RNA–Protein interactions for RNA: ENST00000364019.1

RNU4-13P-201, Transcript of RNA, U4 small nuclear 13, pseudogene, humanhuman

BASIC

Gene RNU4-13P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-13P-201ENST00000364019 VEGFBP49765 207 aa3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 SMTNP53814 917 aa3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 INSM1Q01101 510 aaPredicted RBP3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 KRT76Q01546 638 aa3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 UBAP2LQ14157 1087 aaKnown RBP3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 LBRQ14739 615 aaKnown RBP3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 USP17L2Q6R6M4 530 aa3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 TAS1R3Q7RTX0 852 aa3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 USP17L1Q7RTZ2 530 aa3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 PRICKLE2Q7Z3G6 844 aa3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 TRIM50Q86XT4 487 aa3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 TRIM22Q8IYM9 498 aa3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 SIX5Q8N196 739 aa3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 ZSCAN10Q96SZ4 725 aaPredicted RBP3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 RAB6BQ9NRW1 208 aa3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 CUEDC1Q9NWM3 386 aaPredicted RBP3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 MAFBQ9Y5Q3 323 aaPredicted RBP3.9□□□□□ -1.79
RNU4-13P-201ENST00000364019 A0A1B0GTH6 734 aa3.89□□□□□ -1.79
RNU4-13P-201ENST00000364019 CDK2AP1O14519 115 aa3.89□□□□□ -1.79
RNU4-13P-201ENST00000364019 STAU1O95793 577 aaKnown RBP3.89□□□□□ -1.79
RNU4-13P-201ENST00000364019 SLURP2P0DP57 97 aa3.89□□□□□ -1.79
RNU4-13P-201ENST00000364019 GTF2IP78347 998 aa3.89□□□□□ -1.79
RNU4-13P-201ENST00000364019 FOXK2Q01167 660 aa3.89□□□□□ -1.79
RNU4-13P-201ENST00000364019 POU4F2Q12837 409 aa3.89□□□□□ -1.79
RNU4-13P-201ENST00000364019 SUZ12Q15022 739 aaKnown RBP3.89□□□□□ -1.79
RNU4-13P-201ENST00000364019 C4orf17Q53FE4 359 aa3.89□□□□□ -1.79
RNU4-13P-201ENST00000364019 SLC27A3Q5K4L6 730 aa3.89□□□□□ -1.79
RNU4-13P-201ENST00000364019 LARGE2Q8N3Y3 721 aa3.89□□□□□ -1.79
RNU4-13P-201ENST00000364019 RHBDD1Q8TEB9 315 aa3.89□□□□□ -1.79
RNU4-13P-201ENST00000364019 ZNF837Q96EG3 531 aaPredicted RBP3.89□□□□□ -1.79
RNU4-13P-201ENST00000364019 ESF1Q9H501 851 aaKnown RBP3.89□□□□□ -1.79
RNU4-13P-201ENST00000364019 A6NJY4 79 aa3.88□□□□□ -1.79
RNU4-13P-201ENST00000364019 F11P03951 625 aa3.88□□□□□ -1.79
RNU4-13P-201ENST00000364019 RHOQP17081 205 aa3.88□□□□□ -1.79
RNU4-13P-201ENST00000364019 ATP1A2P50993 1020 aa3.88□□□□□ -1.79
RNU4-13P-201ENST00000364019 CLDN10P78369 228 aa3.88□□□□□ -1.79
RNU4-13P-201ENST00000364019 GAS6Q14393 721 aa3.88□□□□□ -1.79
RNU4-13P-201ENST00000364019 TLR1Q15399 786 aa3.88□□□□□ -1.79
RNU4-13P-201ENST00000364019 KANK4Q5T7N3 995 aaPredicted RBP3.88□□□□□ -1.79
RNU4-13P-201ENST00000364019 SV2AQ7L0J3 742 aa3.88□□□□□ -1.79
RNU4-13P-201ENST00000364019 C1orf216Q8TAB5 229 aa3.88□□□□□ -1.79
RNU4-13P-201ENST00000364019 PPP1R12CQ9BZL4 782 aa3.88□□□□□ -1.79
RNU4-13P-201ENST00000364019 CRISPLD1Q9H336 500 aa3.88□□□□□ -1.79
RNU4-13P-201ENST00000364019 SCHIP1Q9P0W5 487 aaPredicted RBP3.88□□□□□ -1.79
RNU4-13P-201ENST00000364019 STK17AQ9UEE5 414 aa3.88□□□□□ -1.79
RNU4-13P-201ENST00000364019 KIAA1024Q9UPX6 916 aa3.88□□□□□ -1.79
RNU4-13P-201ENST00000364019 PALM3A6NDB9 673 aaPredicted RBP3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 H7C1W4 665 aa3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 BACH1O14867 736 aa3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 ATP4AP20648 1035 aa3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 HIRAP54198 1017 aaPredicted RBP3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 DBN1Q16643 649 aa3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 GNASQ5JWF2 1037 aa3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 RNFT1Q5M7Z0 435 aa3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 CFAP70Q5T0N1 1121 aa3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 VWA5B2Q8N398 1253 aa3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 C7orf43Q8WVR3 580 aa3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 TIMMDC1Q9NPL8 285 aa3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 NDFIP2Q9NV92 336 aa3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 ZNF358Q9NW07 568 aa3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 ZDHHC3Q9NYG2 299 aa3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 TFIP11Q9UBB9 837 aaKnown RBP3.87□□□□□ -1.79
RNU4-13P-201ENST00000364019 FAM196BA6NMK8 535 aa3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 SRPK2P78362 688 aaKnown RBP3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 TEAD4Q15561 434 aa3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 DEPDC4Q8N2C3 294 aa3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 STAG2Q8N3U4 1231 aa3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 OGFOD1Q8N543 542 aa3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 CALR3Q96L12 384 aaKnown RBP3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 CFHR5Q9BXR6 569 aa3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 COL25A1Q9BXS0 654 aaPredicted RBP3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 NIFKQ9BYG3 293 aaKnown RBP3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 ZMYND15Q9H091 742 aa3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 DNAAF2Q9NVR5 837 aaKnown RBP3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 MKRN1Q9UHC7 482 aaKnown RBP3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 GTF3C3Q9Y5Q9 886 aa3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 GPC6Q9Y625 555 aaPredicted RBP3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 USP3Q9Y6I4 520 aa3.86□□□□□ -1.79
RNU4-13P-201ENST00000364019 MSX1P28360 303 aa3.85□□□□□ -1.79
RNU4-13P-201ENST00000364019 SRSF11Q05519 484 aaKnown RBP3.85□□□□□ -1.79
RNU4-13P-201ENST00000364019 PTK7Q13308 1070 aa3.85□□□□□ -1.79
RNU4-13P-201ENST00000364019 CCDC102BQ68D86 513 aa3.85□□□□□ -1.79
RNU4-13P-201ENST00000364019 TMEM214Q6NUQ4 689 aaKnown RBP3.85□□□□□ -1.79
RNU4-13P-201ENST00000364019 NLRP8Q86W28 1048 aa3.85□□□□□ -1.79
RNU4-13P-201ENST00000364019 ZSCAN1Q8NBB4 408 aa3.85□□□□□ -1.79
RNU4-13P-201ENST00000364019 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.85□□□□□ -1.79
RNU4-13P-201ENST00000364019 ZDHHC1Q8WTX9 485 aa3.85□□□□□ -1.79
RNU4-13P-201ENST00000364019 ARXQ96QS3 562 aa3.85□□□□□ -1.79
RNU4-13P-201ENST00000364019 LRRC4BQ9NT99 713 aa3.85□□□□□ -1.79
RNU4-13P-201ENST00000364019 EML1O00423 815 aa3.84□□□□□ -1.79
RNU4-13P-201ENST00000364019 ARHGEF15O94989 841 aa3.84□□□□□ -1.79
RNU4-13P-201ENST00000364019 GTF2E1P29083 439 aaPredicted RBP3.84□□□□□ -1.79
RNU4-13P-201ENST00000364019 SAMD5Q5TGI4 173 aa3.84□□□□□ -1.79
RNU4-13P-201ENST00000364019 TPCN2Q8NHX9 752 aa3.84□□□□□ -1.79
RNU4-13P-201ENST00000364019 GAS2L2Q8NHY3 880 aa3.84□□□□□ -1.79
RNU4-13P-201ENST00000364019 NUCKS1Q9H1E3 243 aaKnown RBP3.84□□□□□ -1.79
RNU4-13P-201ENST00000364019 MBIPQ9NS73 344 aa3.84□□□□□ -1.79
RNU4-13P-201ENST00000364019 CDC14CA4D256 554 aa3.83□□□□□ -1.8
RNU4-13P-201ENST00000364019 C21orf2O43822 256 aa3.83□□□□□ -1.8
RNU4-13P-201ENST00000364019 ELOAQ14241 798 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms