RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 RRP7AQ9Y3A4 280 aaKnown RBP18.14■□□□□ 0.49
NSMCE1-201ENST00000361439 DLG5Q8TDM6 1919 aa18.12■□□□□ 0.49
NSMCE1-201ENST00000361439 KAT6BQ8WYB5 2073 aa18.12■□□□□ 0.49
NSMCE1-201ENST00000361439 SOCS7O14512 581 aa18.12■□□□□ 0.49
NSMCE1-201ENST00000361439 TAF7Q15545 349 aaPredicted RBP18.12■□□□□ 0.49
NSMCE1-201ENST00000361439 TNS1Q9HBL0 1735 aaKnown RBP18.12■□□□□ 0.49
NSMCE1-201ENST00000361439 ITGB4P16144 1822 aa18.12■□□□□ 0.49
NSMCE1-201ENST00000361439 PTF1AQ7RTS3 328 aa18.11■□□□□ 0.49
NSMCE1-201ENST00000361439 RGPD3A6NKT7 1758 aaPredicted RBP18.1■□□□□ 0.49
NSMCE1-201ENST00000361439 RGPD4Q7Z3J3 1758 aa18.1■□□□□ 0.49
NSMCE1-201ENST00000361439 DCTN1Q14203 1278 aa18.1■□□□□ 0.49
NSMCE1-201ENST00000361439 BTAF1O14981 1849 aa18.09■□□□□ 0.49
NSMCE1-201ENST00000361439 BTBD11A6QL63 1104 aa18.09■□□□□ 0.49
NSMCE1-201ENST00000361439 SLC27A3Q5K4L6 730 aa18.09■□□□□ 0.49
NSMCE1-201ENST00000361439 WWC1Q8IX03 1113 aa18.09■□□□□ 0.49
NSMCE1-201ENST00000361439 CAMKK2Q96RR4 588 aa18.09■□□□□ 0.49
NSMCE1-201ENST00000361439 ATG3Q9NT62 314 aa18.09■□□□□ 0.49
NSMCE1-201ENST00000361439 PALLDQ8WX93 1383 aa18.08■□□□□ 0.49
NSMCE1-201ENST00000361439 IL16Q14005 1332 aa18.08■□□□□ 0.49
NSMCE1-201ENST00000361439 WDR63Q8IWG1 891 aa18.08■□□□□ 0.48
NSMCE1-201ENST00000361439 VIRMAQ69YN4 1812 aaKnown RBP18.07■□□□□ 0.48
NSMCE1-201ENST00000361439 ZNF790Q6PG37 636 aa18.07■□□□□ 0.48
NSMCE1-201ENST00000361439 TTC5Q8N0Z6 440 aa18.07■□□□□ 0.48
NSMCE1-201ENST00000361439 ASAP1Q9ULH1 1129 aa18.07■□□□□ 0.48
NSMCE1-201ENST00000361439 SIPA1L3O60292 1781 aaPredicted RBP18.07■□□□□ 0.48
NSMCE1-201ENST00000361439 CFAP44Q96MT7 982 aa18.06■□□□□ 0.48
NSMCE1-201ENST00000361439 THUMPD2Q9BTF0 503 aaKnown RBP18.06■□□□□ 0.48
NSMCE1-201ENST00000361439 IFT57Q9NWB7 429 aa18.06■□□□□ 0.48
NSMCE1-201ENST00000361439 GNAI1P63096 354 aa18.05■□□□□ 0.48
NSMCE1-201ENST00000361439 EN1Q05925 392 aaPredicted RBP18.05■□□□□ 0.48
NSMCE1-201ENST00000361439 VSIG10Q8N0Z9 540 aa18.05■□□□□ 0.48
NSMCE1-201ENST00000361439 LOC102724428A0A0B4J2F2 783 aa18.04■□□□□ 0.48
NSMCE1-201ENST00000361439 CHL1O00533 1208 aa18.04■□□□□ 0.48
NSMCE1-201ENST00000361439 ZNF853P0CG23 659 aa18.04■□□□□ 0.48
NSMCE1-201ENST00000361439 SIK1P57059 783 aa18.04■□□□□ 0.48
NSMCE1-201ENST00000361439 TXNRD1Q16881 649 aa18.04■□□□□ 0.48
NSMCE1-201ENST00000361439 PAPPAQ13219 1627 aa18.04■□□□□ 0.48
NSMCE1-201ENST00000361439 ZNF521Q96K83 1311 aa18.03■□□□□ 0.48
NSMCE1-201ENST00000361439 PROM2Q8N271 834 aa18.03■□□□□ 0.48
NSMCE1-201ENST00000361439 ZNF831Q5JPB2 1677 aa18.03■□□□□ 0.48
NSMCE1-201ENST00000361439 LY75O60449 1722 aa18.02■□□□□ 0.48
NSMCE1-201ENST00000361439 SLC39A6Q13433 755 aa18.02■□□□□ 0.48
NSMCE1-201ENST00000361439 EZH2Q15910 746 aaKnown RBP18.02■□□□□ 0.48
NSMCE1-201ENST00000361439 DEFB132Q7Z7B7 95 aa18.02■□□□□ 0.48
NSMCE1-201ENST00000361439 FMNL2Q96PY5 1086 aa18.02■□□□□ 0.48
NSMCE1-201ENST00000361439 TSPYL4Q9UJ04 414 aa18.02■□□□□ 0.48
NSMCE1-201ENST00000361439 CCNL1Q9UK58 526 aaPredicted RBP18.02■□□□□ 0.48
NSMCE1-201ENST00000361439 TEX13AQ9BXU3 409 aaPredicted RBP18.01■□□□□ 0.47
NSMCE1-201ENST00000361439 KCPQ6ZWJ8 1503 aa18■□□□□ 0.47
NSMCE1-201ENST00000361439 PTCD1O75127 700 aaKnown RBP18■□□□□ 0.47
NSMCE1-201ENST00000361439 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
NSMCE1-201ENST00000361439 ATP6V1AP38606 617 aa17.99■□□□□ 0.47
NSMCE1-201ENST00000361439 ZNF496Q96IT1 587 aaPredicted RBP17.99■□□□□ 0.47
NSMCE1-201ENST00000361439 SALL2Q9Y467 1007 aaPredicted RBP17.99■□□□□ 0.47
NSMCE1-201ENST00000361439 HEG1Q9ULI3 1381 aa17.99■□□□□ 0.47
NSMCE1-201ENST00000361439 UBR2Q8IWV8 1755 aa17.99■□□□□ 0.47
NSMCE1-201ENST00000361439 CICQ96RK0 1608 aaPredicted RBP17.98■□□□□ 0.47
NSMCE1-201ENST00000361439 EIF4A1P60842 406 aaKnown RBP17.98■□□□□ 0.47
NSMCE1-201ENST00000361439 GOLGA2Q08379 1002 aa17.98■□□□□ 0.47
NSMCE1-201ENST00000361439 LRRC4BQ9NT99 713 aa17.98■□□□□ 0.47
NSMCE1-201ENST00000361439 MIS18AQ9NYP9 233 aa17.98■□□□□ 0.47
NSMCE1-201ENST00000361439 KDM3BQ7LBC6 1761 aa17.98■□□□□ 0.47
NSMCE1-201ENST00000361439 RREB1Q92766 1687 aa17.97■□□□□ 0.47
NSMCE1-201ENST00000361439 SNRPA1P09661 255 aaKnown RBP17.97■□□□□ 0.47
NSMCE1-201ENST00000361439 HNRNPUQ00839 825 aaKnown RBP eCLIP17.97■□□□□ 0.47
NSMCE1-201ENST00000361439 SLC4A9Q96Q91 983 aa17.97■□□□□ 0.47
NSMCE1-201ENST00000361439 MYH16Q9H6N6 1097 aa17.97■□□□□ 0.47
NSMCE1-201ENST00000361439 MBIPQ9NS73 344 aa17.97■□□□□ 0.47
NSMCE1-201ENST00000361439 LAS1LQ9Y4W2 734 aaKnown RBP17.97■□□□□ 0.47
NSMCE1-201ENST00000361439 SOS1Q07889 1333 aaPredicted RBP17.97■□□□□ 0.47
NSMCE1-201ENST00000361439 E9PSI1 815 aa17.96■□□□□ 0.47
NSMCE1-201ENST00000361439 KCNQ3O43525 872 aa17.96■□□□□ 0.47
NSMCE1-201ENST00000361439 HOXB7P09629 217 aa17.96■□□□□ 0.47
NSMCE1-201ENST00000361439 NBPF14Q5TI25 921 aa17.96■□□□□ 0.47
NSMCE1-201ENST00000361439 CHMP4AQ9BY43 222 aa17.96■□□□□ 0.47
NSMCE1-201ENST00000361439 ZBED9Q6R2W3 1325 aa17.96■□□□□ 0.46
NSMCE1-201ENST00000361439 SENP3-EIF4A1A0A087X0R7 540 aa17.95■□□□□ 0.46
NSMCE1-201ENST00000361439 GIGYF1O75420 1035 aaPredicted RBP17.95■□□□□ 0.46
NSMCE1-201ENST00000361439 STARD3NLO95772 234 aa17.95■□□□□ 0.46
NSMCE1-201ENST00000361439 RC3H1Q5TC82 1133 aaKnown RBP17.95■□□□□ 0.46
NSMCE1-201ENST00000361439 ITPK1Q13572 414 aa17.94■□□□□ 0.46
NSMCE1-201ENST00000361439 CNTNAP4Q9C0A0 1308 aa17.93■□□□□ 0.46
NSMCE1-201ENST00000361439 C5P01031 1676 aa17.93■□□□□ 0.46
NSMCE1-201ENST00000361439 LINC00116Q8NCU8 138 aa17.92■□□□□ 0.46
NSMCE1-201ENST00000361439 FANCIQ9NVI1 1328 aa17.92■□□□□ 0.46
NSMCE1-201ENST00000361439 CYP19A1P11511 503 aaPredicted RBP17.91■□□□□ 0.46
NSMCE1-201ENST00000361439 SLFN5Q08AF3 891 aa17.91■□□□□ 0.46
NSMCE1-201ENST00000361439 DNAJC10Q8IXB1 793 aa17.91■□□□□ 0.46
NSMCE1-201ENST00000361439 AKT1S1Q96B36 256 aa17.91■□□□□ 0.46
NSMCE1-201ENST00000361439 STK32BQ9NY57 414 aa17.91■□□□□ 0.46
NSMCE1-201ENST00000361439 NUP188Q5SRE5 1749 aa17.91■□□□□ 0.46
NSMCE1-201ENST00000361439 KCNQ4P56696 695 aa17.9■□□□□ 0.46
NSMCE1-201ENST00000361439 SLC15A2Q16348 729 aa17.9■□□□□ 0.46
NSMCE1-201ENST00000361439 TRMT2AQ8IZ69 625 aaKnown RBP17.9■□□□□ 0.46
NSMCE1-201ENST00000361439 SPINK5Q9NQ38 1064 aaPredicted RBP17.9■□□□□ 0.46
NSMCE1-201ENST00000361439 TAF1LQ8IZX4 1826 aa17.89■□□□□ 0.45
NSMCE1-201ENST00000361439 CRKLP46109 303 aaKnown RBP17.89■□□□□ 0.45
NSMCE1-201ENST00000361439 FLAD1Q8NFF5 587 aa17.89■□□□□ 0.45
NSMCE1-201ENST00000361439 TSR2Q969E8 191 aaKnown RBP17.89■□□□□ 0.45
NSMCE1-201ENST00000361439 AK7Q96M32 723 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms