RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 KDM3BQ7LBC6 1761 aa23.24■■□□□ 1.31
CCDC7-203ENST00000362006 TWISTNBQ3B726 338 aaPredicted RBP23.24■■□□□ 1.31
CCDC7-203ENST00000362006 VAMP4O75379 141 aa23.23■■□□□ 1.31
CCDC7-203ENST00000362006 RRP1P56182 461 aaKnown RBP23.23■■□□□ 1.31
CCDC7-203ENST00000362006 ALDH1L2Q3SY69 923 aa23.23■■□□□ 1.31
CCDC7-203ENST00000362006 ATRNO75882 1429 aa23.23■■□□□ 1.31
CCDC7-203ENST00000362006 CABP4P57796 275 aa23.23■■□□□ 1.31
CCDC7-203ENST00000362006 C8orf58Q8NAV2 365 aa23.23■■□□□ 1.31
CCDC7-203ENST00000362006 GJD4Q96KN9 370 aaPredicted RBP23.22■■□□□ 1.31
CCDC7-203ENST00000362006 FAM98CQ17RN3 349 aaKnown RBP23.2■■□□□ 1.3
CCDC7-203ENST00000362006 TSPYL6Q8N831 410 aa23.2■■□□□ 1.3
CCDC7-203ENST00000362006 NFATC2IPQ8NCF5 419 aa23.2■■□□□ 1.3
CCDC7-203ENST00000362006 CHMP4AQ9BY43 222 aa23.2■■□□□ 1.3
CCDC7-203ENST00000362006 GTF3C3Q9Y5Q9 886 aa23.2■■□□□ 1.3
CCDC7-203ENST00000362006 ELL2O00472 640 aaPredicted RBP23.18■■□□□ 1.3
CCDC7-203ENST00000362006 BCAR3O75815 825 aa23.18■■□□□ 1.3
CCDC7-203ENST00000362006 EIF4A1P60842 406 aaKnown RBP23.18■■□□□ 1.3
CCDC7-203ENST00000362006 QTRT2Q9H974 415 aaKnown RBP23.17■■□□□ 1.3
CCDC7-203ENST00000362006 HOXB7P09629 217 aa23.17■■□□□ 1.3
CCDC7-203ENST00000362006 BRPF1P55201 1214 aaPredicted RBP23.17■■□□□ 1.3
CCDC7-203ENST00000362006 ZNF772Q68DY9 489 aaPredicted RBP23.17■■□□□ 1.3
CCDC7-203ENST00000362006 SMC4Q9NTJ3 1288 aa23.17■■□□□ 1.3
CCDC7-203ENST00000362006 GLI3P10071 1580 aa23.16■■□□□ 1.3
CCDC7-203ENST00000362006 SSH1Q8WYL5 1049 aa23.16■■□□□ 1.3
CCDC7-203ENST00000362006 THSD7AQ9UPZ6 1657 aa23.16■■□□□ 1.3
CCDC7-203ENST00000362006 ONECUT3O60422 494 aaPredicted RBP23.15■■□□□ 1.3
CCDC7-203ENST00000362006 ERICH6BQ5W0A0 696 aa23.15■■□□□ 1.3
CCDC7-203ENST00000362006 ZNF790Q6PG37 636 aa23.15■■□□□ 1.3
CCDC7-203ENST00000362006 KRT24Q2M2I5 525 aa23.14■■□□□ 1.3
CCDC7-203ENST00000362006 FKBP8Q14318 412 aa23.14■■□□□ 1.29
CCDC7-203ENST00000362006 TTC5Q8N0Z6 440 aa23.14■■□□□ 1.29
CCDC7-203ENST00000362006 TMOD3Q9NYL9 352 aa23.14■■□□□ 1.29
CCDC7-203ENST00000362006 TOGARAM1Q9Y4F4 1720 aa23.13■■□□□ 1.29
CCDC7-203ENST00000362006 KIF16BQ96L93 1317 aa23.13■■□□□ 1.29
CCDC7-203ENST00000362006 MARCH10Q8NA82 808 aaPredicted RBP23.12■■□□□ 1.29
CCDC7-203ENST00000362006 HEG1Q9ULI3 1381 aa23.12■■□□□ 1.29
CCDC7-203ENST00000362006 A0A0G2JS52 829 aa23.12■■□□□ 1.29
CCDC7-203ENST00000362006 KCNQ3O43525 872 aa23.12■■□□□ 1.29
CCDC7-203ENST00000362006 CANXP27824 592 aaKnown RBP23.12■■□□□ 1.29
CCDC7-203ENST00000362006 MYT1Q01538 1121 aa23.12■■□□□ 1.29
CCDC7-203ENST00000362006 IPO8O15397 1037 aaKnown RBP23.11■■□□□ 1.29
CCDC7-203ENST00000362006 BCL2L13Q9BXK5 485 aa23.11■■□□□ 1.29
CCDC7-203ENST00000362006 MS4A1P11836 297 aa23.11■■□□□ 1.29
CCDC7-203ENST00000362006 CCDC30Q5VVM6 783 aa23.11■■□□□ 1.29
CCDC7-203ENST00000362006 ITGB4P16144 1822 aa23.11■■□□□ 1.29
CCDC7-203ENST00000362006 PLIN1O60240 522 aa23.1■■□□□ 1.29
CCDC7-203ENST00000362006 MRPL50Q8N5N7 158 aaKnown RBP23.1■■□□□ 1.29
CCDC7-203ENST00000362006 CACNA1FO60840 1977 aa23.1■■□□□ 1.29
CCDC7-203ENST00000362006 PDE3AQ14432 1141 aa23.09■■□□□ 1.29
CCDC7-203ENST00000362006 SLC39A6Q13433 755 aa23.09■■□□□ 1.29
CCDC7-203ENST00000362006 ZKSCAN2Q63HK3 967 aa23.09■■□□□ 1.29
CCDC7-203ENST00000362006 FRAT1Q92837 279 aaPredicted RBP23.09■■□□□ 1.29
CCDC7-203ENST00000362006 FMNL2Q96PY5 1086 aa23.09■■□□□ 1.29
CCDC7-203ENST00000362006 GIGYF1O75420 1035 aaPredicted RBP23.08■■□□□ 1.29
CCDC7-203ENST00000362006 STK31Q9BXU1 1019 aa23.08■■□□□ 1.29
CCDC7-203ENST00000362006 PAPPAQ13219 1627 aa23.08■■□□□ 1.28
CCDC7-203ENST00000362006 ARHGAP45Q92619 1136 aa23.08■■□□□ 1.28
CCDC7-203ENST00000362006 IRX6P78412 446 aaPredicted RBP23.07■■□□□ 1.28
CCDC7-203ENST00000362006 BCL9O00512 1426 aa23.07■■□□□ 1.28
CCDC7-203ENST00000362006 DOT1LQ8TEK3 1739 aa23.07■■□□□ 1.28
CCDC7-203ENST00000362006 KAT6BQ8WYB5 2073 aa23.06■■□□□ 1.28
CCDC7-203ENST00000362006 PIGBQ92521 554 aa23.06■■□□□ 1.28
CCDC7-203ENST00000362006 HDGFL1Q5TGJ6 251 aa23.06■■□□□ 1.28
CCDC7-203ENST00000362006 UBR2Q8IWV8 1755 aa23.05■■□□□ 1.28
CCDC7-203ENST00000362006 SNRPA1P09661 255 aaKnown RBP23.05■■□□□ 1.28
CCDC7-203ENST00000362006 RBM6P78332 1123 aaKnown RBP23.05■■□□□ 1.28
CCDC7-203ENST00000362006 SEPT12Q8IYM1 358 aa23.05■■□□□ 1.28
CCDC7-203ENST00000362006 ZNF496Q96IT1 587 aaPredicted RBP23.05■■□□□ 1.28
CCDC7-203ENST00000362006 NOB1Q9ULX3 412 aaKnown RBP23.05■■□□□ 1.28
CCDC7-203ENST00000362006 PRIM1P49642 420 aaKnown RBP23.04■■□□□ 1.28
CCDC7-203ENST00000362006 ATF7IPQ6VMQ6 1270 aa23.04■■□□□ 1.28
CCDC7-203ENST00000362006 SLC4A2P04920 1241 aa23.03■■□□□ 1.28
CCDC7-203ENST00000362006 SYTL4Q96C24 671 aaPredicted RBP23.02■■□□□ 1.28
CCDC7-203ENST00000362006 TCERG1O14776 1098 aaKnown RBP23.02■■□□□ 1.28
CCDC7-203ENST00000362006 PTPRCP08575 1304 aa23.01■■□□□ 1.27
CCDC7-203ENST00000362006 EIF2S2P20042 333 aaKnown RBP23.01■■□□□ 1.27
CCDC7-203ENST00000362006 API5Q9BZZ5 524 aaKnown RBP23.01■■□□□ 1.27
CCDC7-203ENST00000362006 KCPQ6ZWJ8 1503 aa23.01■■□□□ 1.27
CCDC7-203ENST00000362006 DZIP1LQ8IYY4 767 aaKnown RBP23■■□□□ 1.27
CCDC7-203ENST00000362006 ATG3Q9NT62 314 aa23■■□□□ 1.27
CCDC7-203ENST00000362006 VSIG10Q8N0Z9 540 aa23■■□□□ 1.27
CCDC7-203ENST00000362006 DBF4Q9UBU7 674 aaPredicted RBP23■■□□□ 1.27
CCDC7-203ENST00000362006 TRIM27P14373 513 aa22.99■■□□□ 1.27
CCDC7-203ENST00000362006 C20orf194Q5TEA3 1177 aa22.99■■□□□ 1.27
CCDC7-203ENST00000362006 FTSJ3Q8IY81 847 aaKnown RBP22.99■■□□□ 1.27
CCDC7-203ENST00000362006 TEX13AQ9BXU3 409 aaPredicted RBP22.99■■□□□ 1.27
CCDC7-203ENST00000362006 ASAP1Q9ULH1 1129 aa22.99■■□□□ 1.27
CCDC7-203ENST00000362006 ACSBG1Q96GR2 724 aa22.98■■□□□ 1.27
CCDC7-203ENST00000362006 NECTIN2Q92692 538 aa22.97■■□□□ 1.27
CCDC7-203ENST00000362006 C5P01031 1676 aa22.97■■□□□ 1.27
CCDC7-203ENST00000362006 LAMB4A4D0S4 1761 aa22.97■■□□□ 1.27
CCDC7-203ENST00000362006 CRBNQ96SW2 442 aa22.97■■□□□ 1.27
CCDC7-203ENST00000362006 RXRBP28702 533 aa22.96■■□□□ 1.27
CCDC7-203ENST00000362006 SMARCC1Q92922 1105 aaPredicted RBP22.96■■□□□ 1.27
CCDC7-203ENST00000362006 PTCD1O75127 700 aaKnown RBP22.96■■□□□ 1.27
CCDC7-203ENST00000362006 ERBB4Q15303 1308 aa22.96■■□□□ 1.27
CCDC7-203ENST00000362006 PRAMEF22A3QJZ6 481 aa22.95■■□□□ 1.26
CCDC7-203ENST00000362006 PANK1Q8TE04 598 aa22.95■■□□□ 1.26
CCDC7-203ENST00000362006 DDX21Q9NR30 783 aaKnown RBP eCLIP22.95■■□□□ 1.26
CCDC7-203ENST00000362006 HYPKQ9NX55 129 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms