 aa9.35□□□□□ -0.91
RNU4-28P-201ENST00000364739 ITGA6P23229 1130 aa9.35□□□□□ -0.91
RNU4-28P-201ENST00000364739 ATP1A2P50993 1020 aa9.35□□□□□ -0.91
RNU4-28P-201ENST00000364739 TBCELQ5QJ74 424 aa9.35□□□□□ -0.91
RNU4-28P-201ENST00000364739 RIPOR1Q6ZS17 1223 aa9.35□□□□□ -0.91
RNU4-28P-201ENST00000364739 PPARGC1BQ86YN6 1023 aaKnown RBP9.35□□□□□ -0.91
RNU4-28P-201ENST00000364739 SLC4A9Q96Q91 983 aa9.35□□□□□ -0.91
RNU4-28P-201ENST00000364739 VRTNQ9H8Y1 702 aa9.35□□□□□ -0.91
RNU4-28P-201ENST00000364739 CDC14CA4D256 554 aa9.34□□□□□ -0.91
RNU4-28P-201ENST00000364739 DKK1O94907 266 aa9.34□□□□□ -0.91
RNU4-28P-201ENST00000364739 GTF2E1P29083 439 aaPredicted RBP9.34□□□□□ -0.91
RNU4-28P-201ENST00000364739 GSK3AP49840 483 aa9.34□□□□□ -0.91
RNU4-28P-201ENST00000364739 C1orf115Q9H7X2 142 aa9.34□□□□□ -0.91
RNU4-28P-201ENST00000364739 GNASQ5JWF2 1037 aa9.33□□□□□ -0.92
RNU4-28P-201ENST00000364739 LARGE2Q8N3Y3 721 aa9.33□□□□□ -0.92
RNU4-28P-201ENST00000364739 GPAMQ9HCL2 828 aa9.33□□□□□ -0.92
RNU4-28P-201ENST00000364739 PARP3Q9Y6F1 533 aa9.33□□□□□ -0.92
RNU4-28P-201ENST00000364739 DBN1Q16643 649 aa9.32□□□□□ -0.92
RNU4-28P-201ENST00000364739 LARP1Q6PKG0 1096 aaKnown RBP9.32□□□□□ -0.92
RNU4-28P-201ENST00000364739 TSEN2Q8NCE0 465 aaKnown RBP9.32□□□□□ -0.92
RNU4-28P-201ENST00000364739 RHBDD1Q8TEB9 315 aa9.32□□□□□ -0.92
RNU4-28P-201ENST00000364739 TIMELESSQ9UNS1 1208 aa9.32□□□□□ -0.92
RNU4-28P-201ENST00000364739 IQSEC3Q9UPP2 1182 aaPredicted RBP9.32□□□□□ -0.92
RNU4-28P-201ENST00000364739 DYRK1BQ9Y463 629 aa9.32□□□□□ -0.92
RNU4-28P-201ENST00000364739 RNF225M0QZC1 329 aaPredicted RBP9.31□□□□□ -0.92
RNU4-28P-201ENST00000364739 BACH1O14867 736 aa9.31□□□□□ -0.92
RNU4-28P-201ENST00000364739 PLA2G4AP47712 749 aa9.31□□□□□ -0.92
RNU4-28P-201ENST00000364739 KRT76Q01546 638 aa9.31□□□□□ -0.92
RNU4-28P-201ENST00000364739 PTK7Q13308 1070 aa9.31□□□□□ -0.92
RNU4-28P-201ENST00000364739 SUZ12Q15022 739 aaKnown RBP9.31□□□□□ -0.92
RNU4-28P-201ENST00000364739 MTFR1Q15390 333 aa9.31□□□□□ -0.92
RNU4-28P-201ENST00000364739 GAS2L2Q8NHY3 880 aa9.31□□□□□ -0.92
RNU4-28P-201ENST00000364739 AIDAQ96BJ3 306 aa9.31□□□□□ -0.92
RNU4-28P-201ENST00000364739 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.3□□□□□ -0.92
RNU4-28P-201ENST00000364739 CDK2AP1O14519 115 aa9.3□□□□□ -0.92
RNU4-28P-201ENST00000364739 EPHA4P54764 986 aa9.3□□□□□ -0.92
RNU4-28P-201ENST00000364739 DPYDQ12882 1025 aa9.3□□□□□ -0.92
RNU4-28P-201ENST00000364739 WDR44Q5JSH3 913 aa9.3□□□□□ -0.92
RNU4-28P-201ENST00000364739 SIX5Q8N196 739 aa9.3□□□□□ -0.92
RNU4-28P-201ENST00000364739 TMEM151AQ8N4L1 468 aa9.3□□□□□ -0.92
RNU4-28P-201ENST00000364739 NANOS1Q8WY41 292 aaKnown RBP9.3□□□□□ -0.92
RNU4-28P-201ENST00000364739 CABP1Q9NZU7 370 aa9.3□□□□□ -0.92
RNU4-28P-201ENST00000364739 SCHIP1Q9P0W5 487 aaPredicted RBP9.3□□□□□ -0.92
RNU4-28P-201ENST00000364739 USP17L15C9J2P7 530 aa9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 USP17L10C9JJH3 530 aa9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 USP17L13C9JLJ4 530 aa9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 USP17L12C9JPN9 530 aa9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 USP17L11C9JVI0 530 aa9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 USP17L21D6R901 530 aa9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 USP17L18D6R9N7 530 aa9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 USP17L22D6RA61 530 aa9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 USP17L17D6RBQ6 530 aa9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 USP17L19D6RCP7 530 aa9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 USP17L20D6RJB6 530 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms