RNA–Protein interactions for RNA: ENST00000362058.2

CROCCP2-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 2

Gene CROCCP2, Length 2,029 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-201ENST00000362058 GBP4Q96PP9 640 aa29.92■■■□□ 2.38
CROCCP2-201ENST00000362058 RBM42Q9BTD8 480 aaKnown RBP29.92■■■□□ 2.38
CROCCP2-201ENST00000362058 ADGRL3Q9HAR2 1447 aa29.92■■■□□ 2.38
CROCCP2-201ENST00000362058 KCNH5Q8NCM2 988 aa29.91■■■□□ 2.38
CROCCP2-201ENST00000362058 SETD1BQ9UPS6 1966 aaKnown RBP29.91■■■□□ 2.38
CROCCP2-201ENST00000362058 REC8O95072 547 aa29.91■■■□□ 2.38
CROCCP2-201ENST00000362058 PTMSP20962 102 aa29.9■■■□□ 2.38
CROCCP2-201ENST00000362058 CHMP4AQ9BY43 222 aa29.9■■■□□ 2.38
CROCCP2-201ENST00000362058 PDE1AP54750 535 aa29.89■■■□□ 2.38
CROCCP2-201ENST00000362058 ATP8B2P98198 1209 aa29.89■■■□□ 2.38
CROCCP2-201ENST00000362058 TNPO1Q92973 898 aaKnown RBP29.89■■■□□ 2.38
CROCCP2-201ENST00000362058 CEMIPQ8WUJ3 1361 aa29.89■■■□□ 2.38
CROCCP2-201ENST00000362058 MED1Q15648 1581 aaPredicted RBP29.88■■■□□ 2.37
CROCCP2-201ENST00000362058 PSME1Q06323 249 aa29.88■■■□□ 2.37
CROCCP2-201ENST00000362058 USHBP1Q8N6Y0 703 aa29.88■■■□□ 2.37
CROCCP2-201ENST00000362058 NECTIN2Q92692 538 aa29.88■■■□□ 2.37
CROCCP2-201ENST00000362058 TUBGCP6Q96RT7 1819 aa29.88■■■□□ 2.37
CROCCP2-201ENST00000362058 KDM3BQ7LBC6 1761 aa29.88■■■□□ 2.37
CROCCP2-201ENST00000362058 LRRCC1Q9C099 1032 aa29.88■■■□□ 2.37
CROCCP2-201ENST00000362058 HDGFL1Q5TGJ6 251 aa29.87■■■□□ 2.37
CROCCP2-201ENST00000362058 LMO7Q8WWI1 1683 aa29.86■■■□□ 2.37
CROCCP2-201ENST00000362058 ERC2O15083 957 aa29.86■■■□□ 2.37
CROCCP2-201ENST00000362058 TRHP20396 242 aaPredicted RBP29.86■■■□□ 2.37
CROCCP2-201ENST00000362058 ESCO1Q5FWF5 840 aa29.86■■■□□ 2.37
CROCCP2-201ENST00000362058 EXOC6BQ9Y2D4 811 aa29.85■■■□□ 2.37
CROCCP2-201ENST00000362058 GOLGA6L3A6NEY3 463 aa29.84■■■□□ 2.37
CROCCP2-201ENST00000362058 HOXB7P09629 217 aa29.84■■■□□ 2.37
CROCCP2-201ENST00000362058 RGPD2P0DJD1 1756 aa29.84■■■□□ 2.37
CROCCP2-201ENST00000362058 NBPF6Q5VWK0 638 aa29.84■■■□□ 2.37
CROCCP2-201ENST00000362058 NBPF4Q96M43 638 aa29.84■■■□□ 2.37
CROCCP2-201ENST00000362058 IBTKQ9P2D0 1353 aaPredicted RBP29.83■■■□□ 2.37
CROCCP2-201ENST00000362058 SALL3Q9BXA9 1300 aa29.83■■■□□ 2.37
CROCCP2-201ENST00000362058 PNMA6EA0A0J9YXQ4 647 aa29.81■■■□□ 2.36
CROCCP2-201ENST00000362058 UBTFL1P0CB47 393 aaPredicted RBP29.81■■■□□ 2.36
CROCCP2-201ENST00000362058 FOXD4L1Q9NU39 408 aa29.81■■■□□ 2.36
CROCCP2-201ENST00000362058 LRRFIP2Q9Y608 721 aaKnown RBP29.81■■■□□ 2.36
CROCCP2-201ENST00000362058 FSD2A1L4K1 749 aa29.81■■■□□ 2.36
CROCCP2-201ENST00000362058 ST18O60284 1047 aa29.81■■■□□ 2.36
CROCCP2-201ENST00000362058 SKOR2Q2VWA4 1001 aaPredicted RBP29.81■■■□□ 2.36
CROCCP2-201ENST00000362058 SRCIN1Q9C0H9 1055 aa29.81■■■□□ 2.36
CROCCP2-201ENST00000362058 MX1P20591 662 aa29.8■■■□□ 2.36
CROCCP2-201ENST00000362058 USP44Q9H0E7 712 aa29.8■■■□□ 2.36
CROCCP2-201ENST00000362058 GZF1Q9H116 711 aaPredicted RBP29.79■■■□□ 2.36
CROCCP2-201ENST00000362058 EIF4A1P60842 406 aaKnown RBP29.79■■■□□ 2.36
CROCCP2-201ENST00000362058 PLEKHO1Q53GL0 409 aaPredicted RBP29.78■■■□□ 2.36
CROCCP2-201ENST00000362058 AKAP4Q5JQC9 854 aa29.78■■■□□ 2.36
CROCCP2-201ENST00000362058 RTN4Q9NQC3 1192 aaKnown RBP29.78■■■□□ 2.36
CROCCP2-201ENST00000362058 RBM33Q96EV2 1170 aaKnown RBP29.77■■■□□ 2.36
CROCCP2-201ENST00000362058 ADAMTSL3P82987 1691 aa29.76■■■□□ 2.36
CROCCP2-201ENST00000362058 AMOTQ4VCS5 1084 aa29.76■■■□□ 2.36
CROCCP2-201ENST00000362058 CLEC17AQ6ZS10 378 aa29.76■■■□□ 2.36
CROCCP2-201ENST00000362058 PHAXQ9H814 394 aaKnown RBP29.76■■■□□ 2.36
CROCCP2-201ENST00000362058 STAP2Q9UGK3 403 aa29.76■■■□□ 2.36
CROCCP2-201ENST00000362058 ISY1Q9ULR0 285 aaKnown RBP29.76■■■□□ 2.36
CROCCP2-201ENST00000362058 AOX1Q06278 1338 aa29.76■■■□□ 2.35
CROCCP2-201ENST00000362058 SLIT3O75094 1523 aa29.76■■■□□ 2.35
CROCCP2-201ENST00000362058 NCAPD2Q15021 1401 aa29.76■■■□□ 2.35
CROCCP2-201ENST00000362058 NPHP4O75161 1426 aaPredicted RBP29.75■■■□□ 2.35
CROCCP2-201ENST00000362058 ZBTB7CA1YPR0 619 aa29.75■■■□□ 2.35
CROCCP2-201ENST00000362058 TEFQ10587 303 aa29.75■■■□□ 2.35
CROCCP2-201ENST00000362058 LGR6Q9HBX8 967 aa29.75■■■□□ 2.35
CROCCP2-201ENST00000362058 GOLGA6L22H0YM25 854 aa29.74■■■□□ 2.35
CROCCP2-201ENST00000362058 ZNF530Q6P9A1 599 aaPredicted RBP29.74■■■□□ 2.35
CROCCP2-201ENST00000362058 SSH3Q8TE77 659 aa29.74■■■□□ 2.35
CROCCP2-201ENST00000362058 OVOS2A0A0G2JMS6 1433 aa29.73■■■□□ 2.35
CROCCP2-201ENST00000362058 RAB11FIP3O75154 756 aa29.73■■■□□ 2.35
CROCCP2-201ENST00000362058 EIF2S2P20042 333 aaKnown RBP29.73■■■□□ 2.35
CROCCP2-201ENST00000362058 NUCB2P80303 420 aa29.73■■■□□ 2.35
CROCCP2-201ENST00000362058 CWC22Q9HCG8 908 aaKnown RBP29.73■■■□□ 2.35
CROCCP2-201ENST00000362058 AK9Q5TCS8 1911 aa29.72■■■□□ 2.35
CROCCP2-201ENST00000362058 ESYT1Q9BSJ8 1104 aa29.71■■■□□ 2.35
CROCCP2-201ENST00000362058 BTBD11A6QL63 1104 aa29.71■■■□□ 2.35
CROCCP2-201ENST00000362058 GCP02774 474 aa29.71■■■□□ 2.35
CROCCP2-201ENST00000362058 SSFA2P28290 1259 aa29.71■■■□□ 2.35
CROCCP2-201ENST00000362058 MCCP23508 829 aa29.7■■■□□ 2.34
CROCCP2-201ENST00000362058 ARHGEF25Q86VW2 580 aa29.7■■■□□ 2.34
CROCCP2-201ENST00000362058 XRCC6P12956 609 aaKnown RBP eCLIP29.69■■■□□ 2.34
CROCCP2-201ENST00000362058 MRE11P49959 708 aa29.69■■■□□ 2.34
CROCCP2-201ENST00000362058 C1orf141Q5JVX7 400 aa29.69■■■□□ 2.34
CROCCP2-201ENST00000362058 DNAAF4Q8WXU2 420 aa29.69■■■□□ 2.34
CROCCP2-201ENST00000362058 LRRC59Q96AG4 307 aaKnown RBP29.69■■■□□ 2.34
CROCCP2-201ENST00000362058 CHPF2Q9P2E5 772 aa29.69■■■□□ 2.34
CROCCP2-201ENST00000362058 CAMTA1Q9Y6Y1 1673 aa29.69■■■□□ 2.34
CROCCP2-201ENST00000362058 POLA2Q14181 598 aa29.69■■■□□ 2.34
CROCCP2-201ENST00000362058 TRIM6-TRIM34B2RNG4 842 aa29.68■■■□□ 2.34
CROCCP2-201ENST00000362058 TRPM3Q9HCF6 1732 aaPredicted RBP29.68■■■□□ 2.34
CROCCP2-201ENST00000362058 TSHZ3Q63HK5 1081 aa29.67■■■□□ 2.34
CROCCP2-201ENST00000362058 FAM43AQ8N2R8 423 aa29.67■■■□□ 2.34
CROCCP2-201ENST00000362058 PPP1R42Q7Z4L9 355 aa29.67■■■□□ 2.34
CROCCP2-201ENST00000362058 KIF1AQ12756 1690 aa29.67■■■□□ 2.34
CROCCP2-201ENST00000362058 RNMTO43148 476 aaKnown RBP29.66■■■□□ 2.34
CROCCP2-201ENST00000362058 CHMLP26374 656 aa29.66■■■□□ 2.34
CROCCP2-201ENST00000362058 RILPL2Q969X0 211 aa29.66■■■□□ 2.34
CROCCP2-201ENST00000362058 BEND3Q5T5X7 828 aa29.66■■■□□ 2.34
CROCCP2-201ENST00000362058 ORAI2Q96SN7 254 aa29.66■■■□□ 2.34
CROCCP2-201ENST00000362058 MPRIPQ6WCQ1 1025 aa29.65■■■□□ 2.34
CROCCP2-201ENST00000362058 SURF6O75683 361 aaKnown RBP29.64■■■□□ 2.34
CROCCP2-201ENST00000362058 MCM2P49736 904 aa29.64■■■□□ 2.34
CROCCP2-201ENST00000362058 ANAPC15P60006 121 aa29.64■■■□□ 2.34
CROCCP2-201ENST00000362058 PI4KAP2A4QPH2 592 aa29.64■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms