RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 SCTRP47872 440 aa8.89□□□□□ -0.99
RNU4-4P-201ENST00000364588 PHTF2Q8N3S3 785 aa8.89□□□□□ -0.99
RNU4-4P-201ENST00000364588 INSM2Q96T92 566 aaPredicted RBP8.89□□□□□ -0.99
RNU4-4P-201ENST00000364588 DNMT3LQ9UJW3 386 aa8.89□□□□□ -0.99
RNU4-4P-201ENST00000364588 CHIC2Q9UKJ5 165 aa8.89□□□□□ -0.99
RNU4-4P-201ENST00000364588 TRAK2O60296 914 aa8.88□□□□□ -0.99
RNU4-4P-201ENST00000364588 NFATC2IPQ8NCF5 419 aa8.88□□□□□ -0.99
RNU4-4P-201ENST00000364588 CLUAP1Q96AJ1 413 aa8.88□□□□□ -0.99
RNU4-4P-201ENST00000364588 OSBPL3Q9H4L5 887 aa8.88□□□□□ -0.99
RNU4-4P-201ENST00000364588 ALG2Q9H553 416 aa8.88□□□□□ -0.99
RNU4-4P-201ENST00000364588 ZNF395Q9H8N7 513 aaPredicted RBP8.88□□□□□ -0.99
RNU4-4P-201ENST00000364588 NXF1Q9UBU9 619 aaKnown RBP8.88□□□□□ -0.99
RNU4-4P-201ENST00000364588 ABCC2Q92887 1545 aa8.87□□□□□ -0.99
RNU4-4P-201ENST00000364588 A6NJR5 290 aa8.87□□□□□ -0.99
RNU4-4P-201ENST00000364588 TERTO14746 1132 aaKnown RBP8.87□□□□□ -0.99
RNU4-4P-201ENST00000364588 USP4Q13107 963 aa8.87□□□□□ -0.99
RNU4-4P-201ENST00000364588 KDF1Q8NAX2 398 aaPredicted RBP8.87□□□□□ -0.99
RNU4-4P-201ENST00000364588 PLPP7Q8NBV4 271 aa8.87□□□□□ -0.99
RNU4-4P-201ENST00000364588 SLC16A10Q8TF71 515 aa8.87□□□□□ -0.99
RNU4-4P-201ENST00000364588 ASXL2Q76L83 1435 aa8.87□□□□□ -0.99
RNU4-4P-201ENST00000364588 DISP1Q96F81 1524 aa8.86□□□□□ -0.99
RNU4-4P-201ENST00000364588 SOBPA7XYQ1 873 aa8.86□□□□□ -0.99
RNU4-4P-201ENST00000364588 GNRH1P01148 92 aa8.86□□□□□ -0.99
RNU4-4P-201ENST00000364588 GPC1P35052 558 aa8.86□□□□□ -0.99
RNU4-4P-201ENST00000364588 CTSOP43234 321 aaPredicted RBP8.86□□□□□ -0.99
RNU4-4P-201ENST00000364588 OXLD1Q5BKU9 147 aa8.86□□□□□ -0.99
RNU4-4P-201ENST00000364588 RNF217Q8TC41 542 aa8.86□□□□□ -0.99
RNU4-4P-201ENST00000364588 RAPGEF2Q9Y4G8 1499 aa8.85□□□□□ -0.99
RNU4-4P-201ENST00000364588 POM121CA8CG34 1229 aa8.85□□□□□ -0.99
RNU4-4P-201ENST00000364588 WFS1O76024 890 aa8.85□□□□□ -0.99
RNU4-4P-201ENST00000364588 CLN3Q13286 438 aa8.85□□□□□ -0.99
RNU4-4P-201ENST00000364588 CDCA7Q9BWT1 371 aaPredicted RBP8.85□□□□□ -0.99
RNU4-4P-201ENST00000364588 ARHGEF10LQ9HCE6 1279 aa8.85□□□□□ -0.99
RNU4-4P-201ENST00000364588 PPRC1Q5VV67 1664 aaKnown RBP8.85□□□□□ -0.99
RNU4-4P-201ENST00000364588 MEN1O00255 615 aa8.84□□□□□ -0.99
RNU4-4P-201ENST00000364588 NFX1Q12986 1120 aaKnown RBP8.84□□□□□ -0.99
RNU4-4P-201ENST00000364588 ESCO1Q5FWF5 840 aa8.84□□□□□ -0.99
RNU4-4P-201ENST00000364588 FOXD4L5Q5VV16 416 aaPredicted RBP8.84□□□□□ -0.99
RNU4-4P-201ENST00000364588 TREML4Q6UXN2 200 aa8.84□□□□□ -0.99
RNU4-4P-201ENST00000364588 FNBP4Q8N3X1 1017 aaPredicted RBP8.84□□□□□ -0.99
RNU4-4P-201ENST00000364588 NLRP3Q96P20 1036 aa8.84□□□□□ -0.99
RNU4-4P-201ENST00000364588 UACAQ9BZF9 1416 aa8.84□□□□□ -0.99
RNU4-4P-201ENST00000364588 UHRF1BP1LA0JNW5 1464 aa8.83□□□□□ -1
RNU4-4P-201ENST00000364588 PLB1Q6P1J6 1458 aa8.83□□□□□ -1
RNU4-4P-201ENST00000364588 A0A1W2PRU2 124 aa8.83□□□□□ -1
RNU4-4P-201ENST00000364588 H3BM21 787 aa8.83□□□□□ -1
RNU4-4P-201ENST00000364588 LZTS3O60299 673 aaPredicted RBP8.83□□□□□ -1
RNU4-4P-201ENST00000364588 RNF144AP50876 292 aaPredicted RBP8.83□□□□□ -1
RNU4-4P-201ENST00000364588 UGGT2Q9NYU1 1516 aa8.83□□□□□ -1
RNU4-4P-201ENST00000364588 KIAA0556O60303 1618 aa8.83□□□□□ -1
RNU4-4P-201ENST00000364588 GLI2P10070 1586 aa8.82□□□□□ -1
RNU4-4P-201ENST00000364588 FIGNL2A6NMB9 653 aa8.82□□□□□ -1
RNU4-4P-201ENST00000364588 SKIP12755 728 aa8.82□□□□□ -1
RNU4-4P-201ENST00000364588 EML3Q32P44 896 aa8.82□□□□□ -1
RNU4-4P-201ENST00000364588 LYSMD3Q7Z3D4 306 aa8.82□□□□□ -1
RNU4-4P-201ENST00000364588 ZCCHC11Q5TAX3 1644 aaKnown RBP8.82□□□□□ -1
RNU4-4P-201ENST00000364588 CTTNBP2Q8WZ74 1663 aa8.81□□□□□ -1
RNU4-4P-201ENST00000364588 PIK3CDO00329 1044 aa8.81□□□□□ -1
RNU4-4P-201ENST00000364588 PTSQ03393 145 aa8.81□□□□□ -1
RNU4-4P-201ENST00000364588 ADAMTS19Q8TE59 1207 aa8.81□□□□□ -1
RNU4-4P-201ENST00000364588 IRF7Q92985 503 aa8.81□□□□□ -1
RNU4-4P-201ENST00000364588 GLMNQ92990 594 aa8.81□□□□□ -1
RNU4-4P-201ENST00000364588 KDM5BQ9UGL1 1544 aa8.8□□□□□ -1
RNU4-4P-201ENST00000364588 USP17L5A8MUK1 530 aa8.8□□□□□ -1
RNU4-4P-201ENST00000364588 SLC27A3Q5K4L6 730 aa8.8□□□□□ -1
RNU4-4P-201ENST00000364588 HDGFL1Q5TGJ6 251 aa8.8□□□□□ -1
RNU4-4P-201ENST00000364588 ESYT1Q9BSJ8 1104 aa8.8□□□□□ -1
RNU4-4P-201ENST00000364588 RAB6BQ9NRW1 208 aa8.8□□□□□ -1
RNU4-4P-201ENST00000364588 MAP3K4Q9Y6R4 1608 aa8.8□□□□□ -1
RNU4-4P-201ENST00000364588 EPRSP07814 1512 aaKnown RBP8.8□□□□□ -1
RNU4-4P-201ENST00000364588 TSGA10IPQ3SY00 556 aa8.79□□□□□ -1
RNU4-4P-201ENST00000364588 NOD1Q9Y239 953 aa8.79□□□□□ -1
RNU4-4P-201ENST00000364588 COL17A1Q9UMD9 1497 aaPredicted RBP8.78□□□□□ -1
RNU4-4P-201ENST00000364588 PPFIA3O75145 1194 aa8.78□□□□□ -1
RNU4-4P-201ENST00000364588 GTF2E1P29083 439 aaPredicted RBP8.78□□□□□ -1
RNU4-4P-201ENST00000364588 PLEKHM2Q8IWE5 1019 aa8.78□□□□□ -1
RNU4-4P-201ENST00000364588 CNKSR1Q969H4 720 aa8.78□□□□□ -1
RNU4-4P-201ENST00000364588 ATP9BO43861 1147 aa8.77□□□□□ -1.01
RNU4-4P-201ENST00000364588 IL2RAP01589 272 aa8.77□□□□□ -1.01
RNU4-4P-201ENST00000364588 VSIG8P0DPA2 414 aa8.77□□□□□ -1.01
RNU4-4P-201ENST00000364588 VEGFBP49765 207 aa8.77□□□□□ -1.01
RNU4-4P-201ENST00000364588 NCOA4Q13772 614 aa8.77□□□□□ -1.01
RNU4-4P-201ENST00000364588 LCE2AQ5TA79 106 aaPredicted RBP8.77□□□□□ -1.01
RNU4-4P-201ENST00000364588 UCN2Q96RP3 112 aa8.77□□□□□ -1.01
RNU4-4P-201ENST00000364588 USP17L3A6NCW0 530 aa8.76□□□□□ -1.01
RNU4-4P-201ENST00000364588 USP17L4A6NCW7 530 aa8.76□□□□□ -1.01
RNU4-4P-201ENST00000364588 WASLO00401 505 aaPredicted RBP8.76□□□□□ -1.01
RNU4-4P-201ENST00000364588 USP17L2Q6R6M4 530 aa8.76□□□□□ -1.01
RNU4-4P-201ENST00000364588 USP17L1Q7RTZ2 530 aa8.76□□□□□ -1.01
RNU4-4P-201ENST00000364588 PRICKLE2Q7Z3G6 844 aa8.76□□□□□ -1.01
RNU4-4P-201ENST00000364588 TRIM50Q86XT4 487 aa8.76□□□□□ -1.01
RNU4-4P-201ENST00000364588 CCDC155Q8N6L0 562 aa8.76□□□□□ -1.01
RNU4-4P-201ENST00000364588 CALR3Q96L12 384 aaKnown RBP8.76□□□□□ -1.01
RNU4-4P-201ENST00000364588 ETNK1Q9HBU6 452 aa8.76□□□□□ -1.01
RNU4-4P-201ENST00000364588 ADGRL1O94910 1474 aa8.76□□□□□ -1.01
RNU4-4P-201ENST00000364588 TEX14Q8IWB6 1497 aa8.76□□□□□ -1.01
RNU4-4P-201ENST00000364588 WDR7Q9Y4E6 1490 aa8.76□□□□□ -1.01
RNU4-4P-201ENST00000364588 SLC35F4A4IF30 521 aa8.75□□□□□ -1.01
RNU4-4P-201ENST00000364588 SPATA31C2B4DYI2 1134 aa8.75□□□□□ -1.01
RNU4-4P-201ENST00000364588 WDR44Q5JSH3 913 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms